RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 MTMR2Q13614 643 aa9.4□□□□□ -0.91
UBR4-201ENST00000375218 CCINQ13939 588 aa9.4□□□□□ -0.91
UBR4-201ENST00000375218 OR7E24Q6IFN5 339 aa9.4□□□□□ -0.91
UBR4-201ENST00000375218 RRAGAQ7L523 313 aa9.4□□□□□ -0.91
UBR4-201ENST00000375218 SLFN11Q7Z7L1 901 aa9.4□□□□□ -0.91
UBR4-201ENST00000375218 PALB2Q86YC2 1186 aa9.4□□□□□ -0.91
UBR4-201ENST00000375218 CNTROBQ8N137 903 aa9.4□□□□□ -0.91
UBR4-201ENST00000375218 SLC43A2Q8N370 569 aa9.4□□□□□ -0.91
UBR4-201ENST00000375218 SFRP1Q8N474 314 aa9.4□□□□□ -0.91
UBR4-201ENST00000375218 GLB1L3Q8NCI6 653 aaPredicted RBP9.4□□□□□ -0.91
UBR4-201ENST00000375218 OR9A1PQ8NGU1 263 aa9.4□□□□□ -0.91
UBR4-201ENST00000375218 CALML4Q96GE6 196 aa9.4□□□□□ -0.91
UBR4-201ENST00000375218 SIK3Q9Y2K2 1263 aa9.4□□□□□ -0.91
UBR4-201ENST00000375218 TNPO3Q9Y5L0 923 aaKnown RBP9.4□□□□□ -0.91
UBR4-201ENST00000375218 AOX1Q06278 1338 aa9.39□□□□□ -0.91
UBR4-201ENST00000375218 A0A1W2PQ67 120 aa9.39□□□□□ -0.91
UBR4-201ENST00000375218 FAM47DPA6NHR8 397 aa9.39□□□□□ -0.91
UBR4-201ENST00000375218 E7ENQ6 273 aa9.39□□□□□ -0.91
UBR4-201ENST00000375218 DAPK3O43293 454 aa9.39□□□□□ -0.91
UBR4-201ENST00000375218 EFCAB14O75071 495 aa9.39□□□□□ -0.91
UBR4-201ENST00000375218 STAU1O95793 577 aaKnown RBP9.39□□□□□ -0.91
UBR4-201ENST00000375218 RETP07949 1114 aa9.39□□□□□ -0.91
UBR4-201ENST00000375218 CCT6AP40227 531 aaKnown RBP9.39□□□□□ -0.91
UBR4-201ENST00000375218 ETV5P41161 510 aa9.39□□□□□ -0.91
UBR4-201ENST00000375218 RPS26P62854 115 aaKnown RBP9.39□□□□□ -0.91
UBR4-201ENST00000375218 HNRNPDQ14103 355 aaKnown RBP9.39□□□□□ -0.91
UBR4-201ENST00000375218 TRIM25Q14258 630 aaKnown RBP9.39□□□□□ -0.91
UBR4-201ENST00000375218 INSCQ1MX18 579 aa9.39□□□□□ -0.91
UBR4-201ENST00000375218 GMCL1P1Q8NEA9 526 aa9.39□□□□□ -0.91
UBR4-201ENST00000375218 LBHD1Q9BQE6 289 aaPredicted RBP9.39□□□□□ -0.91
UBR4-201ENST00000375218 MVB12BQ9H7P6 319 aa9.39□□□□□ -0.91
UBR4-201ENST00000375218 TUFT1Q9NNX1 390 aa9.39□□□□□ -0.91
UBR4-201ENST00000375218 FAM86C1Q9NVL1 165 aa9.39□□□□□ -0.91
UBR4-201ENST00000375218 POMT1Q9Y6A1 747 aa9.39□□□□□ -0.91
UBR4-201ENST00000375218 C5orf42Q9H799 3197 aa9.39□□□□□ -0.91
UBR4-201ENST00000375218 RBBP6Q7Z6E9 1792 aaKnown RBP9.39□□□□□ -0.91
UBR4-201ENST00000375218 UBE2Q2LH0YL09 131 aa9.39□□□□□ -0.91
UBR4-201ENST00000375218 ADAMTS3O15072 1205 aa9.39□□□□□ -0.91
UBR4-201ENST00000375218 DSG3P32926 999 aa9.39□□□□□ -0.91
UBR4-201ENST00000375218 ADAM17P78536 824 aa9.39□□□□□ -0.91
UBR4-201ENST00000375218 DNAJC3Q13217 504 aa9.39□□□□□ -0.91
UBR4-201ENST00000375218 TBCELQ5QJ74 424 aa9.39□□□□□ -0.91
UBR4-201ENST00000375218 ARHGAP18Q8N392 663 aa9.39□□□□□ -0.91
UBR4-201ENST00000375218 ETNPPLQ8TBG4 499 aa9.39□□□□□ -0.91
UBR4-201ENST00000375218 STARD8Q92502 1023 aa9.39□□□□□ -0.91
UBR4-201ENST00000375218 OPA3Q9H6K4 179 aa9.39□□□□□ -0.91
UBR4-201ENST00000375218 CAPN11Q9UMQ6 739 aa9.39□□□□□ -0.91
UBR4-201ENST00000375218 SNX14Q9Y5W7 946 aa9.39□□□□□ -0.91
UBR4-201ENST00000375218 SMIM30A4D0T7 59 aa9.39□□□□□ -0.91
UBR4-201ENST00000375218 URADA6NGE7 173 aa9.39□□□□□ -0.91
UBR4-201ENST00000375218 SMAD6O43541 496 aaKnown RBP9.39□□□□□ -0.91
UBR4-201ENST00000375218 GNAI3P08754 354 aa9.39□□□□□ -0.91
UBR4-201ENST00000375218 RBP5P82980 135 aa9.39□□□□□ -0.91
UBR4-201ENST00000375218 CUL3Q13618 768 aa9.39□□□□□ -0.91
UBR4-201ENST00000375218 RAPSNQ13702 412 aa9.39□□□□□ -0.91
UBR4-201ENST00000375218 GRIK4Q16099 956 aa9.39□□□□□ -0.91
UBR4-201ENST00000375218 TEX35Q5T0J7 233 aa9.39□□□□□ -0.91
UBR4-201ENST00000375218 PPP1R26Q5T8A7 1209 aaPredicted RBP9.39□□□□□ -0.91
UBR4-201ENST00000375218 FGD2Q7Z6J4 655 aa9.39□□□□□ -0.91
UBR4-201ENST00000375218 FANCEQ9HB96 536 aa9.39□□□□□ -0.91
UBR4-201ENST00000375218 FAM198AQ9UFP1 575 aa9.39□□□□□ -0.91
UBR4-201ENST00000375218 ZNF804BA4D1E1 1349 aa9.39□□□□□ -0.91
UBR4-201ENST00000375218 NAV1Q8NEY1 1877 aa9.39□□□□□ -0.91
UBR4-201ENST00000375218 PARP14Q460N5 1801 aa9.38□□□□□ -0.91
UBR4-201ENST00000375218 A0A1W2PRV1 198 aa9.38□□□□□ -0.91
UBR4-201ENST00000375218 LILRB5O75023 590 aa9.38□□□□□ -0.91
UBR4-201ENST00000375218 AFPP02771 609 aaKnown RBP9.38□□□□□ -0.91
UBR4-201ENST00000375218 PCCAP05165 728 aaPredicted RBP9.38□□□□□ -0.91
UBR4-201ENST00000375218 MAPKAPK2P49137 400 aa9.38□□□□□ -0.91
UBR4-201ENST00000375218 KYAT1Q16773 422 aa9.38□□□□□ -0.91
UBR4-201ENST00000375218 ANKRD40Q6AI12 368 aa9.38□□□□□ -0.91
UBR4-201ENST00000375218 TRIM72Q6ZMU5 477 aa9.38□□□□□ -0.91
UBR4-201ENST00000375218 CHST15Q7LFX5 561 aaPredicted RBP9.38□□□□□ -0.91
UBR4-201ENST00000375218 ANKRD13CQ8N6S4 541 aa9.38□□□□□ -0.91
UBR4-201ENST00000375218 TMEM145Q8NBT3 493 aa9.38□□□□□ -0.91
UBR4-201ENST00000375218 SIMC1Q8NDZ2 872 aa9.38□□□□□ -0.91
UBR4-201ENST00000375218 TAS2R3Q9NYW6 316 aa9.38□□□□□ -0.91
UBR4-201ENST00000375218 PTPN22Q9Y2R2 807 aa9.38□□□□□ -0.91
UBR4-201ENST00000375218 SEC22BO75396 215 aa9.38□□□□□ -0.91
UBR4-201ENST00000375218 PIGNO95427 931 aa9.38□□□□□ -0.91
UBR4-201ENST00000375218 PRKCIP41743 596 aa9.38□□□□□ -0.91
UBR4-201ENST00000375218 GBX2P52951 348 aaPredicted RBP9.38□□□□□ -0.91
UBR4-201ENST00000375218 TOB2Q14106 344 aaPredicted RBP9.38□□□□□ -0.91
UBR4-201ENST00000375218 NCAPHQ15003 741 aa9.38□□□□□ -0.91
UBR4-201ENST00000375218 PFKFB3Q16875 520 aaPredicted RBP9.38□□□□□ -0.91
UBR4-201ENST00000375218 TPTE2Q6XPS3 522 aa9.38□□□□□ -0.91
UBR4-201ENST00000375218 PSTKQ8IV42 348 aaKnown RBP9.38□□□□□ -0.91
UBR4-201ENST00000375218 PEX13Q92968 403 aa9.38□□□□□ -0.91
UBR4-201ENST00000375218 TRIM43Q96BQ3 446 aaPredicted RBP9.38□□□□□ -0.91
UBR4-201ENST00000375218 RAD21L1Q9H4I0 556 aa9.38□□□□□ -0.91
UBR4-201ENST00000375218 TRPM5Q9NZQ8 1165 aa9.38□□□□□ -0.91
UBR4-201ENST00000375218 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.38□□□□□ -0.91
UBR4-201ENST00000375218 SALL4Q9UJQ4 1053 aa9.38□□□□□ -0.91
UBR4-201ENST00000375218 PCDHB6Q9Y5E3 794 aa9.38□□□□□ -0.91
UBR4-201ENST00000375218 CNTNAP4Q9C0A0 1308 aa9.38□□□□□ -0.91
UBR4-201ENST00000375218 GOLGA6L9A6NEM1 432 aa9.38□□□□□ -0.91
UBR4-201ENST00000375218 GMNNO75496 209 aa9.38□□□□□ -0.91
UBR4-201ENST00000375218 ACADMP11310 421 aa9.38□□□□□ -0.91
UBR4-201ENST00000375218 TDGQ13569 410 aa9.38□□□□□ -0.91
UBR4-201ENST00000375218 RNASEH2BQ5TBB1 312 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms