RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 TYROBPO43914 113 aa11.31□□□□□ -0.6
USP6NL-202ENST00000379237 CLASP2O75122 1294 aaKnown RBP11.31□□□□□ -0.6
USP6NL-202ENST00000379237 MED24O75448 989 aa11.31□□□□□ -0.6
USP6NL-202ENST00000379237 LYPLA1O75608 230 aaPredicted RBP11.31□□□□□ -0.6
USP6NL-202ENST00000379237 TMEM191BP0C7N4 346 aa11.31□□□□□ -0.6
USP6NL-202ENST00000379237 ZNF23P17027 643 aa11.31□□□□□ -0.6
USP6NL-202ENST00000379237 ELK3P41970 407 aa11.31□□□□□ -0.6
USP6NL-202ENST00000379237 SERPINB10P48595 397 aa11.31□□□□□ -0.6
USP6NL-202ENST00000379237 JAM2P57087 298 aa11.31□□□□□ -0.6
USP6NL-202ENST00000379237 PPP2R2DQ66LE6 453 aa11.31□□□□□ -0.6
USP6NL-202ENST00000379237 CIAPIN1Q6FI81 312 aa11.31□□□□□ -0.6
USP6NL-202ENST00000379237 LAYNQ6UX15 382 aa11.31□□□□□ -0.6
USP6NL-202ENST00000379237 CYP2R1Q6VVX0 501 aa11.31□□□□□ -0.6
USP6NL-202ENST00000379237 C11orf74Q86VG3 221 aa11.31□□□□□ -0.6
USP6NL-202ENST00000379237 ZDHHC14Q8IZN3 488 aa11.31□□□□□ -0.6
USP6NL-202ENST00000379237 C12orf50Q8NA57 414 aaPredicted RBP11.31□□□□□ -0.6
USP6NL-202ENST00000379237 KAT5Q92993 513 aa11.31□□□□□ -0.6
USP6NL-202ENST00000379237 OSBPL11Q9BXB4 747 aa11.31□□□□□ -0.6
USP6NL-202ENST00000379237 ZDHHC7Q9NXF8 308 aa11.31□□□□□ -0.6
USP6NL-202ENST00000379237 EBF1Q9UH73 591 aa11.31□□□□□ -0.6
USP6NL-202ENST00000379237 PCDHB4Q9Y5E5 795 aa11.31□□□□□ -0.6
USP6NL-202ENST00000379237 NID2Q14112 1375 aa11.31□□□□□ -0.6
USP6NL-202ENST00000379237 GABBR2O75899 941 aa11.3□□□□□ -0.6
USP6NL-202ENST00000379237 COX4I1P13073 169 aa11.3□□□□□ -0.6
USP6NL-202ENST00000379237 SLC1A6P48664 564 aa11.3□□□□□ -0.6
USP6NL-202ENST00000379237 SLC18A1P54219 525 aa11.3□□□□□ -0.6
USP6NL-202ENST00000379237 GK3PQ14409 553 aa11.3□□□□□ -0.6
USP6NL-202ENST00000379237 PRKD1Q15139 912 aaPredicted RBP11.3□□□□□ -0.6
USP6NL-202ENST00000379237 ECM1Q16610 540 aa11.3□□□□□ -0.6
USP6NL-202ENST00000379237 GEN1Q17RS7 908 aa11.3□□□□□ -0.6
USP6NL-202ENST00000379237 SLC10A5Q5PT55 438 aa11.3□□□□□ -0.6
USP6NL-202ENST00000379237 ACAD10Q6JQN1 1059 aa11.3□□□□□ -0.6
USP6NL-202ENST00000379237 NOP9Q86U38 636 aaKnown RBP11.3□□□□□ -0.6
USP6NL-202ENST00000379237 RCOR2Q8IZ40 523 aa11.3□□□□□ -0.6
USP6NL-202ENST00000379237 CNDP1Q96KN2 507 aa11.3□□□□□ -0.6
USP6NL-202ENST00000379237 C8orf37Q96NL8 207 aa11.3□□□□□ -0.6
USP6NL-202ENST00000379237 RNPEPQ9H4A4 650 aa11.3□□□□□ -0.6
USP6NL-202ENST00000379237 KCNQ5Q9NR82 932 aa11.3□□□□□ -0.6
USP6NL-202ENST00000379237 AXIN2Q9Y2T1 843 aa11.3□□□□□ -0.6
USP6NL-202ENST00000379237 ARHGAP23Q9P227 1491 aa11.3□□□□□ -0.6
USP6NL-202ENST00000379237 MYPNQ86TC9 1320 aa11.3□□□□□ -0.6
USP6NL-202ENST00000379237 TTKP33981 857 aa11.3□□□□□ -0.6
USP6NL-202ENST00000379237 PTK2BQ14289 1009 aa11.3□□□□□ -0.6
USP6NL-202ENST00000379237 ATG14Q6ZNE5 492 aa11.3□□□□□ -0.6
USP6NL-202ENST00000379237 AKAP14Q86UN6 197 aa11.3□□□□□ -0.6
USP6NL-202ENST00000379237 ARHGEF19Q8IW93 802 aa11.3□□□□□ -0.6
USP6NL-202ENST00000379237 BANPQ8N9N5 519 aa11.3□□□□□ -0.6
USP6NL-202ENST00000379237 ACSS3Q9H6R3 686 aa11.3□□□□□ -0.6
USP6NL-202ENST00000379237 RPAP3Q9H6T3 665 aaPredicted RBP11.3□□□□□ -0.6
USP6NL-202ENST00000379237 STK24Q9Y6E0 443 aa11.3□□□□□ -0.6
USP6NL-202ENST00000379237 A0A088AWK7 358 aa11.3□□□□□ -0.6
USP6NL-202ENST00000379237 STAM2O75886 525 aa11.3□□□□□ -0.6
USP6NL-202ENST00000379237 SORBS2O94875 1100 aaKnown RBP11.3□□□□□ -0.6
USP6NL-202ENST00000379237 MAP3K7CLP57077 242 aa11.3□□□□□ -0.6
USP6NL-202ENST00000379237 RPL26P61254 145 aaKnown RBP11.3□□□□□ -0.6
USP6NL-202ENST00000379237 GSTO1P78417 241 aa11.3□□□□□ -0.6
USP6NL-202ENST00000379237 ALCAMQ13740 583 aa11.3□□□□□ -0.6
USP6NL-202ENST00000379237 ADGRE1Q14246 886 aa11.3□□□□□ -0.6
USP6NL-202ENST00000379237 TGFBIQ15582 683 aa11.3□□□□□ -0.6
USP6NL-202ENST00000379237 RAVER1Q8IY67 606 aaKnown RBP11.3□□□□□ -0.6
USP6NL-202ENST00000379237 BIRC8Q96P09 236 aa11.3□□□□□ -0.6
USP6NL-202ENST00000379237 OLFM1Q99784 485 aa11.3□□□□□ -0.6
USP6NL-202ENST00000379237 CIB1Q99828 191 aa11.3□□□□□ -0.6
USP6NL-202ENST00000379237 GNPTGQ9UJJ9 305 aa11.3□□□□□ -0.6
USP6NL-202ENST00000379237 SLC8A2Q9UPR5 921 aa11.3□□□□□ -0.6
USP6NL-202ENST00000379237 KBTBD13C9JR72 458 aa11.3□□□□□ -0.6
USP6NL-202ENST00000379237 CLOCKO15516 846 aa11.3□□□□□ -0.6
USP6NL-202ENST00000379237 PHGDHO43175 533 aaKnown RBP11.3□□□□□ -0.6
USP6NL-202ENST00000379237 TRIM16O95361 564 aa11.3□□□□□ -0.6
USP6NL-202ENST00000379237 APOA1P02647 267 aa11.3□□□□□ -0.6
USP6NL-202ENST00000379237 PABPC1P11940 636 aaKnown RBP11.3□□□□□ -0.6
USP6NL-202ENST00000379237 CYP11B1P15538 503 aa11.3□□□□□ -0.6
USP6NL-202ENST00000379237 POLR2EP19388 210 aaKnown RBP11.3□□□□□ -0.6
USP6NL-202ENST00000379237 LTKP29376 864 aa11.3□□□□□ -0.6
USP6NL-202ENST00000379237 TYK2P29597 1187 aa11.3□□□□□ -0.6
USP6NL-202ENST00000379237 PSMC6P62333 389 aa11.3□□□□□ -0.6
USP6NL-202ENST00000379237 CCNIQ14094 377 aa11.3□□□□□ -0.6
USP6NL-202ENST00000379237 C16orf46Q6P387 395 aa11.3□□□□□ -0.6
USP6NL-202ENST00000379237 KCTD6Q8NC69 237 aa11.3□□□□□ -0.6
USP6NL-202ENST00000379237 ISOC1Q96CN7 298 aa11.3□□□□□ -0.6
USP6NL-202ENST00000379237 CEPT1Q9Y6K0 416 aa11.3□□□□□ -0.6
USP6NL-202ENST00000379237 BUD23O43709 281 aaKnown RBP11.29□□□□□ -0.6
USP6NL-202ENST00000379237 PRDX5P30044 214 aa11.29□□□□□ -0.6
USP6NL-202ENST00000379237 SOX11P35716 441 aa11.29□□□□□ -0.6
USP6NL-202ENST00000379237 EVX2Q03828 476 aa11.29□□□□□ -0.6
USP6NL-202ENST00000379237 ABCB5Q2M3G0 1257 aa11.29□□□□□ -0.6
USP6NL-202ENST00000379237 DEPDC1Q5TB30 811 aa11.29□□□□□ -0.6
USP6NL-202ENST00000379237 FAM71DQ8N9W8 422 aa11.29□□□□□ -0.6
USP6NL-202ENST00000379237 FNIP1Q8TF40 1166 aa11.29□□□□□ -0.6
USP6NL-202ENST00000379237 HTRA1Q92743 480 aa11.29□□□□□ -0.6
USP6NL-202ENST00000379237 ELMO3Q96BJ8 720 aa11.29□□□□□ -0.6
USP6NL-202ENST00000379237 ATXN7L3BQ96GX2 97 aa11.29□□□□□ -0.6
USP6NL-202ENST00000379237 DEPDC7Q96QD5 511 aa11.29□□□□□ -0.6
USP6NL-202ENST00000379237 HERC2P3Q9BVR0 1158 aa11.29□□□□□ -0.6
USP6NL-202ENST00000379237 IKZF4Q9H2S9 585 aa11.29□□□□□ -0.6
USP6NL-202ENST00000379237 RAD21L1Q9H4I0 556 aa11.29□□□□□ -0.6
USP6NL-202ENST00000379237 ZNF696Q9H7X3 374 aa11.29□□□□□ -0.6
USP6NL-202ENST00000379237 MRPL40Q9NQ50 206 aaKnown RBP11.29□□□□□ -0.6
USP6NL-202ENST00000379237 MYH4Q9Y623 1939 aa11.29□□□□□ -0.6
USP6NL-202ENST00000379237 PCP4L1A6NKN8 68 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms