RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 RBL1P28749 1068 aa17.36■□□□□ 0.37
VARS-215ENST00000375663 LAMB3Q13751 1172 aa17.36■□□□□ 0.37
VARS-215ENST00000375663 BTBD8Q5XKL5 378 aa17.36■□□□□ 0.37
VARS-215ENST00000375663 ZDHHC24Q6UX98 284 aa17.36■□□□□ 0.37
VARS-215ENST00000375663 PHF13Q86YI8 300 aaPredicted RBP17.36■□□□□ 0.37
VARS-215ENST00000375663 ATPAF2Q8N5M1 289 aa17.36■□□□□ 0.37
VARS-215ENST00000375663 LRRC15Q8TF66 581 aa17.36■□□□□ 0.37
VARS-215ENST00000375663 CYGBQ8WWM9 190 aa17.36■□□□□ 0.37
VARS-215ENST00000375663 SLC10A4Q96EP9 437 aa17.36■□□□□ 0.37
VARS-215ENST00000375663 PIH1D1Q9NWS0 290 aaKnown RBP17.36■□□□□ 0.37
VARS-215ENST00000375663 POLIQ9UNA4 740 aa17.36■□□□□ 0.37
VARS-215ENST00000375663 ITGAVP06756 1048 aa17.35■□□□□ 0.37
VARS-215ENST00000375663 TSPY1Q01534 308 aa17.35■□□□□ 0.37
VARS-215ENST00000375663 BST1Q10588 318 aa17.35■□□□□ 0.37
VARS-215ENST00000375663 PDAP1Q13442 181 aaKnown RBP17.35■□□□□ 0.37
VARS-215ENST00000375663 TMTC4Q5T4D3 741 aa17.35■□□□□ 0.37
VARS-215ENST00000375663 ZPBP2Q6X784 338 aa17.35■□□□□ 0.37
VARS-215ENST00000375663 FRA10AC1Q70Z53 315 aa17.35■□□□□ 0.37
VARS-215ENST00000375663 ABI1Q8IZP0 508 aa17.35■□□□□ 0.37
VARS-215ENST00000375663 ZDHHC18Q9NUE0 388 aa17.35■□□□□ 0.37
VARS-215ENST00000375663 CSDE1O75534 798 aaKnown RBP17.35■□□□□ 0.37
VARS-215ENST00000375663 STMN1P16949 149 aa17.35■□□□□ 0.37
VARS-215ENST00000375663 GLRA4Q5JXX5 417 aa17.35■□□□□ 0.37
VARS-215ENST00000375663 THEM5Q8N1Q8 247 aa17.35■□□□□ 0.37
VARS-215ENST00000375663 CDC26Q8NHZ8 85 aa17.35■□□□□ 0.37
VARS-215ENST00000375663 GDPD5Q8WTR4 605 aa17.35■□□□□ 0.37
VARS-215ENST00000375663 PDCD6IPQ8WUM4 868 aaKnown RBP17.35■□□□□ 0.37
VARS-215ENST00000375663 TCF7L2Q9NQB0 619 aa17.35■□□□□ 0.37
VARS-215ENST00000375663 hCG_1818297A0A087WSY0 165 aa17.35■□□□□ 0.37
VARS-215ENST00000375663 DCXO43602 365 aa17.35■□□□□ 0.37
VARS-215ENST00000375663 COLGALT1Q8NBJ5 622 aa17.35■□□□□ 0.37
VARS-215ENST00000375663 DDI1Q8WTU0 396 aa17.35■□□□□ 0.37
VARS-215ENST00000375663 ZC3H15Q8WU90 426 aaKnown RBP17.35■□□□□ 0.37
VARS-215ENST00000375663 PYDC1Q8WXC3 89 aa17.35■□□□□ 0.37
VARS-215ENST00000375663 TSPAN17Q96FV3 270 aa17.35■□□□□ 0.37
VARS-215ENST00000375663 SYNPO2Q9UMS6 1093 aa17.35■□□□□ 0.37
VARS-215ENST00000375663 ZMYM2Q9UBW7 1377 aa17.35■□□□□ 0.37
VARS-215ENST00000375663 TRPC5OSA6NMA1 111 aa17.35■□□□□ 0.37
VARS-215ENST00000375663 PSMC3P17980 439 aa17.35■□□□□ 0.37
VARS-215ENST00000375663 TFE3P19532 575 aaPredicted RBP17.35■□□□□ 0.37
VARS-215ENST00000375663 MAP4P27816 1152 aaKnown RBP17.35■□□□□ 0.37
VARS-215ENST00000375663 LAMTOR4Q0VGL1 99 aa17.35■□□□□ 0.37
VARS-215ENST00000375663 TSTA3Q13630 321 aaPredicted RBP17.35■□□□□ 0.37
VARS-215ENST00000375663 ANGEL2Q5VTE6 544 aaKnown RBP17.35■□□□□ 0.37
VARS-215ENST00000375663 C16orf46Q6P387 395 aa17.35■□□□□ 0.37
VARS-215ENST00000375663 TSPAN16Q9UKR8 245 aa17.35■□□□□ 0.37
VARS-215ENST00000375663 RPL26L1Q9UNX3 145 aaKnown RBP17.35■□□□□ 0.37
VARS-215ENST00000375663 A0A0B4J269 797 aa17.34■□□□□ 0.37
VARS-215ENST00000375663 NPTXRO95502 500 aa17.34■□□□□ 0.37
VARS-215ENST00000375663 CD4P01730 458 aa17.34■□□□□ 0.37
VARS-215ENST00000375663 MPP3Q13368 585 aa17.34■□□□□ 0.37
VARS-215ENST00000375663 BBS12Q6ZW61 710 aa17.34■□□□□ 0.37
VARS-215ENST00000375663 CCDC60Q8IWA6 550 aaPredicted RBP17.34■□□□□ 0.37
VARS-215ENST00000375663 NRDE2Q9H7Z3 1164 aa17.34■□□□□ 0.37
VARS-215ENST00000375663 PLOD1Q02809 727 aaPredicted RBP17.34■□□□□ 0.37
VARS-215ENST00000375663 SLC1A5Q15758 541 aa17.34■□□□□ 0.37
VARS-215ENST00000375663 PCSK7Q16549 785 aa17.34■□□□□ 0.37
VARS-215ENST00000375663 CNDP1Q96KN2 507 aa17.34■□□□□ 0.37
VARS-215ENST00000375663 TBCBQ99426 244 aa17.34■□□□□ 0.37
VARS-215ENST00000375663 CEP41Q9BYV8 373 aa17.34■□□□□ 0.37
VARS-215ENST00000375663 RHBDL2Q9NX52 303 aa17.34■□□□□ 0.37
VARS-215ENST00000375663 SNX13Q9Y5W8 968 aa17.34■□□□□ 0.37
VARS-215ENST00000375663 UBIAD1Q9Y5Z9 338 aa17.34■□□□□ 0.37
VARS-215ENST00000375663 TRDMT1O14717 391 aaKnown RBP17.34■□□□□ 0.37
VARS-215ENST00000375663 MYL3P08590 195 aa17.34■□□□□ 0.37
VARS-215ENST00000375663 GP5P40197 560 aa17.34■□□□□ 0.37
VARS-215ENST00000375663 DENND1BQ6P3S1 775 aa17.34■□□□□ 0.37
VARS-215ENST00000375663 CLNKQ7Z7G1 428 aa17.34■□□□□ 0.37
VARS-215ENST00000375663 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.34■□□□□ 0.377e-7■■■■■ 43.5
VARS-215ENST00000375663 KYQ8NBH2 561 aa17.34■□□□□ 0.37
VARS-215ENST00000375663 ADNPQ9H2P0 1102 aa17.34■□□□□ 0.37
VARS-215ENST00000375663 BCAS3Q9H6U6 928 aa17.34■□□□□ 0.37
VARS-215ENST00000375663 GGA3Q9NZ52 723 aa17.34■□□□□ 0.37
VARS-215ENST00000375663 SIGLEC16A6NMB1 481 aa17.33■□□□□ 0.37
VARS-215ENST00000375663 AVPR1AP37288 418 aa17.33■□□□□ 0.37
VARS-215ENST00000375663 ARHGDIAP52565 204 aa17.33■□□□□ 0.37
VARS-215ENST00000375663 CERKQ8TCT0 537 aa17.33■□□□□ 0.37
VARS-215ENST00000375663 TBC1D23Q9NUY8 699 aa17.33■□□□□ 0.37
VARS-215ENST00000375663 NCAM1P13591 858 aa17.33■□□□□ 0.36
VARS-215ENST00000375663 HDAC4P56524 1084 aa17.33■□□□□ 0.36
VARS-215ENST00000375663 R3HDM1Q15032 1099 aaKnown RBP17.33■□□□□ 0.36
VARS-215ENST00000375663 FAM83AQ86UY5 434 aa17.33■□□□□ 0.36
VARS-215ENST00000375663 TDRD5Q8NAT2 981 aaKnown RBP17.33■□□□□ 0.36
VARS-215ENST00000375663 PIWIL2Q8TC59 973 aaKnown RBP17.33■□□□□ 0.36
VARS-215ENST00000375663 ASAP3Q8TDY4 903 aa17.33■□□□□ 0.36
VARS-215ENST00000375663 DDIT4Q9NX09 232 aa17.33■□□□□ 0.36
VARS-215ENST00000375663 WDR27A2RRH5 827 aa17.33■□□□□ 0.36
VARS-215ENST00000375663 WFS1O76024 890 aa17.33■□□□□ 0.36
VARS-215ENST00000375663 RAG1P15918 1043 aa17.33■□□□□ 0.36
VARS-215ENST00000375663 NDST1P52848 882 aa17.33■□□□□ 0.36
VARS-215ENST00000375663 THEMIS2Q5TEJ8 643 aa17.33■□□□□ 0.36
VARS-215ENST00000375663 MFN1Q8IWA4 741 aa17.33■□□□□ 0.36
VARS-215ENST00000375663 RNF148Q8N7C7 305 aa17.33■□□□□ 0.36
VARS-215ENST00000375663 OR5B17Q8NGF7 314 aa17.33■□□□□ 0.36
VARS-215ENST00000375663 HELQQ8TDG4 1101 aa17.33■□□□□ 0.36
VARS-215ENST00000375663 LRRC39Q96DD0 335 aa17.33■□□□□ 0.36
VARS-215ENST00000375663 IARS2Q9NSE4 1012 aaKnown RBP17.33■□□□□ 0.36
VARS-215ENST00000375663 SLC17A7Q9P2U7 560 aa17.33■□□□□ 0.36
VARS-215ENST00000375663 RUVBL2Q9Y230 463 aaKnown RBP17.33■□□□□ 0.36
VARS-215ENST00000375663 PCDHA2Q9Y5H9 948 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms