RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 AGPAT1Q99943 283 aa13.89□□□□□ -0.19
CKAP2-202ENST00000378034 TRIM5Q9C035 493 aa13.89□□□□□ -0.19
CKAP2-202ENST00000378034 TRPV5Q9NQA5 729 aa13.89□□□□□ -0.19
CKAP2-202ENST00000378034 DNMT3LQ9UJW3 386 aa13.89□□□□□ -0.19
CKAP2-202ENST00000378034 CCL26Q9Y258 94 aa13.89□□□□□ -0.19
CKAP2-202ENST00000378034 CPQQ9Y646 472 aa13.89□□□□□ -0.19
CKAP2-202ENST00000378034 TTC28Q96AY4 2481 aa13.88□□□□□ -0.19
CKAP2-202ENST00000378034 ZNF263O14978 683 aa13.88□□□□□ -0.19
CKAP2-202ENST00000378034 LTFP02788 710 aa13.88□□□□□ -0.19
CKAP2-202ENST00000378034 GLI1P08151 1106 aa13.88□□□□□ -0.19
CKAP2-202ENST00000378034 GABRB2P47870 512 aa13.88□□□□□ -0.19
CKAP2-202ENST00000378034 NOMO3P69849 1222 aa13.88□□□□□ -0.19
CKAP2-202ENST00000378034 GOLGA8FQ08AF8 430 aa13.88□□□□□ -0.19
CKAP2-202ENST00000378034 GOLGA8DPQ0D2H9 430 aa13.88□□□□□ -0.19
CKAP2-202ENST00000378034 ZNF77Q15935 545 aa13.88□□□□□ -0.19
CKAP2-202ENST00000378034 C10orf120Q5SQS8 335 aa13.88□□□□□ -0.19
CKAP2-202ENST00000378034 PPP1R2P3Q6NXS1 205 aa13.88□□□□□ -0.19
CKAP2-202ENST00000378034 ERICH1Q86X53 443 aa13.88□□□□□ -0.19
CKAP2-202ENST00000378034 ST13P5Q8NFI4 369 aaPredicted RBP13.88□□□□□ -0.19
CKAP2-202ENST00000378034 SH3RF2Q8TEC5 729 aa13.88□□□□□ -0.19
CKAP2-202ENST00000378034 DNASE1L2Q92874 299 aa13.88□□□□□ -0.19
CKAP2-202ENST00000378034 SYNCQ9H7C4 482 aa13.88□□□□□ -0.19
CKAP2-202ENST00000378034 ASNSD1Q9NWL6 643 aa13.88□□□□□ -0.19
CKAP2-202ENST00000378034 BZW2Q9Y6E2 419 aaKnown RBP13.88□□□□□ -0.19
CKAP2-202ENST00000378034 KIF26AQ9ULI4 1882 aaPredicted RBP13.88□□□□□ -0.19
CKAP2-202ENST00000378034 LEFTY2O00292 366 aa13.87□□□□□ -0.19
CKAP2-202ENST00000378034 PIK3R2O00459 728 aa13.87□□□□□ -0.19
CKAP2-202ENST00000378034 PAPSS1O43252 624 aaPredicted RBP13.87□□□□□ -0.19
CKAP2-202ENST00000378034 GYPCP04921 128 aa13.87□□□□□ -0.19
CKAP2-202ENST00000378034 TPM1P09493 284 aa13.87□□□□□ -0.19
CKAP2-202ENST00000378034 GDI1P31150 447 aa13.87□□□□□ -0.19
CKAP2-202ENST00000378034 GPC5P78333 572 aa13.87□□□□□ -0.19
CKAP2-202ENST00000378034 SIGLEC14Q08ET2 396 aa13.87□□□□□ -0.19
CKAP2-202ENST00000378034 GRM2Q14416 872 aa13.87□□□□□ -0.19
CKAP2-202ENST00000378034 MTF1Q14872 753 aa13.87□□□□□ -0.19
CKAP2-202ENST00000378034 CC2D1AQ6P1N0 951 aaPredicted RBP13.87□□□□□ -0.19
CKAP2-202ENST00000378034 RSRC2Q7L4I2 434 aaKnown RBP13.87□□□□□ -0.19
CKAP2-202ENST00000378034 GPIHBP1Q8IV16 184 aa13.87□□□□□ -0.19
CKAP2-202ENST00000378034 RNF139Q8WU17 664 aa13.87□□□□□ -0.19
CKAP2-202ENST00000378034 NDRG1Q92597 394 aaKnown RBP13.87□□□□□ -0.19
CKAP2-202ENST00000378034 KHSRPQ92945 711 aaKnown RBP eCLIP13.87□□□□□ -0.196e-6■■□□□ 13.6
CKAP2-202ENST00000378034 C18orf8Q96DM3 657 aa13.87□□□□□ -0.19
CKAP2-202ENST00000378034 LRRC3BQ96PB8 259 aa13.87□□□□□ -0.19
CKAP2-202ENST00000378034 BRD9Q9H8M2 597 aa13.87□□□□□ -0.19
CKAP2-202ENST00000378034 WNT16Q9UBV4 365 aa13.87□□□□□ -0.19
CKAP2-202ENST00000378034 STRIP2Q9ULQ0 834 aa13.87□□□□□ -0.19
CKAP2-202ENST00000378034 NARSO43776 548 aaKnown RBP13.87□□□□□ -0.19
CKAP2-202ENST00000378034 SCNN1AP37088 669 aa13.87□□□□□ -0.19
CKAP2-202ENST00000378034 KLHL30Q0D2K2 578 aa13.87□□□□□ -0.19
CKAP2-202ENST00000378034 PTPN20Q4JDL3 420 aa13.87□□□□□ -0.19
CKAP2-202ENST00000378034 EFHC1Q5JVL4 640 aa13.87□□□□□ -0.19
CKAP2-202ENST00000378034 TOGARAM2Q6ZUX3 1019 aa13.87□□□□□ -0.19
CKAP2-202ENST00000378034 CLEC4CQ8WTT0 213 aa13.87□□□□□ -0.19
CKAP2-202ENST00000378034 CPLX3Q8WVH0 158 aa13.87□□□□□ -0.19
CKAP2-202ENST00000378034 ZFRQ96KR1 1074 aaKnown RBP13.87□□□□□ -0.19
CKAP2-202ENST00000378034 KLF16Q9BXK1 252 aaPredicted RBP13.87□□□□□ -0.19
CKAP2-202ENST00000378034 A0A0C4DFX4 3053 aa13.86□□□□□ -0.19
CKAP2-202ENST00000378034 E2F8A0AVK6 867 aa13.86□□□□□ -0.19
CKAP2-202ENST00000378034 DLL1O00548 723 aa13.86□□□□□ -0.19
CKAP2-202ENST00000378034 SLC9A3R1O14745 358 aaPredicted RBP13.86□□□□□ -0.19
CKAP2-202ENST00000378034 TBX18O95935 607 aa13.86□□□□□ -0.19
CKAP2-202ENST00000378034 ERBB2P04626 1255 aa13.86□□□□□ -0.19
CKAP2-202ENST00000378034 UNGP13051 313 aaPredicted RBP13.86□□□□□ -0.19
CKAP2-202ENST00000378034 TNFAIP3P21580 790 aa13.86□□□□□ -0.19
CKAP2-202ENST00000378034 CASP14P31944 242 aa13.86□□□□□ -0.19
CKAP2-202ENST00000378034 MLLT6P55198 1093 aaPredicted RBP13.86□□□□□ -0.19
CKAP2-202ENST00000378034 YWHAZP63104 245 aaKnown RBP13.86□□□□□ -0.19
CKAP2-202ENST00000378034 COG7P83436 770 aa13.86□□□□□ -0.19
CKAP2-202ENST00000378034 ZXDBP98169 803 aa13.86□□□□□ -0.19
CKAP2-202ENST00000378034 PDGFRLQ15198 375 aa13.86□□□□□ -0.19
CKAP2-202ENST00000378034 CLEC16AQ2KHT3 1053 aa13.86□□□□□ -0.19
CKAP2-202ENST00000378034 NAA35Q5VZE5 725 aa13.86□□□□□ -0.19
CKAP2-202ENST00000378034 MSANTD2Q6P1R3 559 aa13.86□□□□□ -0.19
CKAP2-202ENST00000378034 DRC7Q8IY82 874 aa13.86□□□□□ -0.19
CKAP2-202ENST00000378034 CPA5Q8WXQ8 436 aa13.86□□□□□ -0.19
CKAP2-202ENST00000378034 MRFAP1L1Q96HT8 127 aa13.86□□□□□ -0.19
CKAP2-202ENST00000378034 SYT11Q9BT88 431 aa13.86□□□□□ -0.19
CKAP2-202ENST00000378034 SMPD4Q9NXE4 827 aa13.86□□□□□ -0.19
CKAP2-202ENST00000378034 AP5Z1O43299 807 aa13.85□□□□□ -0.19
CKAP2-202ENST00000378034 MMP8P22894 467 aa13.85□□□□□ -0.19
CKAP2-202ENST00000378034 HNRNPH3P31942 346 aaKnown RBP13.85□□□□□ -0.19
CKAP2-202ENST00000378034 NSFP46459 744 aaKnown RBP13.85□□□□□ -0.19
CKAP2-202ENST00000378034 KPNA1P52294 538 aaPredicted RBP13.85□□□□□ -0.19
CKAP2-202ENST00000378034 SLC6A3Q01959 620 aa13.85□□□□□ -0.19
CKAP2-202ENST00000378034 CENPCQ03188 943 aa13.85□□□□□ -0.19
CKAP2-202ENST00000378034 OR6B2Q6IFH4 312 aa13.85□□□□□ -0.19
CKAP2-202ENST00000378034 TRIM67Q6ZTA4 783 aa13.85□□□□□ -0.19
CKAP2-202ENST00000378034 HFE2Q6ZVN8 426 aa13.85□□□□□ -0.19
CKAP2-202ENST00000378034 OSCP1Q8WVF1 389 aa13.85□□□□□ -0.19
CKAP2-202ENST00000378034 FAM149B1Q96BN6 582 aa13.85□□□□□ -0.19
CKAP2-202ENST00000378034 PCDHB18PQ96TA0 734 aa13.85□□□□□ -0.19
CKAP2-202ENST00000378034 FAM83CQ9BQN1 747 aa13.85□□□□□ -0.19
CKAP2-202ENST00000378034 SMOC2Q9H3U7 446 aa13.85□□□□□ -0.19
CKAP2-202ENST00000378034 HAUS4Q9H6D7 363 aa13.85□□□□□ -0.19
CKAP2-202ENST00000378034 POPDC2Q9HBU9 364 aa13.85□□□□□ -0.19
CKAP2-202ENST00000378034 MARCH2Q9P0N8 246 aa13.85□□□□□ -0.19
CKAP2-202ENST00000378034 CFAP97Q9P2B7 532 aa13.85□□□□□ -0.19
CKAP2-202ENST00000378034 TBC1D14Q9P2M4 693 aa13.85□□□□□ -0.19
CKAP2-202ENST00000378034 VCANP13611 3396 aa13.85□□□□□ -0.19
CKAP2-202ENST00000378034 ARNTLO00327 626 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms