RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 IFNEQ86WN2 208 aa17.98■□□□□ 0.47
PTPRU-202ENST00000373779 IARS2Q9NSE4 1012 aaKnown RBP17.98■□□□□ 0.47
PTPRU-202ENST00000373779 GGA3Q9NZ52 723 aa17.98■□□□□ 0.47
PTPRU-202ENST00000373779 UBQLN1Q9UMX0 589 aaKnown RBP17.98■□□□□ 0.47
PTPRU-202ENST00000373779 UBIAD1Q9Y5Z9 338 aa17.98■□□□□ 0.47
PTPRU-202ENST00000373779 KCNA4P22459 653 aa17.97■□□□□ 0.47
PTPRU-202ENST00000373779 BCAT1P54687 386 aa17.97■□□□□ 0.47
PTPRU-202ENST00000373779 NOMO3P69849 1222 aa17.97■□□□□ 0.47
PTPRU-202ENST00000373779 PLOD1Q02809 727 aaPredicted RBP17.97■□□□□ 0.47
PTPRU-202ENST00000373779 CAPRIN1Q14444 709 aaKnown RBP17.97■□□□□ 0.47
PTPRU-202ENST00000373779 FAM83EQ2M2I3 478 aa17.97■□□□□ 0.47
PTPRU-202ENST00000373779 TDRD10Q5VZ19 366 aaKnown RBP17.97■□□□□ 0.47
PTPRU-202ENST00000373779 TMEM109Q9BVC6 243 aa17.97■□□□□ 0.47
PTPRU-202ENST00000373779 TSPAN16Q9UKR8 245 aa17.97■□□□□ 0.47
PTPRU-202ENST00000373779 FAM200BP0CF97 657 aa17.97■□□□□ 0.47
PTPRU-202ENST00000373779 CLK2P49760 499 aaKnown RBP17.97■□□□□ 0.47
PTPRU-202ENST00000373779 MRIQ9BWK5 157 aa17.97■□□□□ 0.47
PTPRU-202ENST00000373779 BARX2Q9UMQ3 279 aaPredicted RBP17.97■□□□□ 0.47
PTPRU-202ENST00000373779 MAP4P27816 1152 aaKnown RBP17.97■□□□□ 0.47
PTPRU-202ENST00000373779 RIPK1Q13546 671 aa17.97■□□□□ 0.47
PTPRU-202ENST00000373779 FAM131BQ86XD5 332 aa17.97■□□□□ 0.47
PTPRU-202ENST00000373779 FHDC1Q9C0D6 1143 aaPredicted RBP17.97■□□□□ 0.47
PTPRU-202ENST00000373779 ADNPQ9H2P0 1102 aa17.97■□□□□ 0.47
PTPRU-202ENST00000373779 GID8Q9NWU2 228 aa17.97■□□□□ 0.47
PTPRU-202ENST00000373779 BANF1O75531 89 aa17.97■□□□□ 0.47
PTPRU-202ENST00000373779 SNUPNO95149 360 aaKnown RBP17.97■□□□□ 0.47
PTPRU-202ENST00000373779 GLRA4Q5JXX5 417 aa17.97■□□□□ 0.47
PTPRU-202ENST00000373779 TTC27Q6P3X3 843 aa17.97■□□□□ 0.47
PTPRU-202ENST00000373779 PALB2Q86YC2 1186 aa17.97■□□□□ 0.47
PTPRU-202ENST00000373779 RMDN1Q96DB5 314 aa17.97■□□□□ 0.47
PTPRU-202ENST00000373779 CATSPERBQ9H7T0 1116 aa17.97■□□□□ 0.47
PTPRU-202ENST00000373779 IL1RL2Q9HB29 575 aa17.97■□□□□ 0.47
PTPRU-202ENST00000373779 TCRBV7S2A1N4TA0A589 114 aa17.96■□□□□ 0.47
PTPRU-202ENST00000373779 WDR27A2RRH5 827 aa17.96■□□□□ 0.47
PTPRU-202ENST00000373779 ENTPD5O75356 428 aa17.96■□□□□ 0.47
PTPRU-202ENST00000373779 PEX5P50542 639 aa17.96■□□□□ 0.47
PTPRU-202ENST00000373779 CACNB2Q08289 660 aaPredicted RBP17.96■□□□□ 0.47
PTPRU-202ENST00000373779 LAMC2Q13753 1193 aa17.96■□□□□ 0.47
PTPRU-202ENST00000373779 STKLD1Q8NE28 680 aa17.96■□□□□ 0.47
PTPRU-202ENST00000373779 GDPD5Q8WTR4 605 aa17.96■□□□□ 0.47
PTPRU-202ENST00000373779 CPB2Q96IY4 423 aa17.96■□□□□ 0.47
PTPRU-202ENST00000373779 EGFL8Q99944 293 aa17.96■□□□□ 0.47
PTPRU-202ENST00000373779 PARP4Q9UKK3 1724 aaKnown RBP17.96■□□□□ 0.47
PTPRU-202ENST00000373779 ANXA9O76027 345 aa17.96■□□□□ 0.47
PTPRU-202ENST00000373779 GLRBP48167 497 aa17.96■□□□□ 0.47
PTPRU-202ENST00000373779 ITGA9Q13797 1035 aa17.96■□□□□ 0.47
PTPRU-202ENST00000373779 ZNF484Q5JVG2 852 aa17.96■□□□□ 0.47
PTPRU-202ENST00000373779 ZCCHC23Q6ZST2 131 aa17.96■□□□□ 0.47
PTPRU-202ENST00000373779 SUPT3HO75486 399 aa17.96■□□□□ 0.47
PTPRU-202ENST00000373779 WFS1O76024 890 aa17.96■□□□□ 0.47
PTPRU-202ENST00000373779 GLRA2P23416 452 aa17.96■□□□□ 0.47
PTPRU-202ENST00000373779 RPL22P35268 128 aaKnown RBP17.96■□□□□ 0.47
PTPRU-202ENST00000373779 GRIK1P39086 918 aa17.96■□□□□ 0.47
PTPRU-202ENST00000373779 CNDP1Q96KN2 507 aa17.96■□□□□ 0.47
PTPRU-202ENST00000373779 DUOX1Q9NRD9 1551 aa17.96■□□□□ 0.47
PTPRU-202ENST00000373779 SLCO1B7G3V0H7 640 aa17.96■□□□□ 0.47
PTPRU-202ENST00000373779 EDF1O60869 148 aaKnown RBP17.96■□□□□ 0.47
PTPRU-202ENST00000373779 CLPTM1O96005 669 aa17.96■□□□□ 0.47
PTPRU-202ENST00000373779 PSMC3P17980 439 aa17.96■□□□□ 0.47
PTPRU-202ENST00000373779 ADRM1Q16186 407 aa17.96■□□□□ 0.47
PTPRU-202ENST00000373779 POU5F2Q8N7G0 328 aa17.96■□□□□ 0.47
PTPRU-202ENST00000373779 DNERQ8NFT8 737 aa17.96■□□□□ 0.47
PTPRU-202ENST00000373779 PABPC5Q96DU9 382 aaKnown RBP17.96■□□□□ 0.47
PTPRU-202ENST00000373779 FAR2Q96K12 515 aa17.96■□□□□ 0.47
PTPRU-202ENST00000373779 RMDN2Q96LZ7 410 aa17.96■□□□□ 0.47
PTPRU-202ENST00000373779 SPON2Q9BUD6 331 aa17.96■□□□□ 0.47
PTPRU-202ENST00000373779 hCG_1818297A0A087WSY0 165 aa17.96■□□□□ 0.46
PTPRU-202ENST00000373779 SIGLEC16A6NMB1 481 aa17.96■□□□□ 0.46
PTPRU-202ENST00000373779 CHADO15335 359 aa17.96■□□□□ 0.46
PTPRU-202ENST00000373779 TSHRP16473 764 aa17.96■□□□□ 0.46
PTPRU-202ENST00000373779 XPAP23025 273 aaPredicted RBP17.96■□□□□ 0.46
PTPRU-202ENST00000373779 NDST1P52848 882 aa17.96■□□□□ 0.46
PTPRU-202ENST00000373779 PARP6Q2NL67 630 aa17.96■□□□□ 0.46
PTPRU-202ENST00000373779 METTL7BQ6UX53 244 aa17.96■□□□□ 0.46
PTPRU-202ENST00000373779 SPATA2LQ8IUW3 424 aaPredicted RBP17.96■□□□□ 0.46
PTPRU-202ENST00000373779 SEMA4DQ92854 862 aa17.96■□□□□ 0.46
PTPRU-202ENST00000373779 WNK4Q96J92 1243 aa17.96■□□□□ 0.46
PTPRU-202ENST00000373779 TBC1D23Q9NUY8 699 aa17.96■□□□□ 0.46
PTPRU-202ENST00000373779 DDIT4Q9NX09 232 aa17.96■□□□□ 0.46
PTPRU-202ENST00000373779 TSR3Q9UJK0 312 aaKnown RBP17.96■□□□□ 0.46
PTPRU-202ENST00000373779 FAM237BA0A1B0GVD1 139 aa17.95■□□□□ 0.46
PTPRU-202ENST00000373779 ITGB5P18084 799 aa17.95■□□□□ 0.46
PTPRU-202ENST00000373779 ATP4AP20648 1035 aa17.95■□□□□ 0.46
PTPRU-202ENST00000373779 CDH8P55286 799 aa17.95■□□□□ 0.46
PTPRU-202ENST00000373779 CCDC153Q494R4 210 aa17.95■□□□□ 0.46
PTPRU-202ENST00000373779 KIAA1841Q6NSI8 718 aa17.95■□□□□ 0.46
PTPRU-202ENST00000373779 TAS2R42Q7RTR8 314 aa17.95■□□□□ 0.46
PTPRU-202ENST00000373779 TCF7L2Q9NQB0 619 aa17.95■□□□□ 0.46
PTPRU-202ENST00000373779 ZBTB7AO95365 584 aa17.95■□□□□ 0.46
PTPRU-202ENST00000373779 CCDC15Q0P6D6 951 aa17.95■□□□□ 0.46
PTPRU-202ENST00000373779 MPP3Q13368 585 aa17.95■□□□□ 0.46
PTPRU-202ENST00000373779 SHISA4Q96DD7 197 aa17.95■□□□□ 0.46
PTPRU-202ENST00000373779 CEP19Q96LK0 163 aa17.95■□□□□ 0.46
PTPRU-202ENST00000373779 A1CFQ9NQ94 594 aaKnown RBP17.95■□□□□ 0.46
PTPRU-202ENST00000373779 ITGA11Q9UKX5 1188 aa17.95■□□□□ 0.46
PTPRU-202ENST00000373779 PPME1Q9Y570 386 aa17.95■□□□□ 0.46
PTPRU-202ENST00000373779 MED1Q15648 1581 aaPredicted RBP17.95■□□□□ 0.46
PTPRU-202ENST00000373779 TCHHL1Q5QJ38 904 aaPredicted RBP17.95■□□□□ 0.46
PTPRU-202ENST00000373779 UNC45BQ8IWX7 931 aa17.95■□□□□ 0.46
PTPRU-202ENST00000373779 LRRC39Q96DD0 335 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms