RNA–Protein interactions for RNA: ENST00000373888.8

SMPDL3B-201, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMPDL3B, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-201ENST00000373888 MAGED2Q9UNF1 606 aaPredicted RBP15.33■□□□□ 0.04
SMPDL3B-201ENST00000373888 GRID2IPA4D2P6 1211 aa15.32■□□□□ 0.04
SMPDL3B-201ENST00000373888 DPYSL4O14531 572 aa15.32■□□□□ 0.04
SMPDL3B-201ENST00000373888 FANCGO15287 622 aa15.32■□□□□ 0.04
SMPDL3B-201ENST00000373888 BUB1BO60566 1050 aaPredicted RBP15.32■□□□□ 0.04
SMPDL3B-201ENST00000373888 PAPLNO95428 1278 aa15.32■□□□□ 0.04
SMPDL3B-201ENST00000373888 FYNP06241 537 aa15.32■□□□□ 0.04
SMPDL3B-201ENST00000373888 ZDHHC11BP0C7U3 371 aa15.32■□□□□ 0.04
SMPDL3B-201ENST00000373888 POU3F3P20264 500 aaPredicted RBP15.32■□□□□ 0.04
SMPDL3B-201ENST00000373888 GPD1P21695 349 aa15.32■□□□□ 0.04
SMPDL3B-201ENST00000373888 MATKP42679 507 aa15.32■□□□□ 0.04
SMPDL3B-201ENST00000373888 PSEN1P49768 467 aa15.32■□□□□ 0.04
SMPDL3B-201ENST00000373888 ZNF143P52747 638 aaPredicted RBP15.32■□□□□ 0.04
SMPDL3B-201ENST00000373888 YWHAGP61981 247 aaKnown RBP eCLIP15.32■□□□□ 0.04
SMPDL3B-201ENST00000373888 OGDHQ02218 1023 aa15.32■□□□□ 0.04
SMPDL3B-201ENST00000373888 ZNF252P-AS1Q0IIN9 211 aa15.32■□□□□ 0.04
SMPDL3B-201ENST00000373888 GRIN2CQ14957 1233 aa15.32■□□□□ 0.04
SMPDL3B-201ENST00000373888 TAF12Q16514 161 aa15.32■□□□□ 0.04
SMPDL3B-201ENST00000373888 ZNF697Q5TEC3 545 aa15.32■□□□□ 0.04
SMPDL3B-201ENST00000373888 BSPRYQ5W0U4 402 aa15.32■□□□□ 0.04
SMPDL3B-201ENST00000373888 SLFN11Q7Z7L1 901 aa15.32■□□□□ 0.04
SMPDL3B-201ENST00000373888 ELMOD1Q8N336 334 aa15.32■□□□□ 0.04
SMPDL3B-201ENST00000373888 NIPA2Q8N8Q9 360 aa15.32■□□□□ 0.04
SMPDL3B-201ENST00000373888 PDZD8Q8NEN9 1154 aa15.32■□□□□ 0.04
SMPDL3B-201ENST00000373888 RXFP2Q8WXD0 754 aa15.32■□□□□ 0.04
SMPDL3B-201ENST00000373888 ANKRD7Q92527 254 aa15.32■□□□□ 0.04
SMPDL3B-201ENST00000373888 BTBD6Q96KE9 485 aa15.32■□□□□ 0.04
SMPDL3B-201ENST00000373888 ALS2CR12Q96Q35 445 aa15.32■□□□□ 0.04
SMPDL3B-201ENST00000373888 DDX23Q9BUQ8 820 aaKnown RBP15.32■□□□□ 0.04
SMPDL3B-201ENST00000373888 ABCC13Q9NSE7 274 aa15.32■□□□□ 0.04
SMPDL3B-201ENST00000373888 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.32■□□□□ 0.04
SMPDL3B-201ENST00000373888 GMIPQ9P107 970 aa15.32■□□□□ 0.04
SMPDL3B-201ENST00000373888 UXTQ9UBK9 157 aaPredicted RBP15.32■□□□□ 0.04
SMPDL3B-201ENST00000373888 IP6K2Q9UHH9 426 aa15.32■□□□□ 0.04
SMPDL3B-201ENST00000373888 MYO16Q9Y6X6 1858 aa15.32■□□□□ 0.04
SMPDL3B-201ENST00000373888 A0A1W2PQH9 124 aa15.31■□□□□ 0.04
SMPDL3B-201ENST00000373888 RFPL2O75678 378 aa15.31■□□□□ 0.04
SMPDL3B-201ENST00000373888 PALMO75781 387 aa15.31■□□□□ 0.04
SMPDL3B-201ENST00000373888 PROSCO94903 275 aa15.31■□□□□ 0.04
SMPDL3B-201ENST00000373888 PDGFRAP16234 1089 aa15.31■□□□□ 0.04
SMPDL3B-201ENST00000373888 MAN1A1P33908 653 aa15.31■□□□□ 0.04
SMPDL3B-201ENST00000373888 NOS2P35228 1153 aa15.31■□□□□ 0.04
SMPDL3B-201ENST00000373888 PTPN9P43378 593 aa15.31■□□□□ 0.04
SMPDL3B-201ENST00000373888 PGFP49763 221 aa15.31■□□□□ 0.04
SMPDL3B-201ENST00000373888 PIGHQ14442 188 aaPredicted RBP15.31■□□□□ 0.04
SMPDL3B-201ENST00000373888 WHAMMP3Q1A5X7 153 aa15.31■□□□□ 0.04
SMPDL3B-201ENST00000373888 TCEAL5Q5H9L2 206 aa15.31■□□□□ 0.04
SMPDL3B-201ENST00000373888 SNX30Q5VWJ9 437 aa15.31■□□□□ 0.04
SMPDL3B-201ENST00000373888 TMEM184AQ6ZMB5 413 aa15.31■□□□□ 0.04
SMPDL3B-201ENST00000373888 SYCE1Q8N0S2 351 aa15.31■□□□□ 0.04
SMPDL3B-201ENST00000373888 DEFB106AQ8N104 65 aa15.31■□□□□ 0.04
SMPDL3B-201ENST00000373888 VN1R2Q8NFZ6 395 aa15.31■□□□□ 0.04
SMPDL3B-201ENST00000373888 ZNF512Q96ME7 567 aaPredicted RBP15.31■□□□□ 0.04
SMPDL3B-201ENST00000373888 NMUR1Q9HB89 426 aa15.31■□□□□ 0.04
SMPDL3B-201ENST00000373888 TLR8Q9NR97 1041 aaKnown RBP15.31■□□□□ 0.04
SMPDL3B-201ENST00000373888 CLIC5Q9NZA1 410 aa15.31■□□□□ 0.04
SMPDL3B-201ENST00000373888 ZNF638Q14966 1978 aaKnown RBP15.3■□□□□ 0.04
SMPDL3B-201ENST00000373888 CCL16O15467 120 aa15.3■□□□□ 0.04
SMPDL3B-201ENST00000373888 NCAM1P13591 858 aa15.3■□□□□ 0.04
SMPDL3B-201ENST00000373888 PSMA2P25787 234 aa15.3■□□□□ 0.04
SMPDL3B-201ENST00000373888 SDC4P31431 198 aa15.3■□□□□ 0.04
SMPDL3B-201ENST00000373888 PPP3CCP48454 512 aa15.3■□□□□ 0.04
SMPDL3B-201ENST00000373888 HYAL1Q12794 435 aa15.3■□□□□ 0.04
SMPDL3B-201ENST00000373888 MESDQ14696 234 aa15.3■□□□□ 0.04
SMPDL3B-201ENST00000373888 ACAP1Q15027 740 aa15.3■□□□□ 0.04
SMPDL3B-201ENST00000373888 CCDC14Q49A88 953 aa15.3■□□□□ 0.04
SMPDL3B-201ENST00000373888 BTBD8Q5XKL5 378 aa15.3■□□□□ 0.04
SMPDL3B-201ENST00000373888 DAAM2Q86T65 1068 aa15.3■□□□□ 0.04
SMPDL3B-201ENST00000373888 TMC8Q8IU68 726 aa15.3■□□□□ 0.04
SMPDL3B-201ENST00000373888 EFHBQ8N7U6 833 aa15.3■□□□□ 0.04
SMPDL3B-201ENST00000373888 UBXN4Q92575 508 aa15.3■□□□□ 0.04
SMPDL3B-201ENST00000373888 CASP10Q92851 521 aa15.3■□□□□ 0.04
SMPDL3B-201ENST00000373888 NT5C3BQ969T7 300 aa15.3■□□□□ 0.04
SMPDL3B-201ENST00000373888 LRCH3Q96II8 777 aa15.3■□□□□ 0.04
SMPDL3B-201ENST00000373888 CFAP57Q96MR6 1250 aa15.3■□□□□ 0.04
SMPDL3B-201ENST00000373888 CNPY3Q9BT09 278 aa15.3■□□□□ 0.04
SMPDL3B-201ENST00000373888 LRRC3Q9BY71 257 aa15.3■□□□□ 0.04
SMPDL3B-201ENST00000373888 DZANK1Q9NVP4 752 aa15.3■□□□□ 0.04
SMPDL3B-201ENST00000373888 OSER1Q9NX31 292 aa15.3■□□□□ 0.04
SMPDL3B-201ENST00000373888 RRN3Q9NYV6 651 aa15.3■□□□□ 0.04
SMPDL3B-201ENST00000373888 NAALADL1Q9UQQ1 740 aa15.3■□□□□ 0.04
SMPDL3B-201ENST00000373888 MTCH2Q9Y6C9 303 aa15.3■□□□□ 0.04
SMPDL3B-201ENST00000373888 CAPN9O14815 690 aa15.29■□□□□ 0.04
SMPDL3B-201ENST00000373888 XYLBO75191 536 aa15.29■□□□□ 0.04
SMPDL3B-201ENST00000373888 TADA3O75528 432 aa15.29■□□□□ 0.04
SMPDL3B-201ENST00000373888 SLC1A1P43005 524 aa15.29■□□□□ 0.04
SMPDL3B-201ENST00000373888 SLC25A52Q3SY17 297 aa15.29■□□□□ 0.04
SMPDL3B-201ENST00000373888 DCAF6Q58WW2 860 aa15.29■□□□□ 0.04
SMPDL3B-201ENST00000373888 SYPL2Q5VXT5 272 aa15.29■□□□□ 0.04
SMPDL3B-201ENST00000373888 BNIPLQ7Z465 357 aa15.29■□□□□ 0.04
SMPDL3B-201ENST00000373888 ZNF276Q8N554 614 aa15.29■□□□□ 0.04
SMPDL3B-201ENST00000373888 CMASQ8NFW8 434 aaPredicted RBP15.29■□□□□ 0.04
SMPDL3B-201ENST00000373888 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.29■□□□□ 0.04
SMPDL3B-201ENST00000373888 EDEM1Q92611 657 aa15.29■□□□□ 0.04
SMPDL3B-201ENST00000373888 CENPIQ92674 756 aaPredicted RBP15.29■□□□□ 0.04
SMPDL3B-201ENST00000373888 NPY6RQ99463 290 aa15.29■□□□□ 0.04
SMPDL3B-201ENST00000373888 CARD6Q9BX69 1037 aa15.29■□□□□ 0.04
SMPDL3B-201ENST00000373888 PRKD2Q9BZL6 878 aa15.29■□□□□ 0.04
SMPDL3B-201ENST00000373888 IL21Q9HBE4 155 aa15.29■□□□□ 0.04
SMPDL3B-201ENST00000373888 ZNF334Q9HCZ1 680 aaPredicted RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms