RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 HSPH1Q92598 858 aa17.26■□□□□ 0.35
PCDHA1-201ENST00000378133 HOXC10Q9NYD6 342 aa17.26■□□□□ 0.35
PCDHA1-201ENST00000378133 ZNF112Q9UJU3 913 aa17.26■□□□□ 0.35
PCDHA1-201ENST00000378133 AFG3L2Q9Y4W6 797 aa17.26■□□□□ 0.35
PCDHA1-201ENST00000378133 C19orf81C9J6K1 198 aa17.26■□□□□ 0.35
PCDHA1-201ENST00000378133 PRKCBP05771 671 aa17.26■□□□□ 0.35
PCDHA1-201ENST00000378133 DHRS4L1P0CG22 281 aa17.26■□□□□ 0.35
PCDHA1-201ENST00000378133 TCF7P36402 384 aaPredicted RBP17.26■□□□□ 0.35
PCDHA1-201ENST00000378133 EFNA5P52803 228 aa17.26■□□□□ 0.35
PCDHA1-201ENST00000378133 MDH1BQ5I0G3 518 aa17.26■□□□□ 0.35
PCDHA1-201ENST00000378133 MYLK4Q86YV6 388 aaPredicted RBP17.26■□□□□ 0.35
PCDHA1-201ENST00000378133 PDIK1LQ8N165 341 aa17.26■□□□□ 0.35
PCDHA1-201ENST00000378133 PPP2R3CQ969Q6 453 aa17.26■□□□□ 0.35
PCDHA1-201ENST00000378133 SPON1Q9HCB6 807 aa17.26■□□□□ 0.35
PCDHA1-201ENST00000378133 ZNF232Q9UNY5 417 aa17.26■□□□□ 0.35
PCDHA1-201ENST00000378133 CHMP2BQ9UQN3 213 aa17.26■□□□□ 0.35
PCDHA1-201ENST00000378133 LTBP3Q9NS15 1303 aa17.25■□□□□ 0.35
PCDHA1-201ENST00000378133 ETV4P43268 484 aa17.25■□□□□ 0.35
PCDHA1-201ENST00000378133 GMPSP49915 693 aaPredicted RBP17.25■□□□□ 0.35
PCDHA1-201ENST00000378133 EIF3EP60228 445 aaKnown RBP17.25■□□□□ 0.35
PCDHA1-201ENST00000378133 ACTR3P61158 418 aa17.25■□□□□ 0.35
PCDHA1-201ENST00000378133 KDSRQ06136 332 aa17.25■□□□□ 0.35
PCDHA1-201ENST00000378133 LAMTOR4Q0VGL1 99 aa17.25■□□□□ 0.35
PCDHA1-201ENST00000378133 FAM91A1Q658Y4 838 aa17.25■□□□□ 0.35
PCDHA1-201ENST00000378133 NCAPG2Q86XI2 1143 aa17.25■□□□□ 0.35
PCDHA1-201ENST00000378133 TREML1Q86YW5 311 aa17.25■□□□□ 0.35
PCDHA1-201ENST00000378133 IGDCC3Q8IVU1 814 aa17.25■□□□□ 0.35
PCDHA1-201ENST00000378133 DNERQ8NFT8 737 aa17.25■□□□□ 0.35
PCDHA1-201ENST00000378133 CALN1Q9BXU9 219 aa17.25■□□□□ 0.35
PCDHA1-201ENST00000378133 IL1RAPL1Q9NZN1 696 aa17.25■□□□□ 0.35
PCDHA1-201ENST00000378133 GJA3Q9Y6H8 435 aa17.25■□□□□ 0.35
PCDHA1-201ENST00000378133 E7ESA3 106 aa17.25■□□□□ 0.35
PCDHA1-201ENST00000378133 TM7SF2O76062 418 aa17.25■□□□□ 0.35
PCDHA1-201ENST00000378133 RBP3P10745 1247 aa17.25■□□□□ 0.35
PCDHA1-201ENST00000378133 CDC16Q13042 620 aa17.25■□□□□ 0.35
PCDHA1-201ENST00000378133 C1orf146Q5VVC0 180 aa17.25■□□□□ 0.35
PCDHA1-201ENST00000378133 ULK2Q8IYT8 1036 aa17.25■□□□□ 0.35
PCDHA1-201ENST00000378133 ST13P4Q8IZP2 240 aaPredicted RBP17.25■□□□□ 0.35
PCDHA1-201ENST00000378133 OCEL1Q9H607 264 aa17.25■□□□□ 0.35
PCDHA1-201ENST00000378133 PPARGC1AQ9UBK2 798 aaKnown RBP17.25■□□□□ 0.35
PCDHA1-201ENST00000378133 COMMD3-BMI1R4GMX3 469 aa17.25■□□□□ 0.35
PCDHA1-201ENST00000378133 LCTP09848 1927 aa17.24■□□□□ 0.35
PCDHA1-201ENST00000378133 CAPN14A8MX76 684 aa17.24■□□□□ 0.35
PCDHA1-201ENST00000378133 RNASEH1O60930 286 aaKnown RBP17.24■□□□□ 0.35
PCDHA1-201ENST00000378133 USP1O94782 785 aa17.24■□□□□ 0.35
PCDHA1-201ENST00000378133 ERBB2P04626 1255 aa17.24■□□□□ 0.35
PCDHA1-201ENST00000378133 ETS2P15036 469 aa17.24■□□□□ 0.35
PCDHA1-201ENST00000378133 MIPP30301 263 aa17.24■□□□□ 0.35
PCDHA1-201ENST00000378133 DPYSL3Q14195 570 aa17.24■□□□□ 0.35
PCDHA1-201ENST00000378133 MARK2Q7KZI7 788 aaKnown RBP17.24■□□□□ 0.35
PCDHA1-201ENST00000378133 SDCCAG8Q86SQ7 713 aaPredicted RBP17.24■□□□□ 0.35
PCDHA1-201ENST00000378133 SERAC1Q96JX3 654 aa17.24■□□□□ 0.35
PCDHA1-201ENST00000378133 DNAJB4Q9UDY4 337 aa17.24■□□□□ 0.35
PCDHA1-201ENST00000378133 SLC7A8Q9UHI5 535 aa17.24■□□□□ 0.35
PCDHA1-201ENST00000378133 IKBKGQ9Y6K9 419 aa17.24■□□□□ 0.35
PCDHA1-201ENST00000378133 DOCK1Q14185 1865 aa17.24■□□□□ 0.35
PCDHA1-201ENST00000378133 KAT6AQ92794 2004 aa17.24■□□□□ 0.35
PCDHA1-201ENST00000378133 IQANK1A0A1B0GTG1 560 aa17.24■□□□□ 0.35
PCDHA1-201ENST00000378133 E5RJQ4 531 aa17.24■□□□□ 0.35
PCDHA1-201ENST00000378133 TAZQ16635 292 aa17.24■□□□□ 0.35
PCDHA1-201ENST00000378133 NPNTQ6UXI9 565 aa17.24■□□□□ 0.35
PCDHA1-201ENST00000378133 XYLT1Q86Y38 959 aa17.24■□□□□ 0.35
PCDHA1-201ENST00000378133 SPATA18Q8TC71 538 aa17.24■□□□□ 0.35
PCDHA1-201ENST00000378133 APOPT1Q96IL0 206 aa17.24■□□□□ 0.35
PCDHA1-201ENST00000378133 OLFM3Q96PB7 478 aa17.24■□□□□ 0.35
PCDHA1-201ENST00000378133 LHX5Q9H2C1 402 aa17.24■□□□□ 0.35
PCDHA1-201ENST00000378133 EBF3Q9H4W6 596 aa17.24■□□□□ 0.35
PCDHA1-201ENST00000378133 PPM1HQ9ULR3 514 aa17.24■□□□□ 0.35
PCDHA1-201ENST00000378133 SPECC1L-ADORA2AF8WAN1 911 aa17.23■□□□□ 0.35
PCDHA1-201ENST00000378133 TNNC2P02585 160 aa17.23■□□□□ 0.35
PCDHA1-201ENST00000378133 GJB1P08034 283 aa17.23■□□□□ 0.35
PCDHA1-201ENST00000378133 ELK3P41970 407 aa17.23■□□□□ 0.35
PCDHA1-201ENST00000378133 MMRN1Q13201 1228 aa17.23■□□□□ 0.35
PCDHA1-201ENST00000378133 PTK7Q13308 1070 aa17.23■□□□□ 0.35
PCDHA1-201ENST00000378133 SURF1Q15526 300 aa17.23■□□□□ 0.35
PCDHA1-201ENST00000378133 LY6KQ17RY6 165 aa17.23■□□□□ 0.35
PCDHA1-201ENST00000378133 IER5Q5VY09 327 aa17.23■□□□□ 0.35
PCDHA1-201ENST00000378133 FAM160B1Q5W0V3 765 aa17.23■□□□□ 0.35
PCDHA1-201ENST00000378133 TRIM50Q86XT4 487 aa17.23■□□□□ 0.35
PCDHA1-201ENST00000378133 TMEM192Q8IY95 271 aa17.23■□□□□ 0.35
PCDHA1-201ENST00000378133 FNIP1Q8TF40 1166 aa17.23■□□□□ 0.35
PCDHA1-201ENST00000378133 ANKRD36BP1Q96IX9 119 aa17.23■□□□□ 0.35
PCDHA1-201ENST00000378133 HAPLN3Q96S86 360 aa17.23■□□□□ 0.35
PCDHA1-201ENST00000378133 FRMD8P1Q9BZ68 369 aaPredicted RBP17.23■□□□□ 0.35
PCDHA1-201ENST00000378133 KCNK4Q9NYG8 393 aa17.23■□□□□ 0.35
PCDHA1-201ENST00000378133 PLA2G4CQ9UP65 541 aa17.23■□□□□ 0.35
PCDHA1-201ENST00000378133 PCDHGA4Q9Y5G9 962 aa17.23■□□□□ 0.35
PCDHA1-201ENST00000378133 APOC4-APOC2K7ER74 178 aa17.23■□□□□ 0.35
PCDHA1-201ENST00000378133 OPHN1O60890 802 aa17.23■□□□□ 0.35
PCDHA1-201ENST00000378133 APOC2P02655 101 aa17.23■□□□□ 0.35
PCDHA1-201ENST00000378133 LSAMPQ13449 338 aa17.23■□□□□ 0.35
PCDHA1-201ENST00000378133 PRKG1Q13976 671 aa17.23■□□□□ 0.35
PCDHA1-201ENST00000378133 ZBTB8OSQ8IWT0 167 aa17.23■□□□□ 0.35
PCDHA1-201ENST00000378133 SLC25A41Q8N5S1 370 aa17.23■□□□□ 0.35
PCDHA1-201ENST00000378133 CMASQ8NFW8 434 aaPredicted RBP17.23■□□□□ 0.35
PCDHA1-201ENST00000378133 SEPT1Q8WYJ6 367 aa17.23■□□□□ 0.35
PCDHA1-201ENST00000378133 MTBPQ96DY7 904 aa17.23■□□□□ 0.35
PCDHA1-201ENST00000378133 TAGLN3Q9UI15 199 aa17.23■□□□□ 0.35
PCDHA1-201ENST00000378133 USP18Q9UMW8 372 aa17.23■□□□□ 0.35
PCDHA1-201ENST00000378133 PDLIM1O00151 329 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms