RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 HIF1AQ16665 826 aa10.91□□□□□ -0.66
POLR2J3-201ENST00000379340 CDO1Q16878 200 aa10.91□□□□□ -0.66
POLR2J3-201ENST00000379340 SLC9A4Q6AI14 798 aa10.91□□□□□ -0.66
POLR2J3-201ENST00000379340 STRADAQ7RTN6 431 aa10.91□□□□□ -0.66
POLR2J3-201ENST00000379340 PRUNE1Q86TP1 453 aa10.91□□□□□ -0.66
POLR2J3-201ENST00000379340 PSTKQ8IV42 348 aaKnown RBP10.91□□□□□ -0.66
POLR2J3-201ENST00000379340 TMEM86AQ8N2M4 240 aa10.91□□□□□ -0.66
POLR2J3-201ENST00000379340 NAT8LQ8N9F0 302 aa10.91□□□□□ -0.66
POLR2J3-201ENST00000379340 ATXN2LQ8WWM7 1075 aaKnown RBP10.91□□□□□ -0.66
POLR2J3-201ENST00000379340 CPT1BQ92523 772 aa10.91□□□□□ -0.66
POLR2J3-201ENST00000379340 KHSRPQ92945 711 aaKnown RBP eCLIP10.91□□□□□ -0.66
POLR2J3-201ENST00000379340 RTP4Q96DX8 246 aa10.91□□□□□ -0.66
POLR2J3-201ENST00000379340 PIWIL1Q96J94 861 aaKnown RBP10.91□□□□□ -0.66
POLR2J3-201ENST00000379340 C9orf72Q96LT7 481 aa10.91□□□□□ -0.66
POLR2J3-201ENST00000379340 C11orf84Q9BUA3 381 aaPredicted RBP10.91□□□□□ -0.66
POLR2J3-201ENST00000379340 SNRNP25Q9BV90 132 aaKnown RBP10.91□□□□□ -0.66
POLR2J3-201ENST00000379340 NSRP1Q9H0G5 558 aaKnown RBP10.91□□□□□ -0.66
POLR2J3-201ENST00000379340 RNF39Q9H2S5 420 aa10.91□□□□□ -0.66
POLR2J3-201ENST00000379340 PCDH18Q9HCL0 1135 aa10.91□□□□□ -0.66
POLR2J3-201ENST00000379340 DNAJC17Q9NVM6 304 aaKnown RBP10.91□□□□□ -0.66
POLR2J3-201ENST00000379340 EURLQ9NYK6 297 aa10.91□□□□□ -0.66
POLR2J3-201ENST00000379340 KLK14Q9P0G3 267 aa10.91□□□□□ -0.66
POLR2J3-201ENST00000379340 SENP1Q9P0U3 644 aa10.91□□□□□ -0.66
POLR2J3-201ENST00000379340 PAK5Q9P286 719 aa10.91□□□□□ -0.66
POLR2J3-201ENST00000379340 SLC24A2Q9UI40 661 aa10.91□□□□□ -0.66
POLR2J3-201ENST00000379340 CDY2AQ9Y6F7 541 aa10.91□□□□□ -0.66
POLR2J3-201ENST00000379340 EXOC1LA0A1B0GW35 172 aa10.9□□□□□ -0.66
POLR2J3-201ENST00000379340 PIK3R2O00459 728 aa10.9□□□□□ -0.66
POLR2J3-201ENST00000379340 PTGESO14684 152 aa10.9□□□□□ -0.66
POLR2J3-201ENST00000379340 DAB1O75553 588 aa10.9□□□□□ -0.66
POLR2J3-201ENST00000379340 GRAP2O75791 330 aa10.9□□□□□ -0.66
POLR2J3-201ENST00000379340 ZNF189O75820 626 aaPredicted RBP10.9□□□□□ -0.66
POLR2J3-201ENST00000379340 KIAA0754O94854 1291 aa10.9□□□□□ -0.66
POLR2J3-201ENST00000379340 CCDC130P13994 396 aa10.9□□□□□ -0.66
POLR2J3-201ENST00000379340 ATP2A2P16615 1042 aaKnown RBP10.9□□□□□ -0.66
POLR2J3-201ENST00000379340 RAB27AP51159 221 aa10.9□□□□□ -0.66
POLR2J3-201ENST00000379340 GDF10P55107 478 aa10.9□□□□□ -0.66
POLR2J3-201ENST00000379340 CORO7P57737 925 aa10.9□□□□□ -0.66
POLR2J3-201ENST00000379340 IRX5P78411 483 aaPredicted RBP10.9□□□□□ -0.66
POLR2J3-201ENST00000379340 ATP11AP98196 1134 aa10.9□□□□□ -0.66
POLR2J3-201ENST00000379340 SOX4Q06945 474 aaPredicted RBP10.9□□□□□ -0.66
POLR2J3-201ENST00000379340 PDIA2Q13087 525 aaKnown RBP10.9□□□□□ -0.66
POLR2J3-201ENST00000379340 XRCC4Q13426 336 aa10.9□□□□□ -0.66
POLR2J3-201ENST00000379340 DPYSL2Q16555 572 aa10.9□□□□□ -0.66
POLR2J3-201ENST00000379340 ANKRD20A8PQ5CZ79 823 aa10.9□□□□□ -0.66
POLR2J3-201ENST00000379340 GNASQ5JWF2 1037 aa10.9□□□□□ -0.66
POLR2J3-201ENST00000379340 SH3PXD2AQ5TCZ1 1133 aa10.9□□□□□ -0.66
POLR2J3-201ENST00000379340 SCYL2Q6P3W7 929 aa10.9□□□□□ -0.66
POLR2J3-201ENST00000379340 DARS2Q6PI48 645 aaKnown RBP10.9□□□□□ -0.66
POLR2J3-201ENST00000379340 TADA2BQ86TJ2 420 aa10.9□□□□□ -0.66
POLR2J3-201ENST00000379340 CDKL3Q8IVW4 592 aaPredicted RBP10.9□□□□□ -0.66
POLR2J3-201ENST00000379340 UNC45BQ8IWX7 931 aa10.9□□□□□ -0.66
POLR2J3-201ENST00000379340 SCUBE3Q8IX30 993 aa10.9□□□□□ -0.66
POLR2J3-201ENST00000379340 PDIK1LQ8N165 341 aa10.9□□□□□ -0.66
POLR2J3-201ENST00000379340 ATP11CQ8NB49 1132 aa10.9□□□□□ -0.66
POLR2J3-201ENST00000379340 B3GALNT2Q8NCR0 500 aa10.9□□□□□ -0.66
POLR2J3-201ENST00000379340 SLC2A14Q8TDB8 520 aa10.9□□□□□ -0.66
POLR2J3-201ENST00000379340 KCTD13Q8WZ19 329 aa10.9□□□□□ -0.66
POLR2J3-201ENST00000379340 PWWP2AQ96N64 755 aa10.9□□□□□ -0.66
POLR2J3-201ENST00000379340 DUSP16Q9BY84 665 aa10.9□□□□□ -0.66
POLR2J3-201ENST00000379340 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.9□□□□□ -0.66
POLR2J3-201ENST00000379340 RCOR3Q9P2K3 495 aaPredicted RBP10.9□□□□□ -0.66
POLR2J3-201ENST00000379340 GIT1Q9Y2X7 761 aa10.9□□□□□ -0.66
POLR2J3-201ENST00000379340 FAM169AQ9Y6X4 670 aa10.9□□□□□ -0.66
POLR2J3-201ENST00000379340 BCLAF3A2AJT9 711 aaKnown RBP10.9□□□□□ -0.67
POLR2J3-201ENST00000379340 H7C0C1 242 aa10.9□□□□□ -0.67
POLR2J3-201ENST00000379340 MYO1CO00159 1063 aa10.9□□□□□ -0.67
POLR2J3-201ENST00000379340 CYB561D2O14569 222 aa10.9□□□□□ -0.67
POLR2J3-201ENST00000379340 GABRDO14764 452 aa10.9□□□□□ -0.67
POLR2J3-201ENST00000379340 GPR182O15218 404 aa10.9□□□□□ -0.67
POLR2J3-201ENST00000379340 CHADO15335 359 aa10.9□□□□□ -0.67
POLR2J3-201ENST00000379340 SPAG6O75602 509 aa10.9□□□□□ -0.67
POLR2J3-201ENST00000379340 PDGFRBP09619 1106 aa10.9□□□□□ -0.67
POLR2J3-201ENST00000379340 LMO2P25791 158 aa10.9□□□□□ -0.67
POLR2J3-201ENST00000379340 ATP5OP48047 213 aa10.9□□□□□ -0.67
POLR2J3-201ENST00000379340 LHX1P48742 406 aa10.9□□□□□ -0.67
POLR2J3-201ENST00000379340 NR2C2P49116 596 aa10.9□□□□□ -0.67
POLR2J3-201ENST00000379340 HDAC4P56524 1084 aa10.9□□□□□ -0.67
POLR2J3-201ENST00000379340 BCAR1P56945 870 aa10.9□□□□□ -0.67
POLR2J3-201ENST00000379340 RNASELQ05823 741 aaKnown RBP10.9□□□□□ -0.67
POLR2J3-201ENST00000379340 MMRN1Q13201 1228 aa10.9□□□□□ -0.67
POLR2J3-201ENST00000379340 KLHL38Q2WGJ6 581 aa10.9□□□□□ -0.67
POLR2J3-201ENST00000379340 NBPF20Q3BBV1 942 aa10.9□□□□□ -0.67
POLR2J3-201ENST00000379340 GKAP1Q5VSY0 366 aaPredicted RBP10.9□□□□□ -0.67
POLR2J3-201ENST00000379340 ARHGEF18Q6ZSZ5 1173 aa10.9□□□□□ -0.67
POLR2J3-201ENST00000379340 CPLX4Q7Z7G2 160 aa10.9□□□□□ -0.67
POLR2J3-201ENST00000379340 SERINC5Q86VE9 423 aa10.9□□□□□ -0.67
POLR2J3-201ENST00000379340 ZBED8Q8IZ13 594 aa10.9□□□□□ -0.67
POLR2J3-201ENST00000379340 CACNA2D3Q8IZS8 1091 aa10.9□□□□□ -0.67
POLR2J3-201ENST00000379340 PLD5Q8N7P1 536 aa10.9□□□□□ -0.67
POLR2J3-201ENST00000379340 ARRDC4Q8NCT1 418 aa10.9□□□□□ -0.67
POLR2J3-201ENST00000379340 TRPV1Q8NER1 839 aa10.9□□□□□ -0.67
POLR2J3-201ENST00000379340 MDM1Q8TC05 714 aa10.9□□□□□ -0.67
POLR2J3-201ENST00000379340 PPP1R13LQ8WUF5 828 aa10.9□□□□□ -0.67
POLR2J3-201ENST00000379340 SENP6Q9GZR1 1112 aaPredicted RBP10.9□□□□□ -0.67
POLR2J3-201ENST00000379340 TSPYL2Q9H2G4 693 aaPredicted RBP10.9□□□□□ -0.67
POLR2J3-201ENST00000379340 RABEP2Q9H5N1 569 aa10.9□□□□□ -0.67
POLR2J3-201ENST00000379340 C11orf49Q9H6J7 331 aa10.9□□□□□ -0.67
POLR2J3-201ENST00000379340 VPS37BQ9H9H4 285 aa10.9□□□□□ -0.67
POLR2J3-201ENST00000379340 FAM105AQ9NUU6 356 aa10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms