RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 CD1EP15812 388 aa12.24□□□□□ -0.45
MCF2L-202ENST00000375597 CCNFP41002 786 aa12.24□□□□□ -0.45
MCF2L-202ENST00000375597 DEUP1Q05D60 604 aa12.24□□□□□ -0.45
MCF2L-202ENST00000375597 C1QBPQ07021 282 aaKnown RBP12.24□□□□□ -0.45
MCF2L-202ENST00000375597 PIGHQ14442 188 aaPredicted RBP12.24□□□□□ -0.45
MCF2L-202ENST00000375597 ACAP1Q15027 740 aa12.24□□□□□ -0.45
MCF2L-202ENST00000375597 PAOXQ6QHF9 649 aa12.24□□□□□ -0.45
MCF2L-202ENST00000375597 LAYNQ6UX15 382 aa12.24□□□□□ -0.45
MCF2L-202ENST00000375597 CTU1Q7Z7A3 348 aaKnown RBP12.24□□□□□ -0.45
MCF2L-202ENST00000375597 HPS6Q86YV9 775 aa12.24□□□□□ -0.45
MCF2L-202ENST00000375597 ZSCAN18Q8TBC5 510 aaPredicted RBP12.24□□□□□ -0.45
MCF2L-202ENST00000375597 ABTB1Q969K4 478 aaPredicted RBP12.24□□□□□ -0.45
MCF2L-202ENST00000375597 LGMNQ99538 433 aa12.24□□□□□ -0.45
MCF2L-202ENST00000375597 CGRRF1Q99675 332 aa12.24□□□□□ -0.45
MCF2L-202ENST00000375597 OXCT2Q9BYC2 517 aaPredicted RBP12.24□□□□□ -0.45
MCF2L-202ENST00000375597 ACSS3Q9H6R3 686 aa12.24□□□□□ -0.45
MCF2L-202ENST00000375597 MYOZ2Q9NPC6 264 aa12.24□□□□□ -0.45
MCF2L-202ENST00000375597 SHOC2Q9UQ13 582 aa12.24□□□□□ -0.45
MCF2L-202ENST00000375597 AFG3L2Q9Y4W6 797 aa12.24□□□□□ -0.45
MCF2L-202ENST00000375597 MYH9P35579 1960 aaKnown RBP12.24□□□□□ -0.45
MCF2L-202ENST00000375597 TBXAS1P24557 533 aaPredicted RBP12.24□□□□□ -0.45
MCF2L-202ENST00000375597 ITGA9Q13797 1035 aa12.24□□□□□ -0.45
MCF2L-202ENST00000375597 TMCO4Q5TGY1 634 aa12.24□□□□□ -0.45
MCF2L-202ENST00000375597 OLFML2BQ68BL8 750 aa12.24□□□□□ -0.45
MCF2L-202ENST00000375597 B3GNT9Q6UX72 402 aa12.24□□□□□ -0.45
MCF2L-202ENST00000375597 RNF135Q8IUD6 432 aa12.24□□□□□ -0.45
MCF2L-202ENST00000375597 DEFB107AQ8IZN7 70 aa12.24□□□□□ -0.45
MCF2L-202ENST00000375597 DNAAF3Q8N9W5 541 aa12.24□□□□□ -0.45
MCF2L-202ENST00000375597 OR6B3Q8NGW1 331 aa12.24□□□□□ -0.45
MCF2L-202ENST00000375597 USP33Q8TEY7 942 aa12.24□□□□□ -0.45
MCF2L-202ENST00000375597 EBF3Q9H4W6 596 aa12.24□□□□□ -0.45
MCF2L-202ENST00000375597 ANLNQ9NQW6 1124 aa12.24□□□□□ -0.45
MCF2L-202ENST00000375597 CACNG4Q9UBN1 327 aa12.24□□□□□ -0.45
MCF2L-202ENST00000375597 WDR46O15213 610 aaKnown RBP12.23□□□□□ -0.45
MCF2L-202ENST00000375597 KRT7P08729 469 aa12.23□□□□□ -0.45
MCF2L-202ENST00000375597 KCNA2P16389 499 aa12.23□□□□□ -0.45
MCF2L-202ENST00000375597 DPEP1P16444 411 aa12.23□□□□□ -0.45
MCF2L-202ENST00000375597 GNAZP19086 355 aa12.23□□□□□ -0.45
MCF2L-202ENST00000375597 GARTP22102 1010 aa12.23□□□□□ -0.45
MCF2L-202ENST00000375597 FGFR3P22607 806 aa12.23□□□□□ -0.45
MCF2L-202ENST00000375597 CYTH1Q15438 398 aa12.23□□□□□ -0.45
MCF2L-202ENST00000375597 DLG2Q15700 870 aa12.23□□□□□ -0.45
MCF2L-202ENST00000375597 SPDYE2Q495Y8 402 aa12.23□□□□□ -0.45
MCF2L-202ENST00000375597 BANPQ8N9N5 519 aa12.23□□□□□ -0.45
MCF2L-202ENST00000375597 FAM172AQ8WUF8 416 aa12.23□□□□□ -0.45
MCF2L-202ENST00000375597 RPF1Q9H9Y2 349 aaKnown RBP12.23□□□□□ -0.45
MCF2L-202ENST00000375597 KLK14Q9P0G3 267 aa12.23□□□□□ -0.45
MCF2L-202ENST00000375597 A6NJR5 290 aa12.23□□□□□ -0.45
MCF2L-202ENST00000375597 MICAL2O94851 1124 aa12.23□□□□□ -0.45
MCF2L-202ENST00000375597 SUPT20HL2P0C7V6 817 aa12.23□□□□□ -0.45
MCF2L-202ENST00000375597 ALADP13716 330 aa12.23□□□□□ -0.45
MCF2L-202ENST00000375597 CALRP27797 417 aaKnown RBP12.23□□□□□ -0.45
MCF2L-202ENST00000375597 TGFB2P61812 414 aa12.23□□□□□ -0.45
MCF2L-202ENST00000375597 HSDL1Q3SXM5 330 aa12.23□□□□□ -0.45
MCF2L-202ENST00000375597 SUPT20HL1Q3ZLR7 823 aa12.23□□□□□ -0.45
MCF2L-202ENST00000375597 FASTKD1Q53R41 847 aaKnown RBP12.23□□□□□ -0.45
MCF2L-202ENST00000375597 N4BP2L1Q5TBK1 243 aaPredicted RBP12.23□□□□□ -0.45
MCF2L-202ENST00000375597 ZBTB8OSQ8IWT0 167 aa12.23□□□□□ -0.45
MCF2L-202ENST00000375597 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.23□□□□□ -0.453e-6■□□□□ 10.2
MCF2L-202ENST00000375597 ULK2Q8IYT8 1036 aa12.23□□□□□ -0.45
MCF2L-202ENST00000375597 APOPT1Q96IL0 206 aa12.23□□□□□ -0.45
MCF2L-202ENST00000375597 ZNF333Q96JL9 665 aa12.23□□□□□ -0.45
MCF2L-202ENST00000375597 SCYL1Q96KG9 808 aa12.23□□□□□ -0.45
MCF2L-202ENST00000375597 RHBDL2Q9NX52 303 aa12.23□□□□□ -0.45
MCF2L-202ENST00000375597 ARHGAP28Q9P2N2 729 aa12.23□□□□□ -0.45
MCF2L-202ENST00000375597 ADCY3O60266 1144 aa12.23□□□□□ -0.45
MCF2L-202ENST00000375597 AMHP03971 560 aa12.23□□□□□ -0.45
MCF2L-202ENST00000375597 ENO3P13929 434 aaPredicted RBP12.23□□□□□ -0.45
MCF2L-202ENST00000375597 TYK2P29597 1187 aa12.23□□□□□ -0.45
MCF2L-202ENST00000375597 GNL1P36915 607 aaPredicted RBP12.23□□□□□ -0.45
MCF2L-202ENST00000375597 MRPS35P82673 323 aaKnown RBP12.23□□□□□ -0.45
MCF2L-202ENST00000375597 MYBPC2Q14324 1141 aa12.23□□□□□ -0.45
MCF2L-202ENST00000375597 FBXO16Q8IX29 292 aaPredicted RBP12.23□□□□□ -0.45
MCF2L-202ENST00000375597 MICALL2Q8IY33 904 aa12.23□□□□□ -0.45
MCF2L-202ENST00000375597 SAMD3Q8N6K7 520 aa12.23□□□□□ -0.45
MCF2L-202ENST00000375597 CNBD2Q96M20 576 aa12.23□□□□□ -0.45
MCF2L-202ENST00000375597 SLC7A8Q9UHI5 535 aa12.23□□□□□ -0.45
MCF2L-202ENST00000375597 CNTNAP1P78357 1384 aa12.22□□□□□ -0.45
MCF2L-202ENST00000375597 SLC26A4O43511 780 aa12.22□□□□□ -0.45
MCF2L-202ENST00000375597 ONECUT3O60422 494 aaPredicted RBP12.22□□□□□ -0.45
MCF2L-202ENST00000375597 PEX2P28328 305 aa12.22□□□□□ -0.45
MCF2L-202ENST00000375597 IRX1P78414 480 aaPredicted RBP12.22□□□□□ -0.45
MCF2L-202ENST00000375597 PTP4A2Q12974 167 aa12.22□□□□□ -0.45
MCF2L-202ENST00000375597 STXBP2Q15833 593 aa12.22□□□□□ -0.45
MCF2L-202ENST00000375597 EFHC2Q5JST6 749 aa12.22□□□□□ -0.45
MCF2L-202ENST00000375597 PHF13Q86YI8 300 aaPredicted RBP12.22□□□□□ -0.45
MCF2L-202ENST00000375597 TP53INP2Q8IXH6 220 aa12.22□□□□□ -0.45
MCF2L-202ENST00000375597 CCNYL1Q8N7R7 359 aa12.22□□□□□ -0.45
MCF2L-202ENST00000375597 SNRNP27Q8WVK2 155 aaKnown RBP12.22□□□□□ -0.45
MCF2L-202ENST00000375597 ERLEC1Q96DZ1 483 aa12.22□□□□□ -0.45
MCF2L-202ENST00000375597 MINDY3Q9H8M7 445 aa12.22□□□□□ -0.45
MCF2L-202ENST00000375597 SENP1Q9P0U3 644 aa12.22□□□□□ -0.45
MCF2L-202ENST00000375597 HACL1Q9UJ83 578 aa12.22□□□□□ -0.45
MCF2L-202ENST00000375597 PRPF4O43172 522 aaKnown RBP eCLIP12.22□□□□□ -0.452e-6■■■□□ 15.5
MCF2L-202ENST00000375597 METTL18O95568 372 aa12.22□□□□□ -0.45
MCF2L-202ENST00000375597 SNRPAP09012 282 aaKnown RBP12.22□□□□□ -0.45
MCF2L-202ENST00000375597 NDST1P52848 882 aa12.22□□□□□ -0.45
MCF2L-202ENST00000375597 LAMTOR4Q0VGL1 99 aa12.22□□□□□ -0.45
MCF2L-202ENST00000375597 HIC1Q14526 733 aa12.22□□□□□ -0.45
MCF2L-202ENST00000375597 CES4AQ5XG92 561 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms