RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 TM7SF2O76062 418 aa11.53□□□□□ -0.56
CCDC40-203ENST00000374877 SCARA5Q6ZMJ2 495 aa11.53□□□□□ -0.56
CCDC40-203ENST00000374877 HSPH1Q92598 858 aa11.53□□□□□ -0.56
CCDC40-203ENST00000374877 ATP6V0A1Q93050 837 aa11.53□□□□□ -0.56
CCDC40-203ENST00000374877 TMEM143Q96AN5 459 aa11.53□□□□□ -0.56
CCDC40-203ENST00000374877 E2F7Q96AV8 911 aa11.53□□□□□ -0.56
CCDC40-203ENST00000374877 PTPN18Q99952 460 aa11.53□□□□□ -0.56
CCDC40-203ENST00000374877 TARS2Q9BW92 718 aaKnown RBP11.53□□□□□ -0.56
CCDC40-203ENST00000374877 CNTN3Q9P232 1028 aa11.53□□□□□ -0.56
CCDC40-203ENST00000374877 TAGLN3Q9UI15 199 aa11.53□□□□□ -0.56
CCDC40-203ENST00000374877 TELO2Q9Y4R8 837 aa11.53□□□□□ -0.56
CCDC40-203ENST00000374877 SOWAHBA6NEL2 793 aa11.52□□□□□ -0.56
CCDC40-203ENST00000374877 C3orf70A6NLC5 250 aaPredicted RBP11.52□□□□□ -0.56
CCDC40-203ENST00000374877 SPATA31C2B4DYI2 1134 aa11.52□□□□□ -0.56
CCDC40-203ENST00000374877 PEX10O60683 326 aa11.52□□□□□ -0.56
CCDC40-203ENST00000374877 CDC16Q13042 620 aa11.52□□□□□ -0.56
CCDC40-203ENST00000374877 BMPR2Q13873 1038 aa11.52□□□□□ -0.56
CCDC40-203ENST00000374877 DPYSL3Q14195 570 aa11.52□□□□□ -0.56
CCDC40-203ENST00000374877 FAM110CQ1W6H9 321 aa11.52□□□□□ -0.56
CCDC40-203ENST00000374877 BBS12Q6ZW61 710 aa11.52□□□□□ -0.56
CCDC40-203ENST00000374877 EMC1Q8N766 993 aa11.52□□□□□ -0.56
CCDC40-203ENST00000374877 KCTD6Q8NC69 237 aa11.52□□□□□ -0.56
CCDC40-203ENST00000374877 HAPLN2Q9GZV7 340 aa11.52□□□□□ -0.56
CCDC40-203ENST00000374877 LCTP09848 1927 aa11.52□□□□□ -0.56
CCDC40-203ENST00000374877 ADGRA2Q96PE1 1338 aa11.52□□□□□ -0.57
CCDC40-203ENST00000374877 UTRNP46939 3433 aa11.52□□□□□ -0.57
CCDC40-203ENST00000374877 CAPN14A8MX76 684 aa11.52□□□□□ -0.57
CCDC40-203ENST00000374877 PRR5-ARHGAP8B1AHC4 643 aa11.52□□□□□ -0.57
CCDC40-203ENST00000374877 RTP1P59025 263 aa11.52□□□□□ -0.57
CCDC40-203ENST00000374877 ACTR3P61158 418 aa11.52□□□□□ -0.57
CCDC40-203ENST00000374877 ARHGAP8P85298 464 aa11.52□□□□□ -0.57
CCDC40-203ENST00000374877 HADHQ16836 314 aaKnown RBP11.52□□□□□ -0.57
CCDC40-203ENST00000374877 DNAL1Q4LDG9 190 aa11.52□□□□□ -0.57
CCDC40-203ENST00000374877 ATG16L1Q676U5 607 aa11.52□□□□□ -0.57
CCDC40-203ENST00000374877 NUDCD3Q8IVD9 361 aa11.52□□□□□ -0.57
CCDC40-203ENST00000374877 JOSD2Q8TAC2 188 aa11.52□□□□□ -0.57
CCDC40-203ENST00000374877 SPATA18Q8TC71 538 aa11.52□□□□□ -0.57
CCDC40-203ENST00000374877 SMYD3Q9H7B4 428 aa11.52□□□□□ -0.57
CCDC40-203ENST00000374877 TJP2Q9UDY2 1190 aa11.52□□□□□ -0.57
CCDC40-203ENST00000374877 POLIQ9UNA4 740 aa11.52□□□□□ -0.57
CCDC40-203ENST00000374877 TCRBV5S1A1TA0A578 114 aa11.52□□□□□ -0.57
CCDC40-203ENST00000374877 STRNO43815 780 aa11.52□□□□□ -0.57
CCDC40-203ENST00000374877 OPHN1O60890 802 aa11.52□□□□□ -0.57
CCDC40-203ENST00000374877 LRCH4O75427 683 aa11.52□□□□□ -0.57
CCDC40-203ENST00000374877 KRT7P08729 469 aa11.52□□□□□ -0.57
CCDC40-203ENST00000374877 KRT3P12035 628 aa11.52□□□□□ -0.57
CCDC40-203ENST00000374877 KDELR1P24390 212 aa11.52□□□□□ -0.57
CCDC40-203ENST00000374877 IRX4P78413 519 aa11.52□□□□□ -0.57
CCDC40-203ENST00000374877 CNTN2Q02246 1040 aa11.52□□□□□ -0.57
CCDC40-203ENST00000374877 DYNC1I2Q13409 638 aaKnown RBP11.52□□□□□ -0.57
CCDC40-203ENST00000374877 UBAP2LQ14157 1087 aaKnown RBP11.52□□□□□ -0.57
CCDC40-203ENST00000374877 PDCD2Q16342 344 aaPredicted RBP11.52□□□□□ -0.57
CCDC40-203ENST00000374877 CNPY1Q3B7I2 92 aa11.52□□□□□ -0.57
CCDC40-203ENST00000374877 HSF5Q4G112 596 aaPredicted RBP11.52□□□□□ -0.57
CCDC40-203ENST00000374877 DARS2Q6PI48 645 aaKnown RBP11.52□□□□□ -0.57
CCDC40-203ENST00000374877 FAF2Q96CS3 445 aa11.52□□□□□ -0.57
CCDC40-203ENST00000374877 KRT37O76014 449 aa11.51□□□□□ -0.57
CCDC40-203ENST00000374877 RGS20O76081 388 aa11.51□□□□□ -0.57
CCDC40-203ENST00000374877 CST3P01034 146 aaPredicted RBP11.51□□□□□ -0.57
CCDC40-203ENST00000374877 ETS2P15036 469 aa11.51□□□□□ -0.57
CCDC40-203ENST00000374877 CD19P15391 556 aa11.51□□□□□ -0.57
CCDC40-203ENST00000374877 PRKCEQ02156 737 aa11.51□□□□□ -0.57
CCDC40-203ENST00000374877 SLC25A11Q02978 314 aaKnown RBP11.51□□□□□ -0.57
CCDC40-203ENST00000374877 TAP1Q03518 808 aa11.51□□□□□ -0.57
CCDC40-203ENST00000374877 TAF5Q15542 800 aa11.51□□□□□ -0.57
CCDC40-203ENST00000374877 TTC39BQ5VTQ0 682 aaPredicted RBP11.51□□□□□ -0.57
CCDC40-203ENST00000374877 ZCCHC23Q6ZST2 131 aa11.51□□□□□ -0.57
CCDC40-203ENST00000374877 SH2D5Q6ZV89 423 aa11.51□□□□□ -0.57
CCDC40-203ENST00000374877 SLC26A11Q86WA9 606 aa11.51□□□□□ -0.57
CCDC40-203ENST00000374877 MYLK4Q86YV6 388 aaPredicted RBP11.51□□□□□ -0.57
CCDC40-203ENST00000374877 CRLF3Q8IUI8 442 aa11.51□□□□□ -0.57
CCDC40-203ENST00000374877 GSTCDQ8NEC7 633 aa11.51□□□□□ -0.57
CCDC40-203ENST00000374877 CGRRF1Q99675 332 aa11.51□□□□□ -0.57
CCDC40-203ENST00000374877 EPAS1Q99814 870 aa11.51□□□□□ -0.57
CCDC40-203ENST00000374877 CYP26B1Q9NR63 512 aa11.51□□□□□ -0.57
CCDC40-203ENST00000374877 CNTN6Q9UQ52 1028 aa11.51□□□□□ -0.57
CCDC40-203ENST00000374877 K7ERI5 159 aa11.51□□□□□ -0.57
CCDC40-203ENST00000374877 RNASEH1O60930 286 aaKnown RBP11.51□□□□□ -0.57
CCDC40-203ENST00000374877 KCNA2P16389 499 aa11.51□□□□□ -0.57
CCDC40-203ENST00000374877 ENPEPQ07075 957 aa11.51□□□□□ -0.57
CCDC40-203ENST00000374877 FAXCQ5TGI0 409 aa11.51□□□□□ -0.57
CCDC40-203ENST00000374877 NPNTQ6UXI9 565 aa11.51□□□□□ -0.57
CCDC40-203ENST00000374877 RAPH1Q70E73 1250 aa11.51□□□□□ -0.57
CCDC40-203ENST00000374877 POLNQ7Z5Q5 900 aa11.51□□□□□ -0.57
CCDC40-203ENST00000374877 RASSF3Q86WH2 238 aa11.51□□□□□ -0.57
CCDC40-203ENST00000374877 TRIM42Q8IWZ5 723 aa11.51□□□□□ -0.57
CCDC40-203ENST00000374877 DEPTORQ8TB45 409 aa11.51□□□□□ -0.57
CCDC40-203ENST00000374877 SHKBP1Q8TBC3 707 aa11.51□□□□□ -0.57
CCDC40-203ENST00000374877 PYDC1Q8WXC3 89 aa11.51□□□□□ -0.57
CCDC40-203ENST00000374877 CENPKQ9BS16 269 aa11.51□□□□□ -0.57
CCDC40-203ENST00000374877 EBF3Q9H4W6 596 aa11.51□□□□□ -0.57
CCDC40-203ENST00000374877 CISHQ9NSE2 258 aa11.51□□□□□ -0.57
CCDC40-203ENST00000374877 DDX43Q9NXZ2 648 aaKnown RBP11.51□□□□□ -0.57
CCDC40-203ENST00000374877 PLA2G4CQ9UP65 541 aa11.51□□□□□ -0.57
CCDC40-203ENST00000374877 H0YCG3 227 aa11.51□□□□□ -0.57
CCDC40-203ENST00000374877 KLF11O14901 512 aa11.51□□□□□ -0.57
CCDC40-203ENST00000374877 LSM8O95777 96 aaKnown RBP11.51□□□□□ -0.57
CCDC40-203ENST00000374877 SNRPAP09012 282 aaKnown RBP11.51□□□□□ -0.57
CCDC40-203ENST00000374877 YY1P25490 414 aa11.51□□□□□ -0.57
CCDC40-203ENST00000374877 FSTL1Q12841 308 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms