RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 TEX9Q8N6V9 391 aa15.12■□□□□ 0.01
MSH5-201ENST00000375703 PQLC3Q8N755 202 aa15.12■□□□□ 0.01
MSH5-201ENST00000375703 CNKSR2Q8WXI2 1034 aa15.12■□□□□ 0.01
MSH5-201ENST00000375703 COPS5Q92905 334 aa15.12■□□□□ 0.01
MSH5-201ENST00000375703 RTP4Q96DX8 246 aa15.12■□□□□ 0.01
MSH5-201ENST00000375703 SLC13A1Q9BZW2 595 aa15.12■□□□□ 0.01
MSH5-201ENST00000375703 NGRNQ9NPE2 291 aaKnown RBP15.12■□□□□ 0.01
MSH5-201ENST00000375703 ZNF180Q9UJW8 692 aa15.12■□□□□ 0.01
MSH5-201ENST00000375703 PLLPQ9Y342 182 aa15.12■□□□□ 0.01
MSH5-201ENST00000375703 LIN7AO14910 233 aaPredicted RBP15.11■□□□□ 0.01
MSH5-201ENST00000375703 SKAP2O75563 359 aaPredicted RBP15.11■□□□□ 0.01
MSH5-201ENST00000375703 MCF2P10911 925 aa15.11■□□□□ 0.01
MSH5-201ENST00000375703 SLC26A2P50443 739 aa15.11■□□□□ 0.01
MSH5-201ENST00000375703 VGLL4Q14135 290 aa15.11■□□□□ 0.01
MSH5-201ENST00000375703 SLC10A6Q3KNW5 377 aa15.11■□□□□ 0.01
MSH5-201ENST00000375703 C12orf29Q8N999 325 aa15.11■□□□□ 0.01
MSH5-201ENST00000375703 LRRN4Q8WUT4 740 aa15.11■□□□□ 0.01
MSH5-201ENST00000375703 CPB2Q96IY4 423 aa15.11■□□□□ 0.01
MSH5-201ENST00000375703 PPP1R16BQ96T49 567 aa15.11■□□□□ 0.01
MSH5-201ENST00000375703 POPDC2Q9HBU9 364 aa15.11■□□□□ 0.01
MSH5-201ENST00000375703 TAS2R1Q9NYW7 299 aa15.11■□□□□ 0.01
MSH5-201ENST00000375703 KIAA1257Q9ULG3 409 aa15.11■□□□□ 0.01
MSH5-201ENST00000375703 BCLAF3A2AJT9 711 aaKnown RBP15.11■□□□□ 0.01
MSH5-201ENST00000375703 I3L4J1 428 aa15.11■□□□□ 0.01
MSH5-201ENST00000375703 FCHO1O14526 889 aa15.11■□□□□ 0.01
MSH5-201ENST00000375703 SMNDC1O75940 238 aaKnown RBP eCLIP15.11■□□□□ 0.011e-8■■□□□ 12
MSH5-201ENST00000375703 PRKCHP24723 683 aa15.11■□□□□ 0.01
MSH5-201ENST00000375703 PHKA2P46019 1235 aa15.11■□□□□ 0.01
MSH5-201ENST00000375703 TMEM132DQ14C87 1099 aa15.11■□□□□ 0.01
MSH5-201ENST00000375703 CCDC6Q16204 474 aa15.11■□□□□ 0.01
MSH5-201ENST00000375703 TTC7BQ86TV6 843 aa15.11■□□□□ 0.01
MSH5-201ENST00000375703 TRIM42Q8IWZ5 723 aa15.11■□□□□ 0.01
MSH5-201ENST00000375703 PCDH19Q8TAB3 1148 aa15.11■□□□□ 0.01
MSH5-201ENST00000375703 SPDL1Q96EA4 605 aa15.11■□□□□ 0.01
MSH5-201ENST00000375703 MECRQ9BV79 373 aa15.11■□□□□ 0.01
MSH5-201ENST00000375703 NT5C1AQ9BXI3 368 aa15.11■□□□□ 0.01
MSH5-201ENST00000375703 RNPEPQ9H4A4 650 aa15.11■□□□□ 0.01
MSH5-201ENST00000375703 GBA2Q9HCG7 927 aaPredicted RBP15.11■□□□□ 0.01
MSH5-201ENST00000375703 PCDH18Q9HCL0 1135 aa15.11■□□□□ 0.01
MSH5-201ENST00000375703 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.11■□□□□ 0.01
MSH5-201ENST00000375703 PFKMP08237 780 aa15.1■□□□□ 0.01
MSH5-201ENST00000375703 ATP6V1C1P21283 382 aa15.1■□□□□ 0.01
MSH5-201ENST00000375703 TMPRSS15P98073 1019 aa15.1■□□□□ 0.01
MSH5-201ENST00000375703 ARMC2Q8NEN0 867 aa15.1■□□□□ 0.01
MSH5-201ENST00000375703 CCDC110Q8TBZ0 833 aa15.1■□□□□ 0.01
MSH5-201ENST00000375703 FAM172AQ8WUF8 416 aa15.1■□□□□ 0.01
MSH5-201ENST00000375703 NFKBIZQ9BYH8 718 aa15.1■□□□□ 0.01
MSH5-201ENST00000375703 STOML1Q9UBI4 398 aa15.1■□□□□ 0.01
MSH5-201ENST00000375703 A0A087WZ62 844 aa15.1■□□□□ 0.01
MSH5-201ENST00000375703 SLC15A5A6NIM6 579 aa15.1■□□□□ 0.01
MSH5-201ENST00000375703 RFPL1O75677 317 aa15.1■□□□□ 0.01
MSH5-201ENST00000375703 NEBLO76041 1014 aa15.1■□□□□ 0.01
MSH5-201ENST00000375703 APOEP02649 317 aa15.1■□□□□ 0.01
MSH5-201ENST00000375703 RBP5P82980 135 aa15.1■□□□□ 0.01
MSH5-201ENST00000375703 INCA1Q0VD86 236 aa15.1■□□□□ 0.01
MSH5-201ENST00000375703 KPNB1Q14974 876 aaKnown RBP15.1■□□□□ 0.01
MSH5-201ENST00000375703 CA9Q16790 459 aa15.1■□□□□ 0.01
MSH5-201ENST00000375703 ATG16L1Q676U5 607 aa15.1■□□□□ 0.01
MSH5-201ENST00000375703 SLC9A4Q6AI14 798 aa15.1■□□□□ 0.01
MSH5-201ENST00000375703 CAPRIN2Q6IMN6 1127 aaKnown RBP15.1■□□□□ 0.01
MSH5-201ENST00000375703 FBXO16Q8IX29 292 aaPredicted RBP15.1■□□□□ 0.01
MSH5-201ENST00000375703 E2F7Q96AV8 911 aa15.1■□□□□ 0.01
MSH5-201ENST00000375703 FDXACB1Q9BRP7 624 aaPredicted RBP15.1■□□□□ 0.01
MSH5-201ENST00000375703 SMYD2Q9NRG4 433 aa15.1■□□□□ 0.01
MSH5-201ENST00000375703 DPP3Q9NY33 737 aa15.1■□□□□ 0.01
MSH5-201ENST00000375703 ARMCX1Q9P291 453 aa15.1■□□□□ 0.01
MSH5-201ENST00000375703 PPP2R3BQ9Y5P8 575 aa15.1■□□□□ 0.01
MSH5-201ENST00000375703 EIF4E1BA6NMX2 242 aaKnown RBP15.09■□□□□ 0.01
MSH5-201ENST00000375703 UGT1A9O60656 530 aa15.09■□□□□ 0.01
MSH5-201ENST00000375703 KRT38O76015 456 aa15.09■□□□□ 0.01
MSH5-201ENST00000375703 TXNP10599 105 aaKnown RBP15.09■□□□□ 0.01
MSH5-201ENST00000375703 SDC4P31431 198 aa15.09■□□□□ 0.01
MSH5-201ENST00000375703 SESN3P58005 492 aa15.09■□□□□ 0.01
MSH5-201ENST00000375703 MRPS5P82675 430 aaKnown RBP15.09■□□□□ 0.01
MSH5-201ENST00000375703 BST1Q10588 318 aa15.09■□□□□ 0.01
MSH5-201ENST00000375703 BMPR2Q13873 1038 aa15.09■□□□□ 0.01
MSH5-201ENST00000375703 FAM187BQ17R55 369 aa15.09■□□□□ 0.01
MSH5-201ENST00000375703 TSNAXIP1Q2TAA8 658 aa15.09■□□□□ 0.01
MSH5-201ENST00000375703 PPP6R3Q5H9R7 873 aaPredicted RBP15.09■□□□□ 0.01
MSH5-201ENST00000375703 PMF1Q6P1K2 205 aa15.09■□□□□ 0.01
MSH5-201ENST00000375703 ALYREFQ86V81 257 aaKnown RBP15.09■□□□□ 0.01
MSH5-201ENST00000375703 NUDCD3Q8IVD9 361 aa15.09■□□□□ 0.01
MSH5-201ENST00000375703 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.09■□□□□ 0.01
MSH5-201ENST00000375703 TEKT4Q8WW24 435 aa15.09■□□□□ 0.01
MSH5-201ENST00000375703 DNAJC9Q8WXX5 260 aa15.09■□□□□ 0.01
MSH5-201ENST00000375703 LRRC39Q96DD0 335 aa15.09■□□□□ 0.01
MSH5-201ENST00000375703 SNRNP25Q9BV90 132 aaKnown RBP15.09■□□□□ 0.01
MSH5-201ENST00000375703 NMUR2Q9GZQ4 415 aa15.09■□□□□ 0.01
MSH5-201ENST00000375703 PDZD7Q9H5P4 517 aa15.09■□□□□ 0.01
MSH5-201ENST00000375703 UGT1A7Q9HAW7 530 aa15.09■□□□□ 0.01
MSH5-201ENST00000375703 UGT1A10Q9HAW8 530 aa15.09■□□□□ 0.01
MSH5-201ENST00000375703 UGT1A8Q9HAW9 530 aa15.09■□□□□ 0.01
MSH5-201ENST00000375703 PLAC1Q9HBJ0 212 aa15.09■□□□□ 0.01
MSH5-201ENST00000375703 KCNK4Q9NYG8 393 aa15.09■□□□□ 0.01
MSH5-201ENST00000375703 CORO1CQ9ULV4 474 aaPredicted RBP15.09■□□□□ 0.01
MSH5-201ENST00000375703 MAD1L1Q9Y6D9 718 aa15.09■□□□□ 0.01
MSH5-201ENST00000375703 SSC5DA1L4H1 1573 aa15.09■□□□□ 0.01
MSH5-201ENST00000375703 GOLGA7BQ2TAP0 167 aa15.09■□□□□ 0.01
MSH5-201ENST00000375703 ACSBG2Q5FVE4 666 aa15.09■□□□□ 0.01
MSH5-201ENST00000375703 UNC5AQ6ZN44 842 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms