RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 SLC26A11Q86WA9 606 aa11.37□□□□□ -0.59
BEST1-201ENST00000378043 SCUBE3Q8IX30 993 aa11.37□□□□□ -0.59
BEST1-201ENST00000378043 GPC2Q8N158 579 aa11.37□□□□□ -0.59
BEST1-201ENST00000378043 PPM1NQ8N819 430 aa11.37□□□□□ -0.59
BEST1-201ENST00000378043 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.37□□□□□ -0.59
BEST1-201ENST00000378043 SKA1Q96BD8 255 aa11.37□□□□□ -0.59
BEST1-201ENST00000378043 PTCD3Q96EY7 689 aaKnown RBP11.37□□□□□ -0.59
BEST1-201ENST00000378043 MMP19Q99542 508 aa11.37□□□□□ -0.59
BEST1-201ENST00000378043 SNRNP25Q9BV90 132 aaKnown RBP11.37□□□□□ -0.59
BEST1-201ENST00000378043 NT5C1AQ9BXI3 368 aa11.37□□□□□ -0.59
BEST1-201ENST00000378043 MAGEB5Q9BZ81 275 aa11.37□□□□□ -0.59
BEST1-201ENST00000378043 UGT1A7Q9HAW7 530 aa11.37□□□□□ -0.59
BEST1-201ENST00000378043 UGT1A10Q9HAW8 530 aa11.37□□□□□ -0.59
BEST1-201ENST00000378043 UGT1A8Q9HAW9 530 aa11.37□□□□□ -0.59
BEST1-201ENST00000378043 IKBKGQ9Y6K9 419 aa11.37□□□□□ -0.59
BEST1-201ENST00000378043 CEP350Q5VT06 3117 aa11.36□□□□□ -0.59
BEST1-201ENST00000378043 DPYSL4O14531 572 aa11.36□□□□□ -0.59
BEST1-201ENST00000378043 TGDSO95455 350 aa11.36□□□□□ -0.59
BEST1-201ENST00000378043 APRTP07741 180 aa11.36□□□□□ -0.59
BEST1-201ENST00000378043 MAGEA6P43360 314 aa11.36□□□□□ -0.59
BEST1-201ENST00000378043 HDAC4P56524 1084 aa11.36□□□□□ -0.59
BEST1-201ENST00000378043 BCAR1P56945 870 aa11.36□□□□□ -0.59
BEST1-201ENST00000378043 MRPS5P82675 430 aaKnown RBP11.36□□□□□ -0.59
BEST1-201ENST00000378043 KRT81Q14533 505 aa11.36□□□□□ -0.59
BEST1-201ENST00000378043 KCTD2Q14681 263 aa11.36□□□□□ -0.59
BEST1-201ENST00000378043 PDK2Q15119 407 aa11.36□□□□□ -0.59
BEST1-201ENST00000378043 GOLGA7BQ2TAP0 167 aa11.36□□□□□ -0.59
BEST1-201ENST00000378043 BOLA3Q53S33 107 aa11.36□□□□□ -0.59
BEST1-201ENST00000378043 MOB2Q70IA6 237 aa11.36□□□□□ -0.59
BEST1-201ENST00000378043 ZNF534Q76KX8 674 aa11.36□□□□□ -0.59
BEST1-201ENST00000378043 TTC8Q8TAM2 541 aa11.36□□□□□ -0.59
BEST1-201ENST00000378043 CCDC110Q8TBZ0 833 aa11.36□□□□□ -0.59
BEST1-201ENST00000378043 STK32AQ8WU08 396 aa11.36□□□□□ -0.59
BEST1-201ENST00000378043 FAM172AQ8WUF8 416 aa11.36□□□□□ -0.59
BEST1-201ENST00000378043 MIEF2Q96C03 454 aa11.36□□□□□ -0.59
BEST1-201ENST00000378043 SRPK1Q96SB4 655 aaKnown RBP11.36□□□□□ -0.59
BEST1-201ENST00000378043 MPHOSPH6Q99547 160 aaKnown RBP11.36□□□□□ -0.59
BEST1-201ENST00000378043 TMEM120AQ9BXJ8 343 aa11.36□□□□□ -0.59
BEST1-201ENST00000378043 CADM1Q9BY67 442 aaKnown RBP11.36□□□□□ -0.59
BEST1-201ENST00000378043 B3GNT5Q9BYG0 378 aa11.36□□□□□ -0.59
BEST1-201ENST00000378043 ETNK2Q9NVF9 386 aa11.36□□□□□ -0.59
BEST1-201ENST00000378043 ITGA11Q9UKX5 1188 aa11.36□□□□□ -0.59
BEST1-201ENST00000378043 C2CD2Q9Y426 696 aa11.36□□□□□ -0.59
BEST1-201ENST00000378043 BCLAF3A2AJT9 711 aaKnown RBP11.36□□□□□ -0.59
BEST1-201ENST00000378043 HMX2A2RU54 273 aa11.36□□□□□ -0.59
BEST1-201ENST00000378043 CFAP69A5D8W1 941 aa11.36□□□□□ -0.59
BEST1-201ENST00000378043 SLC15A5A6NIM6 579 aa11.36□□□□□ -0.59
BEST1-201ENST00000378043 APOL1O14791 398 aa11.36□□□□□ -0.59
BEST1-201ENST00000378043 PAPSS1O43252 624 aaPredicted RBP11.36□□□□□ -0.59
BEST1-201ENST00000378043 STAU1O95793 577 aaKnown RBP11.36□□□□□ -0.59
BEST1-201ENST00000378043 LGALS2P05162 132 aa11.36□□□□□ -0.59
BEST1-201ENST00000378043 TGM2P21980 687 aa11.36□□□□□ -0.59
BEST1-201ENST00000378043 PRKCHP24723 683 aa11.36□□□□□ -0.59
BEST1-201ENST00000378043 SLC8A3P57103 927 aa11.36□□□□□ -0.59
BEST1-201ENST00000378043 RBP5P82980 135 aa11.36□□□□□ -0.59
BEST1-201ENST00000378043 SLC10A2Q12908 348 aaPredicted RBP11.36□□□□□ -0.59
BEST1-201ENST00000378043 HSF5Q4G112 596 aaPredicted RBP11.36□□□□□ -0.59
BEST1-201ENST00000378043 WDR78Q5VTH9 848 aa11.36□□□□□ -0.59
BEST1-201ENST00000378043 RFWD3Q6PCD5 774 aa11.36□□□□□ -0.59
BEST1-201ENST00000378043 TTC7BQ86TV6 843 aa11.36□□□□□ -0.59
BEST1-201ENST00000378043 MAP7D3Q8IWC1 876 aa11.36□□□□□ -0.59
BEST1-201ENST00000378043 CTAGE3PQ8IX95 158 aa11.36□□□□□ -0.59
BEST1-201ENST00000378043 MRPL45Q9BRJ2 306 aaKnown RBP11.36□□□□□ -0.59
BEST1-201ENST00000378043 MECRQ9BV79 373 aa11.36□□□□□ -0.59
BEST1-201ENST00000378043 SLC4A5Q9BY07 1137 aa11.36□□□□□ -0.59
BEST1-201ENST00000378043 ZC3H7BQ9UGR2 993 aaKnown RBP11.36□□□□□ -0.59
BEST1-201ENST00000378043 KIAA1257Q9ULG3 409 aa11.36□□□□□ -0.59
BEST1-201ENST00000378043 AKT3Q9Y243 479 aa11.36□□□□□ -0.59
BEST1-201ENST00000378043 ZNF638Q14966 1978 aaKnown RBP11.35□□□□□ -0.59
BEST1-201ENST00000378043 PPEF2O14830 753 aa11.35□□□□□ -0.59
BEST1-201ENST00000378043 TSPAN1O60635 241 aa11.35□□□□□ -0.59
BEST1-201ENST00000378043 DNAJC6O75061 913 aa11.35□□□□□ -0.59
BEST1-201ENST00000378043 RFPL1O75677 317 aa11.35□□□□□ -0.59
BEST1-201ENST00000378043 METTL18O95568 372 aa11.35□□□□□ -0.59
BEST1-201ENST00000378043 IL1BP01584 269 aa11.35□□□□□ -0.59
BEST1-201ENST00000378043 CDC25CP30307 473 aa11.35□□□□□ -0.59
BEST1-201ENST00000378043 MAGEA3P43357 314 aa11.35□□□□□ -0.59
BEST1-201ENST00000378043 ARFIP2P53365 341 aa11.35□□□□□ -0.59
BEST1-201ENST00000378043 TTLL4Q14679 1199 aa11.35□□□□□ -0.59
BEST1-201ENST00000378043 ZNF484Q5JVG2 852 aa11.35□□□□□ -0.59
BEST1-201ENST00000378043 TTC39BQ5VTQ0 682 aaPredicted RBP11.35□□□□□ -0.59
BEST1-201ENST00000378043 BZW1Q7L1Q6 419 aaKnown RBP11.35□□□□□ -0.59
BEST1-201ENST00000378043 TMEM110Q86TL2 294 aa11.35□□□□□ -0.59
BEST1-201ENST00000378043 ACOT1Q86TX2 421 aa11.35□□□□□ -0.59
BEST1-201ENST00000378043 ENDOVQ8N8Q3 282 aaKnown RBP11.35□□□□□ -0.59
BEST1-201ENST00000378043 SLC35F5Q8WV83 523 aa11.35□□□□□ -0.59
BEST1-201ENST00000378043 TEKT4Q8WW24 435 aa11.35□□□□□ -0.59
BEST1-201ENST00000378043 USP6NLQ92738 828 aa11.35□□□□□ -0.59
BEST1-201ENST00000378043 NUDCD1Q96RS6 583 aa11.35□□□□□ -0.59
BEST1-201ENST00000378043 LPIN3Q9BQK8 851 aa11.35□□□□□ -0.59
BEST1-201ENST00000378043 FAM49BQ9NUQ9 324 aa11.35□□□□□ -0.59
BEST1-201ENST00000378043 ZNF180Q9UJW8 692 aa11.35□□□□□ -0.59
BEST1-201ENST00000378043 DICER1Q9UPY3 1922 aaKnown RBP11.35□□□□□ -0.59
BEST1-201ENST00000378043 ECM2O94769 699 aaPredicted RBP11.35□□□□□ -0.59
BEST1-201ENST00000378043 ZBED1O96006 694 aa11.35□□□□□ -0.59
BEST1-201ENST00000378043 ATXN1P54253 815 aaKnown RBP11.35□□□□□ -0.59
BEST1-201ENST00000378043 CDK16Q00536 496 aa11.35□□□□□ -0.59
BEST1-201ENST00000378043 SLC6A3Q01959 620 aa11.35□□□□□ -0.59
BEST1-201ENST00000378043 GBE1Q04446 702 aa11.35□□□□□ -0.59
BEST1-201ENST00000378043 CRYMQ14894 314 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms