RNA–Protein interactions for RNA: ENST00000377843.6

CSNK1A1-202, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-202ENST00000377843 ITGA11Q9UKX5 1188 aa16.25■□□□□ 0.19
CSNK1A1-202ENST00000377843 TNRC6CQ9HCJ0 1690 aaKnown RBP16.25■□□□□ 0.19
CSNK1A1-202ENST00000377843 WEE2P0C1S8 567 aa16.25■□□□□ 0.19
CSNK1A1-202ENST00000377843 IRX4P78413 519 aa16.25■□□□□ 0.19
CSNK1A1-202ENST00000377843 CDK18Q07002 472 aa16.25■□□□□ 0.19
CSNK1A1-202ENST00000377843 SNRNP35Q16560 246 aaKnown RBP16.25■□□□□ 0.19
CSNK1A1-202ENST00000377843 PLEKHA7Q6IQ23 1121 aa16.25■□□□□ 0.19
CSNK1A1-202ENST00000377843 DHRS4L2Q6PKH6 230 aa16.25■□□□□ 0.19
CSNK1A1-202ENST00000377843 GALNT4Q8N4A0 578 aa16.25■□□□□ 0.19
CSNK1A1-202ENST00000377843 FBXL13Q8NEE6 735 aa16.25■□□□□ 0.19
CSNK1A1-202ENST00000377843 DQX1Q8TE96 717 aaKnown RBP16.25■□□□□ 0.19
CSNK1A1-202ENST00000377843 GFM2Q969S9 779 aaKnown RBP16.25■□□□□ 0.19
CSNK1A1-202ENST00000377843 ACCSQ96QU6 501 aa16.25■□□□□ 0.19
CSNK1A1-202ENST00000377843 Q9H521 79 aa16.25■□□□□ 0.19
CSNK1A1-202ENST00000377843 XAB2Q9HCS7 855 aaKnown RBP16.25■□□□□ 0.19
CSNK1A1-202ENST00000377843 BIRC5O15392 142 aa16.24■□□□□ 0.19
CSNK1A1-202ENST00000377843 ADCY6O43306 1168 aa16.24■□□□□ 0.19
CSNK1A1-202ENST00000377843 NELFEP18615 380 aaKnown RBP16.24■□□□□ 0.19
CSNK1A1-202ENST00000377843 CDKN2BP42772 138 aa16.24■□□□□ 0.19
CSNK1A1-202ENST00000377843 CDK9P50750 372 aaKnown RBP16.24■□□□□ 0.19
CSNK1A1-202ENST00000377843 YWHAGP61981 247 aaKnown RBP eCLIP16.24■□□□□ 0.19
CSNK1A1-202ENST00000377843 PHTF2Q8N3S3 785 aa16.24■□□□□ 0.19
CSNK1A1-202ENST00000377843 NACC1Q96RE7 527 aa16.24■□□□□ 0.19
CSNK1A1-202ENST00000377843 SENP7Q9BQF6 1050 aa16.24■□□□□ 0.19
CSNK1A1-202ENST00000377843 SLC2A11Q9BYW1 496 aa16.24■□□□□ 0.19
CSNK1A1-202ENST00000377843 PLGRKTQ9HBL7 147 aa16.24■□□□□ 0.19
CSNK1A1-202ENST00000377843 RRN3Q9NYV6 651 aa16.24■□□□□ 0.19
CSNK1A1-202ENST00000377843 RIMS3Q9UJD0 308 aa16.24■□□□□ 0.19
CSNK1A1-202ENST00000377843 DNAJC16Q9Y2G8 782 aa16.24■□□□□ 0.19
CSNK1A1-202ENST00000377843 ARHGEF35A5YM69 484 aa16.24■□□□□ 0.19
CSNK1A1-202ENST00000377843 TMX2-CTNND1H3BSU7 103 aa16.24■□□□□ 0.19
CSNK1A1-202ENST00000377843 BPGMP07738 259 aa16.24■□□□□ 0.19
CSNK1A1-202ENST00000377843 CPA3P15088 417 aa16.24■□□□□ 0.19
CSNK1A1-202ENST00000377843 UBXN2AP68543 259 aa16.24■□□□□ 0.19
CSNK1A1-202ENST00000377843 OGDHQ02218 1023 aa16.24■□□□□ 0.19
CSNK1A1-202ENST00000377843 EN1Q05925 392 aaPredicted RBP16.24■□□□□ 0.19
CSNK1A1-202ENST00000377843 PLA2G4FQ68DD2 849 aa16.24■□□□□ 0.19
CSNK1A1-202ENST00000377843 PCGF5Q86SE9 256 aa16.24■□□□□ 0.19
CSNK1A1-202ENST00000377843 UNC45BQ8IWX7 931 aa16.24■□□□□ 0.19
CSNK1A1-202ENST00000377843 PDIK1LQ8N165 341 aa16.24■□□□□ 0.19
CSNK1A1-202ENST00000377843 PPM1NQ8N819 430 aa16.24■□□□□ 0.19
CSNK1A1-202ENST00000377843 ACTL9Q8TC94 416 aa16.24■□□□□ 0.19
CSNK1A1-202ENST00000377843 TRIM11Q96F44 468 aa16.24■□□□□ 0.19
CSNK1A1-202ENST00000377843 RANBP9Q96S59 729 aa16.24■□□□□ 0.19
CSNK1A1-202ENST00000377843 PDGFDQ9GZP0 370 aaPredicted RBP16.24■□□□□ 0.19
CSNK1A1-202ENST00000377843 TMEM206Q9H813 350 aa16.24■□□□□ 0.19
CSNK1A1-202ENST00000377843 TMEM8AQ9HCN3 771 aa16.24■□□□□ 0.19
CSNK1A1-202ENST00000377843 C6orf203Q9P0P8 240 aaPredicted RBP16.24■□□□□ 0.19
CSNK1A1-202ENST00000377843 FBP2O00757 339 aa16.23■□□□□ 0.19
CSNK1A1-202ENST00000377843 PRELPP51888 382 aa16.23■□□□□ 0.19
CSNK1A1-202ENST00000377843 NOMO3P69849 1222 aa16.23■□□□□ 0.19
CSNK1A1-202ENST00000377843 OTUD4Q01804 1114 aaKnown RBP16.23■□□□□ 0.19
CSNK1A1-202ENST00000377843 STX3Q13277 289 aa16.23■□□□□ 0.19
CSNK1A1-202ENST00000377843 CYTH1Q15438 398 aa16.23■□□□□ 0.19
CSNK1A1-202ENST00000377843 VWA5B1Q5TIE3 1220 aa16.23■□□□□ 0.19
CSNK1A1-202ENST00000377843 SV2AQ7L0J3 742 aa16.23■□□□□ 0.19
CSNK1A1-202ENST00000377843 LPCAT2Q7L5N7 544 aa16.23■□□□□ 0.19
CSNK1A1-202ENST00000377843 CROCCP3Q8IVE0 287 aa16.23■□□□□ 0.19
CSNK1A1-202ENST00000377843 CTAGE3PQ8IX95 158 aa16.23■□□□□ 0.19
CSNK1A1-202ENST00000377843 PPP1R10Q96QC0 940 aaKnown RBP16.23■□□□□ 0.19
CSNK1A1-202ENST00000377843 CCT7Q99832 543 aa16.23■□□□□ 0.19
CSNK1A1-202ENST00000377843 LXNQ9BS40 222 aa16.23■□□□□ 0.19
CSNK1A1-202ENST00000377843 UNC45AQ9H3U1 944 aa16.23■□□□□ 0.19
CSNK1A1-202ENST00000377843 GPRC5CQ9NQ84 441 aa16.23■□□□□ 0.19
CSNK1A1-202ENST00000377843 SELENONQ9NZV5 590 aa16.23■□□□□ 0.19
CSNK1A1-202ENST00000377843 KIAA1522Q9P206 1035 aaPredicted RBP16.23■□□□□ 0.19
CSNK1A1-202ENST00000377843 RNF11Q9Y3C5 154 aa16.23■□□□□ 0.19
CSNK1A1-202ENST00000377843 GSRP00390 522 aa16.23■□□□□ 0.19
CSNK1A1-202ENST00000377843 MSX2P35548 267 aaPredicted RBP16.23■□□□□ 0.19
CSNK1A1-202ENST00000377843 MRPS22P82650 360 aaKnown RBP16.23■□□□□ 0.19
CSNK1A1-202ENST00000377843 CTBSQ01459 385 aa16.23■□□□□ 0.19
CSNK1A1-202ENST00000377843 ADGRE1Q14246 886 aa16.23■□□□□ 0.19
CSNK1A1-202ENST00000377843 CCDC92Q53HC0 331 aaPredicted RBP16.23■□□□□ 0.19
CSNK1A1-202ENST00000377843 TTC39BQ5VTQ0 682 aaPredicted RBP16.23■□□□□ 0.19
CSNK1A1-202ENST00000377843 PADI6Q6TGC4 694 aa16.23■□□□□ 0.19
CSNK1A1-202ENST00000377843 ARL10Q8N8L6 244 aa16.23■□□□□ 0.19
CSNK1A1-202ENST00000377843 FEZF2Q8TBJ5 459 aa16.23■□□□□ 0.19
CSNK1A1-202ENST00000377843 TMEM174Q8WUU8 243 aa16.23■□□□□ 0.19
CSNK1A1-202ENST00000377843 OSBPL6Q9BZF3 934 aa16.23■□□□□ 0.19
CSNK1A1-202ENST00000377843 ARMC7Q9H6L4 198 aa16.23■□□□□ 0.19
CSNK1A1-202ENST00000377843 COPS7BQ9H9Q2 264 aaPredicted RBP16.23■□□□□ 0.19
CSNK1A1-202ENST00000377843 PLAC1Q9HBJ0 212 aa16.23■□□□□ 0.19
CSNK1A1-202ENST00000377843 SMYD2Q9NRG4 433 aa16.23■□□□□ 0.19
CSNK1A1-202ENST00000377843 SORCS3Q9UPU3 1222 aa16.23■□□□□ 0.19
CSNK1A1-202ENST00000377843 AFG3L2Q9Y4W6 797 aa16.23■□□□□ 0.19
CSNK1A1-202ENST00000377843 ZNF831Q5JPB2 1677 aa16.22■□□□□ 0.19
CSNK1A1-202ENST00000377843 XPO1O14980 1071 aaKnown RBP16.22■□□□□ 0.19
CSNK1A1-202ENST00000377843 PDCD4Q53EL6 469 aaKnown RBP16.22■□□□□ 0.19
CSNK1A1-202ENST00000377843 TFDP3Q5H9I0 405 aa16.22■□□□□ 0.19
CSNK1A1-202ENST00000377843 LIN9Q5TKA1 542 aa16.22■□□□□ 0.19
CSNK1A1-202ENST00000377843 ITPRIPL1Q6GPH6 555 aa16.22■□□□□ 0.19
CSNK1A1-202ENST00000377843 TATDN1Q6P1N9 297 aa16.22■□□□□ 0.19
CSNK1A1-202ENST00000377843 POLNQ7Z5Q5 900 aa16.22■□□□□ 0.19
CSNK1A1-202ENST00000377843 SLC26A11Q86WA9 606 aa16.22■□□□□ 0.19
CSNK1A1-202ENST00000377843 KCTD17Q8N5Z5 321 aa16.22■□□□□ 0.19
CSNK1A1-202ENST00000377843 CCDC97Q96F63 343 aaPredicted RBP16.22■□□□□ 0.19
CSNK1A1-202ENST00000377843 SLC38A7Q9NVC3 462 aa16.22■□□□□ 0.19
CSNK1A1-202ENST00000377843 HERC5Q9UII4 1024 aaKnown RBP16.22■□□□□ 0.19
CSNK1A1-202ENST00000377843 TTLL3Q9Y4R7 772 aa16.22■□□□□ 0.19
CSNK1A1-202ENST00000377843 PCDHB2Q9Y5E7 798 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms