RNA–Protein interactions for RNA: ENST00000373492.6

PBX3-205, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-205ENST00000373492 TRIM72Q6ZMU5 477 aa19.25■□□□□ 0.67
PBX3-205ENST00000373492 VSTM4Q8IW00 320 aa19.25■□□□□ 0.67
PBX3-205ENST00000373492 ARL14EPQ8N8R7 260 aaPredicted RBP19.25■□□□□ 0.67
PBX3-205ENST00000373492 MSANTD4Q8NCY6 345 aa19.25■□□□□ 0.67
PBX3-205ENST00000373492 BPIFB1Q8TDL5 484 aa19.25■□□□□ 0.67
PBX3-205ENST00000373492 IPO4Q8TEX9 1081 aaKnown RBP19.25■□□□□ 0.67
PBX3-205ENST00000373492 SLC20A1Q8WUM9 679 aa19.25■□□□□ 0.67
PBX3-205ENST00000373492 IRGQQ8WZA9 623 aa19.25■□□□□ 0.67
PBX3-205ENST00000373492 GOLGA1Q92805 767 aa19.25■□□□□ 0.67
PBX3-205ENST00000373492 PPP1R13BQ96KQ4 1090 aa19.25■□□□□ 0.67
PBX3-205ENST00000373492 LRRC3BQ96PB8 259 aa19.25■□□□□ 0.67
PBX3-205ENST00000373492 CDK5RAP1Q96SZ6 601 aaKnown RBP19.25■□□□□ 0.67
PBX3-205ENST00000373492 SLC4A5Q9BY07 1137 aa19.25■□□□□ 0.67
PBX3-205ENST00000373492 MIS12Q9H081 205 aa19.25■□□□□ 0.67
PBX3-205ENST00000373492 SYNCQ9H7C4 482 aa19.25■□□□□ 0.67
PBX3-205ENST00000373492 TBC1D17Q9HA65 648 aa19.25■□□□□ 0.67
PBX3-205ENST00000373492 TDP1Q9NUW8 608 aa19.25■□□□□ 0.67
PBX3-205ENST00000373492 CYTH4Q9UIA0 394 aa19.25■□□□□ 0.67
PBX3-205ENST00000373492 MIA3Q5JRA6 1907 aa19.25■□□□□ 0.67
PBX3-205ENST00000373492 ZNF318Q5VUA4 2279 aa19.25■□□□□ 0.67
PBX3-205ENST00000373492 MYOFQ9NZM1 2061 aa19.24■□□□□ 0.67
PBX3-205ENST00000373492 TLR5O60602 858 aa19.24■□□□□ 0.67
PBX3-205ENST00000373492 GYPCP04921 128 aa19.24■□□□□ 0.67
PBX3-205ENST00000373492 MBL2P11226 248 aaPredicted RBP19.24■□□□□ 0.67
PBX3-205ENST00000373492 AOC1P19801 751 aa19.24■□□□□ 0.67
PBX3-205ENST00000373492 CDH5P33151 784 aaPredicted RBP19.24■□□□□ 0.67
PBX3-205ENST00000373492 VCPP55072 806 aaKnown RBP19.24■□□□□ 0.67
PBX3-205ENST00000373492 DAOAP59103 153 aa19.24■□□□□ 0.67
PBX3-205ENST00000373492 FMO1Q01740 532 aa19.24■□□□□ 0.67
PBX3-205ENST00000373492 ARHGAP29Q52LW3 1261 aa19.24■□□□□ 0.67
PBX3-205ENST00000373492 BTBD8Q5XKL5 378 aa19.24■□□□□ 0.67
PBX3-205ENST00000373492 IRF2BP2Q7Z5L9 587 aa19.24■□□□□ 0.67
PBX3-205ENST00000373492 TMEM110Q86TL2 294 aa19.24■□□□□ 0.67
PBX3-205ENST00000373492 WDTC1Q8N5D0 677 aa19.24■□□□□ 0.67
PBX3-205ENST00000373492 USP13Q92995 863 aaPredicted RBP19.24■□□□□ 0.67
PBX3-205ENST00000373492 CYP2S1Q96SQ9 504 aa19.24■□□□□ 0.67
PBX3-205ENST00000373492 PRRX2Q99811 253 aa19.24■□□□□ 0.67
PBX3-205ENST00000373492 AGPAT1Q99943 283 aa19.24■□□□□ 0.67
PBX3-205ENST00000373492 SMG9Q9H0W8 520 aaKnown RBP19.24■□□□□ 0.67
PBX3-205ENST00000373492 SEPT11Q9NVA2 429 aaKnown RBP19.24■□□□□ 0.67
PBX3-205ENST00000373492 THG1LQ9NWX6 298 aaKnown RBP19.24■□□□□ 0.67
PBX3-205ENST00000373492 CLIC5Q9NZA1 410 aa19.24■□□□□ 0.67
PBX3-205ENST00000373492 E5RJQ4 531 aa19.23■□□□□ 0.67
PBX3-205ENST00000373492 ARNTLO00327 626 aa19.23■□□□□ 0.67
PBX3-205ENST00000373492 STK25O00506 426 aa19.23■□□□□ 0.67
PBX3-205ENST00000373492 AP5Z1O43299 807 aa19.23■□□□□ 0.67
PBX3-205ENST00000373492 RARGP13631 454 aa19.23■□□□□ 0.67
PBX3-205ENST00000373492 GLULP15104 373 aa19.23■□□□□ 0.67
PBX3-205ENST00000373492 CASP14P31944 242 aa19.23■□□□□ 0.67
PBX3-205ENST00000373492 ATP5C1P36542 298 aaKnown RBP19.23■□□□□ 0.67
PBX3-205ENST00000373492 MLLT6P55198 1093 aaPredicted RBP19.23■□□□□ 0.67
PBX3-205ENST00000373492 KLHL30Q0D2K2 578 aa19.23■□□□□ 0.67
PBX3-205ENST00000373492 IER5LQ5T953 404 aa19.23■□□□□ 0.67
PBX3-205ENST00000373492 SYN2Q92777 582 aaPredicted RBP19.23■□□□□ 0.67
PBX3-205ENST00000373492 SLC22A12Q96S37 553 aa19.23■□□□□ 0.67
PBX3-205ENST00000373492 CPXM1Q96SM3 734 aa19.23■□□□□ 0.67
PBX3-205ENST00000373492 DDX23Q9BUQ8 820 aaKnown RBP19.23■□□□□ 0.67
PBX3-205ENST00000373492 CCSER2Q9H7U1 834 aa19.23■□□□□ 0.67
PBX3-205ENST00000373492 NMUR1Q9HB89 426 aa19.23■□□□□ 0.67
PBX3-205ENST00000373492 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.23■□□□□ 0.67
PBX3-205ENST00000373492 COCHO43405 550 aa19.22■□□□□ 0.67
PBX3-205ENST00000373492 GABBR2O75899 941 aa19.22■□□□□ 0.67
PBX3-205ENST00000373492 OLFM2O95897 454 aa19.22■□□□□ 0.67
PBX3-205ENST00000373492 TCF3P15923 654 aa19.22■□□□□ 0.67
PBX3-205ENST00000373492 CHRNB2P17787 502 aa19.22■□□□□ 0.67
PBX3-205ENST00000373492 TNFAIP3P21580 790 aa19.22■□□□□ 0.67
PBX3-205ENST00000373492 NOMO3P69849 1222 aa19.22■□□□□ 0.67
PBX3-205ENST00000373492 SLC7A9P82251 487 aa19.22■□□□□ 0.67
PBX3-205ENST00000373492 RSRC2Q7L4I2 434 aaKnown RBP19.22■□□□□ 0.67
PBX3-205ENST00000373492 SCD5Q86SK9 330 aa19.22■□□□□ 0.67
PBX3-205ENST00000373492 ERICH1Q86X53 443 aa19.22■□□□□ 0.67
PBX3-205ENST00000373492 SCUBE3Q8IX30 993 aa19.22■□□□□ 0.67
PBX3-205ENST00000373492 ZNF276Q8N554 614 aa19.22■□□□□ 0.67
PBX3-205ENST00000373492 TMEM105Q8N8V8 129 aa19.22■□□□□ 0.67
PBX3-205ENST00000373492 CSGALNACT1Q8TDX6 532 aa19.22■□□□□ 0.67
PBX3-205ENST00000373492 TRIM62Q9BVG3 475 aa19.22■□□□□ 0.67
PBX3-205ENST00000373492 RNF38Q9H0F5 515 aa19.22■□□□□ 0.67
PBX3-205ENST00000373492 HEBP1Q9NRV9 189 aa19.22■□□□□ 0.67
PBX3-205ENST00000373492 ABCC13Q9NSE7 274 aa19.22■□□□□ 0.67
PBX3-205ENST00000373492 OLA1Q9NTK5 396 aaKnown RBP19.22■□□□□ 0.67
PBX3-205ENST00000373492 OSER1Q9NX31 292 aa19.22■□□□□ 0.67
PBX3-205ENST00000373492 ARHGAP26Q9UNA1 814 aa19.22■□□□□ 0.67
PBX3-205ENST00000373492 CCL26Q9Y258 94 aa19.22■□□□□ 0.67
PBX3-205ENST00000373492 BZW2Q9Y6E2 419 aaKnown RBP19.22■□□□□ 0.67
PBX3-205ENST00000373492 KANSL1LA0AUZ9 987 aa19.21■□□□□ 0.67
PBX3-205ENST00000373492 YJEFN3A6XGL0 299 aa19.21■□□□□ 0.67
PBX3-205ENST00000373492 E7ENQ6 273 aa19.21■□□□□ 0.67
PBX3-205ENST00000373492 MAN2B1O00754 1011 aa19.21■□□□□ 0.67
PBX3-205ENST00000373492 LTFP02788 710 aa19.21■□□□□ 0.67
PBX3-205ENST00000373492 CYP1A1P04798 512 aaPredicted RBP19.21■□□□□ 0.67
PBX3-205ENST00000373492 PRKCIP41743 596 aa19.21■□□□□ 0.67
PBX3-205ENST00000373492 PGFP49763 221 aa19.21■□□□□ 0.67
PBX3-205ENST00000373492 ZNF75DP51815 510 aa19.21■□□□□ 0.67
PBX3-205ENST00000373492 TSR1Q2NL82 804 aaKnown RBP19.21■□□□□ 0.67
PBX3-205ENST00000373492 PTPN20Q4JDL3 420 aa19.21■□□□□ 0.67
PBX3-205ENST00000373492 C10orf120Q5SQS8 335 aa19.21■□□□□ 0.67
PBX3-205ENST00000373492 NAA35Q5VZE5 725 aa19.21■□□□□ 0.67
PBX3-205ENST00000373492 BSPRYQ5W0U4 402 aa19.21■□□□□ 0.67
PBX3-205ENST00000373492 OR6B2Q6IFH4 312 aa19.21■□□□□ 0.67
PBX3-205ENST00000373492 KLHDC10Q6PID8 442 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms