RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 DMTF1Q9Y222 760 aa6.81□□□□□ -1.32
CHD6-203ENST00000373233 AK5Q9Y6K8 562 aa6.81□□□□□ -1.32
CHD6-203ENST00000373233 MUTP22033 750 aa6.81□□□□□ -1.32
CHD6-203ENST00000373233 PMLP29590 882 aa6.81□□□□□ -1.32
CHD6-203ENST00000373233 PTGER2P43116 358 aa6.81□□□□□ -1.32
CHD6-203ENST00000373233 YARSP54577 528 aaKnown RBP6.81□□□□□ -1.32
CHD6-203ENST00000373233 ANO4Q32M45 955 aa6.81□□□□□ -1.32
CHD6-203ENST00000373233 NIPA1Q7RTP0 329 aa6.81□□□□□ -1.32
CHD6-203ENST00000373233 TC2NQ8N9U0 490 aa6.81□□□□□ -1.32
CHD6-203ENST00000373233 MOV10Q9HCE1 1003 aaKnown RBP6.81□□□□□ -1.32
CHD6-203ENST00000373233 ZNF224Q9NZL3 707 aa6.81□□□□□ -1.32
CHD6-203ENST00000373233 NUP214P35658 2090 aaPredicted RBP6.8□□□□□ -1.32
CHD6-203ENST00000373233 FOXN3O00409 490 aaPredicted RBP6.8□□□□□ -1.32
CHD6-203ENST00000373233 GIT2Q14161 759 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 SLC25A41Q8N5S1 370 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 TMEM143Q96AN5 459 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 PNMA5Q96PV4 448 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 MARCH7Q9H992 704 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 CDV3Q9UKY7 258 aaKnown RBP6.8□□□□□ -1.32
CHD6-203ENST00000373233 SNX13Q9Y5W8 968 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 CENPXA8MT69 81 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 TRIM49D1C9J1S8 452 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 H7C0C1 242 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 BIRC5O15392 142 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 ZNF862O60290 1169 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 USP1O94782 785 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 TOMM70O94826 608 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 ZNF12P17014 697 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 MAPK4P31152 587 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 ATP5OP48047 213 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 ZFP69Q49AA0 526 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 AKIRIN2Q53H80 203 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 CDKAL1Q5VV42 579 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 TMEM237Q96Q45 408 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 TEX12Q9BXU0 123 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 IRX2Q9BZI1 471 aaPredicted RBP6.8□□□□□ -1.32
CHD6-203ENST00000373233 TAGLN3Q9UI15 199 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 L1RE1Q9UN81 338 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 ZNF233A6NK53 670 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 CDH16O75309 829 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 ACTR2P61160 394 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 TUBGCP5Q96RT8 1024 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 ASPSCR1Q9BZE9 553 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 SMARCAL1Q9NZC9 954 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 DBR1Q9UK59 544 aaKnown RBP6.8□□□□□ -1.32
CHD6-203ENST00000373233 DPPA5A6NC42 116 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 IFI30P13284 250 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 TNFRSF8P28908 595 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 XRCC4Q13426 336 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 DGUOKQ16854 277 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 PPP1R15BQ5SWA1 713 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 BNIPLQ7Z465 357 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 HAUS6Q7Z4H7 955 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 RFX6Q8HWS3 928 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 MKNK1Q9BUB5 465 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 MYLK2Q9H1R3 596 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 ANKEF1Q9NU02 776 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 GTSE1Q9NYZ3 720 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 BTBD3Q9Y2F9 522 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 TDRKHQ9Y2W6 561 aaKnown RBP6.8□□□□□ -1.32
CHD6-203ENST00000373233 RNF103O00237 685 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 DGAT1O75907 488 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 SRP72O76094 671 aaKnown RBP6.8□□□□□ -1.32
CHD6-203ENST00000373233 KLHL18O94889 574 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 KLHL2O95198 593 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 ALBP02768 609 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 TXNP10599 105 aaKnown RBP6.8□□□□□ -1.32
CHD6-203ENST00000373233 GCLMP48507 274 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 KLK7P49862 253 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 ATXN3P54252 364 aaPredicted RBP6.8□□□□□ -1.32
CHD6-203ENST00000373233 IYDQ6PHW0 289 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 KBTBD2Q8IY47 623 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.8□□□□□ -1.323e-9■■■■■ 348.1
CHD6-203ENST00000373233 HACE1Q8IYU2 909 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 C7orf43Q8WVR3 580 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 HAS1Q92839 578 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 SPRTNQ9H040 489 aaPredicted RBP6.8□□□□□ -1.32
CHD6-203ENST00000373233 CROTQ9UKG9 612 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 NRXN2Q9P2S2 1712 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 PI4K2BG5E9Z4 385 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 NFKBIEO00221 500 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 ZBTB39O15060 712 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 TRMUO75648 421 aaKnown RBP6.8□□□□□ -1.32
CHD6-203ENST00000373233 NADKO95544 446 aaPredicted RBP6.8□□□□□ -1.32
CHD6-203ENST00000373233 CHEK2O96017 543 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 CCR3P51677 355 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 VAMP7P51809 220 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 LGALS3BPQ08380 585 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 GSTA3Q16772 222 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 ZNF285Q96NJ3 590 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 WDR18Q9BV38 432 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 SEMA6BQ9H3T3 888 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 ZFYVE1Q9HBF4 777 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 DOLKQ9UPQ8 538 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 GOLGA8SH3BPF8 625 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 K7ERI5 159 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 SLC9A1P19634 815 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 DYNLT1P63172 113 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 LVRNQ6Q4G3 990 aa6.8□□□□□ -1.32
CHD6-203ENST00000373233 USP50Q70EL3 339 aaPredicted RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms