RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 RPSAP08865 295 aaKnown RBP5.04□□□□□ -1.6
PTPRD-203ENST00000381196 UQCRBP14927 111 aa5.04□□□□□ -1.6
PTPRD-203ENST00000381196 CPB1P15086 417 aa5.04□□□□□ -1.6
PTPRD-203ENST00000381196 NFIAQ12857 509 aa5.04□□□□□ -1.6
PTPRD-203ENST00000381196 SF3A3Q12874 501 aaKnown RBP eCLIP5.04□□□□□ -1.6
PTPRD-203ENST00000381196 PTK6Q13882 451 aa5.04□□□□□ -1.6
PTPRD-203ENST00000381196 COG2Q14746 738 aa5.04□□□□□ -1.6
PTPRD-203ENST00000381196 C11orf88Q6PI97 169 aa5.04□□□□□ -1.6
PTPRD-203ENST00000381196 STOX1Q6ZVD7 989 aa5.04□□□□□ -1.6
PTPRD-203ENST00000381196 SCN4BQ8IWT1 228 aa5.04□□□□□ -1.6
PTPRD-203ENST00000381196 UNC5BQ8IZJ1 945 aa5.04□□□□□ -1.6
PTPRD-203ENST00000381196 NLRP4Q96MN2 994 aa5.04□□□□□ -1.6
PTPRD-203ENST00000381196 ZIM3Q96PE6 472 aa5.04□□□□□ -1.6
PTPRD-203ENST00000381196 ZSWIM1Q9BR11 485 aa5.04□□□□□ -1.6
PTPRD-203ENST00000381196 OR2B2Q9GZK3 357 aa5.04□□□□□ -1.6
PTPRD-203ENST00000381196 CDH19Q9H159 772 aa5.04□□□□□ -1.6
PTPRD-203ENST00000381196 CLK4Q9HAZ1 481 aaKnown RBP5.04□□□□□ -1.6
PTPRD-203ENST00000381196 GBA2Q9HCG7 927 aaPredicted RBP5.04□□□□□ -1.6
PTPRD-203ENST00000381196 CCDC85CA6NKD9 419 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 KCNQ2O43526 872 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 TSPAN9O75954 239 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 EPN2O95208 641 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 GYPCP04921 128 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 RASA1P20936 1047 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 SLC16A2P36021 539 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 ZNF844Q08AG5 666 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 KCNMA1Q12791 1236 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 INSCQ1MX18 579 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 ZC3H12BQ5HYM0 836 aaKnown RBP5.03□□□□□ -1.6
PTPRD-203ENST00000381196 ANGEL2Q5VTE6 544 aaKnown RBP5.03□□□□□ -1.6
PTPRD-203ENST00000381196 TTC23Q5W5X9 447 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 FAM117BQ6P1L5 589 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 SMYD4Q8IYR2 804 aaPredicted RBP5.03□□□□□ -1.6
PTPRD-203ENST00000381196 GPRC5AQ8NFJ5 357 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 SRPK1Q96SB4 655 aaKnown RBP5.03□□□□□ -1.6
PTPRD-203ENST00000381196 TRMOQ9BU70 441 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 AVENQ9NQS1 362 aaPredicted RBP5.03□□□□□ -1.6
PTPRD-203ENST00000381196 RIC8BQ9NVN3 520 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 UBP1Q9NZI7 540 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 CCDC88CQ9P219 2028 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 MSH3P20585 1137 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 PIK3CBP42338 1070 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 KPNA1P52294 538 aaPredicted RBP5.03□□□□□ -1.6
PTPRD-203ENST00000381196 PTH1RQ03431 593 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 LRRC24Q50LG9 513 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 ZNF544Q6NX49 715 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 CMTR1Q8N1G2 835 aaKnown RBP5.03□□□□□ -1.6
PTPRD-203ENST00000381196 PLD6Q8N2A8 252 aaKnown RBP5.03□□□□□ -1.6
PTPRD-203ENST00000381196 MCPH1Q8NEM0 835 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 IL17REQ8NFR9 667 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 SPATA33Q96N06 139 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 SLC6A15Q9H2J7 730 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 ASNSD1Q9NWL6 643 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 DNAJC6O75061 913 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 WBP4O75554 376 aaKnown RBP5.03□□□□□ -1.6
PTPRD-203ENST00000381196 SRP72O76094 671 aaKnown RBP5.03□□□□□ -1.6
PTPRD-203ENST00000381196 CPA1P15085 419 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 MAPK9P45984 424 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 ZCCHC9Q8N567 271 aaKnown RBP5.03□□□□□ -1.6
PTPRD-203ENST00000381196 VPS33AQ96AX1 596 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 SH3KBP1Q96B97 665 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 MFSD1Q9H3U5 465 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 PIGUQ9H490 435 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 TDRD3Q9H7E2 651 aaKnown RBP5.03□□□□□ -1.6
PTPRD-203ENST00000381196 DOLKQ9UPQ8 538 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 SSTR3P32745 418 aaPredicted RBP5.03□□□□□ -1.6
PTPRD-203ENST00000381196 SCARA3Q6AZY7 606 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 ABRAXAS1Q6UWZ7 409 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 ZNF467Q7Z7K2 595 aaPredicted RBP5.03□□□□□ -1.6
PTPRD-203ENST00000381196 NUDCD3Q8IVD9 361 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 SFRP1Q8N474 314 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 RNASE11Q8TAA1 199 aaKnown RBP5.03□□□□□ -1.6
PTPRD-203ENST00000381196 RAPGEF5Q92565 580 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 TNIP3Q96KP6 325 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 RNF145Q96MT1 663 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 PDZK1P1A8MUH7 402 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 ANXA6P08133 673 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 FOSL1P15407 271 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 PTPN7P35236 360 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 NR2C2P49116 596 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 GABARAPL2P60520 117 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 KRT17Q04695 432 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 PTGDRQ13258 359 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 TRIM28Q13263 835 aaKnown RBP5.03□□□□□ -1.6
PTPRD-203ENST00000381196 NFIXQ14938 502 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 NFRKBQ6P4R8 1299 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 ARRDC4Q8NCT1 418 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 GLT1D1Q96MS3 346 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 MSTO1Q9BUK6 570 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 SLC24A3Q9HC58 644 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 SLC30A1Q9Y6M5 507 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 CARNS1A5YM72 827 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 CENPXA8MT69 81 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 TOP3BO95985 862 aaKnown RBP5.03□□□□□ -1.6
PTPRD-203ENST00000381196 ARL4AP40617 200 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 BTBD8Q5XKL5 378 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 TXNDC11Q6PKC3 985 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 LHFPL3Q86UP9 236 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 MYO1HQ8N1T3 1032 aa5.03□□□□□ -1.6
PTPRD-203ENST00000381196 PPM1KQ8N3J5 372 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms