RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 LEMD2Q8NC56 503 aa11.55□□□□□ -0.56
HLA-DQA1-202ENST00000374949 APPL2Q8NEU8 664 aa11.55□□□□□ -0.56
HLA-DQA1-202ENST00000374949 TTC8Q8TAM2 541 aa11.55□□□□□ -0.56
HLA-DQA1-202ENST00000374949 CSGALNACT1Q8TDX6 532 aa11.55□□□□□ -0.56
HLA-DQA1-202ENST00000374949 DDX1Q92499 740 aaKnown RBP11.55□□□□□ -0.56
HLA-DQA1-202ENST00000374949 C16orf45Q96MC5 204 aaPredicted RBP11.55□□□□□ -0.56
HLA-DQA1-202ENST00000374949 DNAI2Q9GZS0 605 aa11.55□□□□□ -0.56
HLA-DQA1-202ENST00000374949 SDCBP2Q9H190 292 aa11.55□□□□□ -0.56
HLA-DQA1-202ENST00000374949 PDCL3Q9H2J4 239 aa11.55□□□□□ -0.56
HLA-DQA1-202ENST00000374949 CRISPLD1Q9H336 500 aa11.55□□□□□ -0.56
HLA-DQA1-202ENST00000374949 SMYD3Q9H7B4 428 aa11.55□□□□□ -0.56
HLA-DQA1-202ENST00000374949 TRPV4Q9HBA0 871 aa11.55□□□□□ -0.56
HLA-DQA1-202ENST00000374949 ACP6Q9NPH0 428 aa11.55□□□□□ -0.56
HLA-DQA1-202ENST00000374949 SEMA4GQ9NTN9 838 aa11.55□□□□□ -0.56
HLA-DQA1-202ENST00000374949 C2orf42Q9NWW7 574 aa11.55□□□□□ -0.56
HLA-DQA1-202ENST00000374949 INTUQ9ULD6 942 aa11.55□□□□□ -0.56
HLA-DQA1-202ENST00000374949 KIAA1257Q9ULG3 409 aa11.55□□□□□ -0.56
HLA-DQA1-202ENST00000374949 NENFQ9UMX5 172 aa11.55□□□□□ -0.56
HLA-DQA1-202ENST00000374949 PCDHB8Q9UN66 801 aa11.55□□□□□ -0.56
HLA-DQA1-202ENST00000374949 TIMM13Q9Y5L4 95 aaPredicted RBP11.55□□□□□ -0.56
HLA-DQA1-202ENST00000374949 SNX9Q9Y5X1 595 aa11.55□□□□□ -0.56
HLA-DQA1-202ENST00000374949 SPAG17Q6Q759 2223 aa11.55□□□□□ -0.56
HLA-DQA1-202ENST00000374949 SDK1Q7Z5N4 2213 aa11.55□□□□□ -0.56
HLA-DQA1-202ENST00000374949 GREB1Q4ZG55 1949 aa11.54□□□□□ -0.56
HLA-DQA1-202ENST00000374949 CEP295Q9C0D2 2601 aa11.54□□□□□ -0.56
HLA-DQA1-202ENST00000374949 A0A0U1RQJ8 604 aa11.54□□□□□ -0.56
HLA-DQA1-202ENST00000374949 RCCD1A6NED2 376 aa11.54□□□□□ -0.56
HLA-DQA1-202ENST00000374949 K7ESF4 209 aa11.54□□□□□ -0.56
HLA-DQA1-202ENST00000374949 THAP12O43422 761 aa11.54□□□□□ -0.56
HLA-DQA1-202ENST00000374949 HRO43593 1189 aa11.54□□□□□ -0.56
HLA-DQA1-202ENST00000374949 KIF5CO60282 957 aa11.54□□□□□ -0.56
HLA-DQA1-202ENST00000374949 GDF9O60383 454 aa11.54□□□□□ -0.56
HLA-DQA1-202ENST00000374949 RTN2O75298 545 aa11.54□□□□□ -0.56
HLA-DQA1-202ENST00000374949 CILPO75339 1184 aa11.54□□□□□ -0.56
HLA-DQA1-202ENST00000374949 KPNA1P52294 538 aaPredicted RBP11.54□□□□□ -0.56
HLA-DQA1-202ENST00000374949 LILRA4P59901 499 aa11.54□□□□□ -0.56
HLA-DQA1-202ENST00000374949 FMO1Q01740 532 aa11.54□□□□□ -0.56
HLA-DQA1-202ENST00000374949 INCA1Q0VD86 236 aa11.54□□□□□ -0.56
HLA-DQA1-202ENST00000374949 LRRC32Q14392 662 aa11.54□□□□□ -0.56
HLA-DQA1-202ENST00000374949 ZNF394Q53GI3 561 aa11.54□□□□□ -0.56
HLA-DQA1-202ENST00000374949 TXNDC11Q6PKC3 985 aa11.54□□□□□ -0.56
HLA-DQA1-202ENST00000374949 TRIM72Q6ZMU5 477 aa11.54□□□□□ -0.56
HLA-DQA1-202ENST00000374949 DPH6Q7L8W6 267 aa11.54□□□□□ -0.56
HLA-DQA1-202ENST00000374949 MFSD6LQ8IWD5 586 aa11.54□□□□□ -0.56
HLA-DQA1-202ENST00000374949 OLIG1Q8TAK6 271 aa11.54□□□□□ -0.56
HLA-DQA1-202ENST00000374949 ZNF606Q8WXB4 792 aa11.54□□□□□ -0.56
HLA-DQA1-202ENST00000374949 TMEM176AQ96HP8 235 aa11.54□□□□□ -0.56
HLA-DQA1-202ENST00000374949 ZFYVE19Q96K21 471 aa11.54□□□□□ -0.56
HLA-DQA1-202ENST00000374949 PCDHB18PQ96TA0 734 aa11.54□□□□□ -0.56
HLA-DQA1-202ENST00000374949 LRRC3Q9BY71 257 aa11.54□□□□□ -0.56
HLA-DQA1-202ENST00000374949 LACRTQ9GZZ8 138 aa11.54□□□□□ -0.56
HLA-DQA1-202ENST00000374949 GUCA1BQ9UMX6 200 aa11.54□□□□□ -0.56
HLA-DQA1-202ENST00000374949 ATP8B3O60423 1300 aa11.54□□□□□ -0.56
HLA-DQA1-202ENST00000374949 ZFHX4Q86UP3 3567 aa11.53□□□□□ -0.56
HLA-DQA1-202ENST00000374949 CHD6Q8TD26 2715 aa11.53□□□□□ -0.56
HLA-DQA1-202ENST00000374949 BTNL10A8MVZ5 291 aa11.53□□□□□ -0.56
HLA-DQA1-202ENST00000374949 TMCO5BA8MYB1 307 aa11.53□□□□□ -0.56
HLA-DQA1-202ENST00000374949 SPECC1L-ADORA2AF8WAN1 911 aa11.53□□□□□ -0.56
HLA-DQA1-202ENST00000374949 CYB561D2O14569 222 aa11.53□□□□□ -0.56
HLA-DQA1-202ENST00000374949 MED7O43513 233 aa11.53□□□□□ -0.56
HLA-DQA1-202ENST00000374949 HUS1O60921 280 aa11.53□□□□□ -0.56
HLA-DQA1-202ENST00000374949 LRP3O75074 770 aa11.53□□□□□ -0.56
HLA-DQA1-202ENST00000374949 TACC1O75410 805 aa11.53□□□□□ -0.56
HLA-DQA1-202ENST00000374949 SOAT2O75908 522 aa11.53□□□□□ -0.56
HLA-DQA1-202ENST00000374949 ABL1P00519 1130 aa11.53□□□□□ -0.56
HLA-DQA1-202ENST00000374949 CALCAP01258 141 aa11.53□□□□□ -0.56
HLA-DQA1-202ENST00000374949 FTLP02792 175 aaPredicted RBP11.53□□□□□ -0.56
HLA-DQA1-202ENST00000374949 VDRP11473 427 aa11.53□□□□□ -0.56
HLA-DQA1-202ENST00000374949 CTHP32929 405 aa11.53□□□□□ -0.56
HLA-DQA1-202ENST00000374949 GNL1P36915 607 aaPredicted RBP11.53□□□□□ -0.56
HLA-DQA1-202ENST00000374949 NDST1P52848 882 aa11.53□□□□□ -0.56
HLA-DQA1-202ENST00000374949 RAD23BP54727 409 aa11.53□□□□□ -0.56
HLA-DQA1-202ENST00000374949 GNG11P61952 73 aa11.53□□□□□ -0.56
HLA-DQA1-202ENST00000374949 ETF1P62495 437 aaKnown RBP11.53□□□□□ -0.56
HLA-DQA1-202ENST00000374949 YWHAHQ04917 246 aaPredicted RBP11.53□□□□□ -0.56
HLA-DQA1-202ENST00000374949 FCHO2Q0JRZ9 810 aa11.53□□□□□ -0.56
HLA-DQA1-202ENST00000374949 CSRP2Q16527 193 aa11.53□□□□□ -0.56
HLA-DQA1-202ENST00000374949 CLEC16AQ2KHT3 1053 aa11.53□□□□□ -0.56
HLA-DQA1-202ENST00000374949 SOWAHAQ2M3V2 549 aa11.53□□□□□ -0.56
HLA-DQA1-202ENST00000374949 ACAD10Q6JQN1 1059 aa11.53□□□□□ -0.56
HLA-DQA1-202ENST00000374949 PPP1R2P3Q6NXS1 205 aa11.53□□□□□ -0.56
HLA-DQA1-202ENST00000374949 LIMS2Q7Z4I7 341 aa11.53□□□□□ -0.56
HLA-DQA1-202ENST00000374949 UNC93AQ86WB7 457 aa11.53□□□□□ -0.56
HLA-DQA1-202ENST00000374949 RNF10Q8N5U6 811 aaKnown RBP11.53□□□□□ -0.56
HLA-DQA1-202ENST00000374949 TTC9BQ8N6N2 239 aa11.53□□□□□ -0.56
HLA-DQA1-202ENST00000374949 TOP6BLQ8N6T0 577 aa11.53□□□□□ -0.56
HLA-DQA1-202ENST00000374949 SLC4A11Q8NBS3 891 aa11.53□□□□□ -0.56
HLA-DQA1-202ENST00000374949 WHAMMQ8TF30 809 aa11.53□□□□□ -0.56
HLA-DQA1-202ENST00000374949 HEXIM2Q96MH2 286 aaKnown RBP11.53□□□□□ -0.56
HLA-DQA1-202ENST00000374949 NT5C1AQ9BXI3 368 aa11.53□□□□□ -0.56
HLA-DQA1-202ENST00000374949 ISCUQ9H1K1 167 aa11.53□□□□□ -0.56
HLA-DQA1-202ENST00000374949 SNX25Q9H3E2 840 aa11.53□□□□□ -0.56
HLA-DQA1-202ENST00000374949 MYO1AQ9UBC5 1043 aa11.53□□□□□ -0.56
HLA-DQA1-202ENST00000374949 TFR2Q9UP52 801 aa11.53□□□□□ -0.56
HLA-DQA1-202ENST00000374949 ANKRD62A6NC57 917 aa11.52□□□□□ -0.57
HLA-DQA1-202ENST00000374949 M0QZQ0 153 aa11.52□□□□□ -0.57
HLA-DQA1-202ENST00000374949 CHADO15335 359 aa11.52□□□□□ -0.57
HLA-DQA1-202ENST00000374949 PRAMEF12O95522 483 aa11.52□□□□□ -0.57
HLA-DQA1-202ENST00000374949 TMEM253P0C7T8 217 aa11.52□□□□□ -0.57
HLA-DQA1-202ENST00000374949 CDR1P51861 262 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms