RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 USP29Q9HBJ7 922 aa8.3□□□□□ -1.08
PDLIM5-204ENST00000380176 PCDH18Q9HCL0 1135 aa8.3□□□□□ -1.08
PDLIM5-204ENST00000380176 CACNG4Q9UBN1 327 aa8.3□□□□□ -1.08
PDLIM5-204ENST00000380176 ZMYND8Q9ULU4 1186 aaPredicted RBP8.3□□□□□ -1.08
PDLIM5-204ENST00000380176 ZNF236Q9UL36 1845 aa8.3□□□□□ -1.08
PDLIM5-204ENST00000380176 KPNA7A9QM74 516 aa8.3□□□□□ -1.08
PDLIM5-204ENST00000380176 E7ESA3 106 aa8.3□□□□□ -1.08
PDLIM5-204ENST00000380176 AVILO75366 819 aa8.3□□□□□ -1.08
PDLIM5-204ENST00000380176 MYL3P08590 195 aa8.3□□□□□ -1.08
PDLIM5-204ENST00000380176 LCP1P13796 627 aa8.3□□□□□ -1.08
PDLIM5-204ENST00000380176 SDC4P31431 198 aa8.3□□□□□ -1.08
PDLIM5-204ENST00000380176 PSEN2P49810 448 aa8.3□□□□□ -1.08
PDLIM5-204ENST00000380176 BBS9Q3SYG4 887 aa8.3□□□□□ -1.08
PDLIM5-204ENST00000380176 PPP6R3Q5H9R7 873 aaPredicted RBP8.3□□□□□ -1.08
PDLIM5-204ENST00000380176 CST9Q5W186 159 aa8.3□□□□□ -1.08
PDLIM5-204ENST00000380176 CGB2Q6NT52 195 aa8.3□□□□□ -1.08
PDLIM5-204ENST00000380176 TDRPQ86YL5 185 aa8.3□□□□□ -1.08
PDLIM5-204ENST00000380176 AGGF1Q8N302 714 aaeCLIP8.3□□□□□ -1.08
PDLIM5-204ENST00000380176 C2orf69Q8N8R5 385 aa8.3□□□□□ -1.08
PDLIM5-204ENST00000380176 NDRG1Q92597 394 aaKnown RBP8.3□□□□□ -1.08
PDLIM5-204ENST00000380176 TGS1Q96RS0 853 aaKnown RBP8.3□□□□□ -1.08
PDLIM5-204ENST00000380176 TRABDQ9H4I3 376 aa8.3□□□□□ -1.08
PDLIM5-204ENST00000380176 FAM124BQ9H5Z6 455 aaPredicted RBP8.3□□□□□ -1.08
PDLIM5-204ENST00000380176 SAMD15Q9P1V8 674 aa8.3□□□□□ -1.08
PDLIM5-204ENST00000380176 HESX1Q9UBX0 185 aa8.3□□□□□ -1.08
PDLIM5-204ENST00000380176 GRID1Q9ULK0 1009 aa8.3□□□□□ -1.08
PDLIM5-204ENST00000380176 MYO18AQ92614 2054 aaKnown RBP8.3□□□□□ -1.08
PDLIM5-204ENST00000380176 CCT8L1PA6NM43 557 aa8.29□□□□□ -1.08
PDLIM5-204ENST00000380176 H7C0C1 242 aa8.29□□□□□ -1.08
PDLIM5-204ENST00000380176 HAS3O00219 553 aa8.29□□□□□ -1.08
PDLIM5-204ENST00000380176 PEX14O75381 377 aa8.29□□□□□ -1.08
PDLIM5-204ENST00000380176 OAS1P00973 400 aaKnown RBP8.29□□□□□ -1.08
PDLIM5-204ENST00000380176 KRT15P19012 456 aa8.29□□□□□ -1.08
PDLIM5-204ENST00000380176 CYP2B6P20813 491 aa8.29□□□□□ -1.08
PDLIM5-204ENST00000380176 RBL1P28749 1068 aa8.29□□□□□ -1.08
PDLIM5-204ENST00000380176 STX2P32856 288 aa8.29□□□□□ -1.08
PDLIM5-204ENST00000380176 RPA3P35244 121 aaPredicted RBP8.29□□□□□ -1.08
PDLIM5-204ENST00000380176 GNL1P36915 607 aaPredicted RBP8.29□□□□□ -1.08
PDLIM5-204ENST00000380176 ATP5OP48047 213 aa8.29□□□□□ -1.08
PDLIM5-204ENST00000380176 ARL4CP56559 192 aa8.29□□□□□ -1.08
PDLIM5-204ENST00000380176 FAXCQ5TGI0 409 aa8.29□□□□□ -1.08
PDLIM5-204ENST00000380176 RIBC1Q8N443 379 aaPredicted RBP8.29□□□□□ -1.08
PDLIM5-204ENST00000380176 SMG8Q8ND04 991 aaKnown RBP8.29□□□□□ -1.08
PDLIM5-204ENST00000380176 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.29□□□□□ -1.08
PDLIM5-204ENST00000380176 FBF1Q8TES7 1133 aa8.29□□□□□ -1.08
PDLIM5-204ENST00000380176 PAIP2Q9BPZ3 127 aaKnown RBP8.29□□□□□ -1.08
PDLIM5-204ENST00000380176 RRAGCQ9HB90 399 aa8.29□□□□□ -1.08
PDLIM5-204ENST00000380176 ABCF3Q9NUQ8 709 aa8.29□□□□□ -1.08
PDLIM5-204ENST00000380176 UBQLN1Q9UMX0 589 aaKnown RBP8.29□□□□□ -1.08
PDLIM5-204ENST00000380176 CHMP2BQ9UQN3 213 aa8.29□□□□□ -1.08
PDLIM5-204ENST00000380176 ACTL7BQ9Y614 415 aa8.29□□□□□ -1.08
PDLIM5-204ENST00000380176 TRPM7Q96QT4 1865 aa8.29□□□□□ -1.08
PDLIM5-204ENST00000380176 FAM47DPA6NHR8 397 aa8.29□□□□□ -1.08
PDLIM5-204ENST00000380176 MEIS3P2A8K0S8 358 aa8.29□□□□□ -1.08
PDLIM5-204ENST00000380176 KCNN4O15554 427 aa8.29□□□□□ -1.08
PDLIM5-204ENST00000380176 TKTP29401 623 aaKnown RBP8.29□□□□□ -1.08
PDLIM5-204ENST00000380176 SCTRP47872 440 aa8.29□□□□□ -1.08
PDLIM5-204ENST00000380176 FKBP1BP68106 108 aa8.29□□□□□ -1.08
PDLIM5-204ENST00000380176 ITIH4Q14624 930 aa8.29□□□□□ -1.08
PDLIM5-204ENST00000380176 LACTB2Q53H82 288 aaPredicted RBP8.29□□□□□ -1.08
PDLIM5-204ENST00000380176 EFHC2Q5JST6 749 aa8.29□□□□□ -1.08
PDLIM5-204ENST00000380176 ARHGAP17Q68EM7 881 aa8.29□□□□□ -1.08
PDLIM5-204ENST00000380176 ARHGEF18Q6ZSZ5 1173 aa8.29□□□□□ -1.08
PDLIM5-204ENST00000380176 UNC93AQ86WB7 457 aa8.29□□□□□ -1.08
PDLIM5-204ENST00000380176 SLC2A14Q8TDB8 520 aa8.29□□□□□ -1.08
PDLIM5-204ENST00000380176 DENND1AQ8TEH3 1009 aa8.29□□□□□ -1.08
PDLIM5-204ENST00000380176 TSPAN18Q96SJ8 248 aa8.29□□□□□ -1.08
PDLIM5-204ENST00000380176 C11orf84Q9BUA3 381 aaPredicted RBP8.29□□□□□ -1.08
PDLIM5-204ENST00000380176 IPPQ9Y573 584 aa8.29□□□□□ -1.08
PDLIM5-204ENST00000380176 NR2E3Q9Y5X4 410 aa8.29□□□□□ -1.08
PDLIM5-204ENST00000380176 H0YHG0 523 aa8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 SETSIPP0DME0 302 aa8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 TAC1P20366 129 aa8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 STIP1P31948 543 aaKnown RBP8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 GEMIN4P57678 1058 aaKnown RBP8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 CDC42EP1Q00587 391 aa8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 SLC10A2Q12908 348 aaPredicted RBP8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 MTA1Q13330 715 aa8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 TFDP2Q14188 446 aa8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 KCNJ11Q14654 390 aa8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 BOLA3Q53S33 107 aa8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 FAM47CQ5HY64 1035 aa8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 SLC9A4Q6AI14 798 aa8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 APBB1IPQ7Z5R6 666 aaPredicted RBP8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 OSTM1Q86WC4 334 aa8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 CRYBG2Q8N1P7 616 aa8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 ANKS4BQ8N8V4 417 aa8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 ANKRD52Q8NB46 1076 aa8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 PRR7Q8TB68 274 aa8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 MAGEB18Q96M61 343 aa8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 ZFP42Q96MM3 310 aa8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 C12orf65Q9H3J6 166 aaKnown RBP8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 NKIRAS1Q9NYS0 192 aa8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 MFHAS1Q9Y4C4 1052 aa8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 MYADML2A6NDP7 307 aa8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 CLDN5O00501 218 aa8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 APOL1O14791 398 aa8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 BEST1O76090 585 aa8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 ASMTLO95671 621 aa8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 L1CAMP32004 1257 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms