RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 ACOT2P49753 483 aa14.38□□□□□ -0.11
SDC1-202ENST00000381150 WNT7BP56706 349 aa14.38□□□□□ -0.11
SDC1-202ENST00000381150 CNGA3Q16281 694 aa14.38□□□□□ -0.11
SDC1-202ENST00000381150 SEZ6Q53EL9 994 aa14.38□□□□□ -0.11
SDC1-202ENST00000381150 BSPRYQ5W0U4 402 aa14.38□□□□□ -0.11
SDC1-202ENST00000381150 TRIM67Q6ZTA4 783 aa14.38□□□□□ -0.11
SDC1-202ENST00000381150 NET1Q7Z628 596 aaPredicted RBP14.38□□□□□ -0.11
SDC1-202ENST00000381150 MCPH1Q8NEM0 835 aa14.38□□□□□ -0.11
SDC1-202ENST00000381150 HSPH1Q92598 858 aa14.38□□□□□ -0.11
SDC1-202ENST00000381150 ACAD9Q9H845 621 aa14.38□□□□□ -0.11
SDC1-202ENST00000381150 ADAMTS6Q9UKP5 1117 aa14.38□□□□□ -0.11
SDC1-202ENST00000381150 SIP14410 1827 aa14.38□□□□□ -0.11
SDC1-202ENST00000381150 C15orf38-AP3S2A0A0A6YYH1 394 aa14.38□□□□□ -0.11
SDC1-202ENST00000381150 TM9SF1O15321 606 aa14.38□□□□□ -0.11
SDC1-202ENST00000381150 STAM2O75886 525 aa14.38□□□□□ -0.11
SDC1-202ENST00000381150 ASLP04424 464 aa14.38□□□□□ -0.11
SDC1-202ENST00000381150 FOLH1Q04609 750 aa14.38□□□□□ -0.11
SDC1-202ENST00000381150 MAMLD1Q13495 774 aa14.38□□□□□ -0.11
SDC1-202ENST00000381150 PDE1CQ14123 709 aaPredicted RBP14.38□□□□□ -0.11
SDC1-202ENST00000381150 KCTD21Q4G0X4 260 aa14.38□□□□□ -0.11
SDC1-202ENST00000381150 C16orf46Q6P387 395 aa14.38□□□□□ -0.11
SDC1-202ENST00000381150 ARPINQ7Z6K5 226 aa14.38□□□□□ -0.11
SDC1-202ENST00000381150 SESTD1Q86VW0 696 aa14.38□□□□□ -0.11
SDC1-202ENST00000381150 DEFB107AQ8IZN7 70 aa14.38□□□□□ -0.11
SDC1-202ENST00000381150 GPD1LQ8N335 351 aa14.38□□□□□ -0.11
SDC1-202ENST00000381150 ALLCQ8N6M5 410 aa14.38□□□□□ -0.11
SDC1-202ENST00000381150 ERLEC1Q96DZ1 483 aa14.38□□□□□ -0.11
SDC1-202ENST00000381150 MAF1Q9H063 256 aa14.38□□□□□ -0.11
SDC1-202ENST00000381150 STYXL1Q9Y6J8 313 aa14.38□□□□□ -0.11
SDC1-202ENST00000381150 XPO1O14980 1071 aaKnown RBP14.37□□□□□ -0.11
SDC1-202ENST00000381150 PSMD6Q15008 389 aa14.37□□□□□ -0.11
SDC1-202ENST00000381150 DNAL1Q4LDG9 190 aa14.37□□□□□ -0.11
SDC1-202ENST00000381150 NOL9Q5SY16 702 aaKnown RBP14.37□□□□□ -0.11
SDC1-202ENST00000381150 RNASEH2BQ5TBB1 312 aaKnown RBP14.37□□□□□ -0.11
SDC1-202ENST00000381150 RFX6Q8HWS3 928 aa14.37□□□□□ -0.11
SDC1-202ENST00000381150 CDHR1Q96JP9 859 aa14.37□□□□□ -0.11
SDC1-202ENST00000381150 SGIP1Q9BQI5 828 aa14.37□□□□□ -0.11
SDC1-202ENST00000381150 MRPL1Q9BYD6 325 aaKnown RBP14.37□□□□□ -0.11
SDC1-202ENST00000381150 HAPLN2Q9GZV7 340 aa14.37□□□□□ -0.11
SDC1-202ENST00000381150 ARHGEF38Q9NXL2 777 aa14.37□□□□□ -0.11
SDC1-202ENST00000381150 MAFBQ9Y5Q3 323 aaPredicted RBP14.37□□□□□ -0.11
SDC1-202ENST00000381150 TCN1P20061 433 aaPredicted RBP14.37□□□□□ -0.11
SDC1-202ENST00000381150 PRKD1Q15139 912 aaPredicted RBP14.37□□□□□ -0.11
SDC1-202ENST00000381150 DNAJC24Q6P3W2 148 aa14.37□□□□□ -0.11
SDC1-202ENST00000381150 APOBEC3FQ8IUX4 373 aaKnown RBP14.37□□□□□ -0.11
SDC1-202ENST00000381150 IGDCC3Q8IVU1 814 aa14.37□□□□□ -0.11
SDC1-202ENST00000381150 EXD1Q8NHP7 514 aa14.37□□□□□ -0.11
SDC1-202ENST00000381150 ZNF398Q8TD17 642 aa14.37□□□□□ -0.11
SDC1-202ENST00000381150 HSPBAP1Q96EW2 488 aa14.37□□□□□ -0.11
SDC1-202ENST00000381150 S100A14Q9HCY8 104 aa14.37□□□□□ -0.11
SDC1-202ENST00000381150 ZSCAN9O15535 394 aaPredicted RBP14.37□□□□□ -0.11
SDC1-202ENST00000381150 DGKIO75912 1065 aa14.37□□□□□ -0.11
SDC1-202ENST00000381150 SUPT20HL2P0C7V6 817 aa14.37□□□□□ -0.11
SDC1-202ENST00000381150 UQCRBP14927 111 aa14.37□□□□□ -0.11
SDC1-202ENST00000381150 ICAM3P32942 547 aa14.37□□□□□ -0.11
SDC1-202ENST00000381150 VCPP55072 806 aaKnown RBP14.37□□□□□ -0.11
SDC1-202ENST00000381150 SUPT20HL1Q3ZLR7 823 aa14.37□□□□□ -0.11
SDC1-202ENST00000381150 SH3D19Q5HYK7 790 aa14.37□□□□□ -0.11
SDC1-202ENST00000381150 EFHC2Q5JST6 749 aa14.37□□□□□ -0.11
SDC1-202ENST00000381150 SPOCD1Q6ZMY3 1216 aa14.37□□□□□ -0.11
SDC1-202ENST00000381150 NDUFAF2Q8N183 169 aa14.37□□□□□ -0.11
SDC1-202ENST00000381150 FAM81BQ96LP2 452 aa14.37□□□□□ -0.11
SDC1-202ENST00000381150 SEPT9Q9UHD8 586 aaPredicted RBP14.37□□□□□ -0.11
SDC1-202ENST00000381150 INPP5FQ9Y2H2 1132 aa14.37□□□□□ -0.11
SDC1-202ENST00000381150 PTPRFP10586 1907 aa14.37□□□□□ -0.11
SDC1-202ENST00000381150 TMEM63AO94886 807 aa14.36□□□□□ -0.11
SDC1-202ENST00000381150 FUT4P22083 530 aa14.36□□□□□ -0.11
SDC1-202ENST00000381150 XKR3Q5GH77 459 aa14.36□□□□□ -0.11
SDC1-202ENST00000381150 VWA5B1Q5TIE3 1220 aa14.36□□□□□ -0.11
SDC1-202ENST00000381150 ACAD11Q709F0 780 aa14.36□□□□□ -0.11
SDC1-202ENST00000381150 TDRPQ86YL5 185 aa14.36□□□□□ -0.11
SDC1-202ENST00000381150 APOPT1Q96IL0 206 aa14.36□□□□□ -0.11
SDC1-202ENST00000381150 SLITRK1Q96PX8 696 aa14.36□□□□□ -0.11
SDC1-202ENST00000381150 POLR3FQ9H1D9 316 aaPredicted RBP14.36□□□□□ -0.11
SDC1-202ENST00000381150 HOXC10Q9NYD6 342 aa14.36□□□□□ -0.11
SDC1-202ENST00000381150 TMCO1Q9UM00 188 aa14.36□□□□□ -0.11
SDC1-202ENST00000381150 PCDHGB4Q9UN71 923 aa14.36□□□□□ -0.11
SDC1-202ENST00000381150 SOX13Q9UN79 622 aa14.36□□□□□ -0.11
SDC1-202ENST00000381150 DTNAQ9Y4J8 743 aa14.36□□□□□ -0.11
SDC1-202ENST00000381150 PCDHB2Q9Y5E7 798 aa14.36□□□□□ -0.11
SDC1-202ENST00000381150 PCDHGB5Q9Y5G0 923 aa14.36□□□□□ -0.11
SDC1-202ENST00000381150 MYPNQ86TC9 1320 aa14.36□□□□□ -0.11
SDC1-202ENST00000381150 TCRBV9S1A1TA0A576 114 aa14.36□□□□□ -0.11
SDC1-202ENST00000381150 PIK3R2O00459 728 aa14.36□□□□□ -0.11
SDC1-202ENST00000381150 UGT1A9O60656 530 aa14.36□□□□□ -0.11
SDC1-202ENST00000381150 TMCC1O94876 653 aa14.36□□□□□ -0.11
SDC1-202ENST00000381150 CHN2P52757 468 aa14.36□□□□□ -0.11
SDC1-202ENST00000381150 GCNT1Q02742 428 aa14.36□□□□□ -0.11
SDC1-202ENST00000381150 GK3PQ14409 553 aa14.36□□□□□ -0.11
SDC1-202ENST00000381150 CASC4Q6P4E1 433 aa14.36□□□□□ -0.11
SDC1-202ENST00000381150 C1orf228Q6PIY5 440 aa14.36□□□□□ -0.11
SDC1-202ENST00000381150 SCARA5Q6ZMJ2 495 aa14.36□□□□□ -0.11
SDC1-202ENST00000381150 PPIL6Q8IXY8 311 aa14.36□□□□□ -0.11
SDC1-202ENST00000381150 FEZF2Q8TBJ5 459 aa14.36□□□□□ -0.11
SDC1-202ENST00000381150 CPT1BQ92523 772 aa14.36□□□□□ -0.11
SDC1-202ENST00000381150 PLEKHG4BQ96PX9 1271 aa14.36□□□□□ -0.11
SDC1-202ENST00000381150 DHX33Q9H6R0 707 aaKnown RBP14.36□□□□□ -0.11
SDC1-202ENST00000381150 UGT1A7Q9HAW7 530 aa14.36□□□□□ -0.11
SDC1-202ENST00000381150 UGT1A10Q9HAW8 530 aa14.36□□□□□ -0.11
SDC1-202ENST00000381150 UGT1A8Q9HAW9 530 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms