RNA–Protein interactions for RNA: ENST00000372736.3

COL9A2-201, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-201ENST00000372736 OTUB2Q96DC9 234 aa23.84■■□□□ 1.41
COL9A2-201ENST00000372736 CRACR2AQ9BSW2 395 aa23.84■■□□□ 1.41
COL9A2-201ENST00000372736 FAM126AQ9BYI3 521 aaPredicted RBP23.84■■□□□ 1.41
COL9A2-201ENST00000372736 CLIC5Q9NZA1 410 aa23.84■■□□□ 1.41
COL9A2-201ENST00000372736 DACH1Q9UI36 760 aa23.84■■□□□ 1.41
COL9A2-201ENST00000372736 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.84■■□□□ 1.41
COL9A2-201ENST00000372736 CNTN6Q9UQ52 1028 aa23.84■■□□□ 1.41
COL9A2-201ENST00000372736 GVINP1Q7Z2Y8 2422 aa23.83■■□□□ 1.41
COL9A2-201ENST00000372736 K7ESF4 209 aa23.83■■□□□ 1.41
COL9A2-201ENST00000372736 RNF40O75150 1001 aa23.83■■□□□ 1.41
COL9A2-201ENST00000372736 BRD2P25440 801 aaKnown RBP23.83■■□□□ 1.41
COL9A2-201ENST00000372736 TPD52L1Q16890 204 aaPredicted RBP23.83■■□□□ 1.41
COL9A2-201ENST00000372736 C10orf120Q5SQS8 335 aa23.83■■□□□ 1.41
COL9A2-201ENST00000372736 RBM43Q6ZSC3 357 aaKnown RBP23.83■■□□□ 1.41
COL9A2-201ENST00000372736 UBA3Q8TBC4 463 aa23.83■■□□□ 1.41
COL9A2-201ENST00000372736 ULBP1Q9BZM6 244 aa23.83■■□□□ 1.41
COL9A2-201ENST00000372736 DNMT3LQ9UJW3 386 aa23.83■■□□□ 1.41
COL9A2-201ENST00000372736 OTOGLQ3ZCN5 2332 aa23.82■■□□□ 1.4
COL9A2-201ENST00000372736 LILRB5O75023 590 aa23.82■■□□□ 1.4
COL9A2-201ENST00000372736 ZBED1O96006 694 aa23.82■■□□□ 1.4
COL9A2-201ENST00000372736 ADH1CP00326 375 aa23.82■■□□□ 1.4
COL9A2-201ENST00000372736 MTIF2P46199 727 aaKnown RBP23.82■■□□□ 1.4
COL9A2-201ENST00000372736 ADIGQ0VDE8 80 aa23.82■■□□□ 1.4
COL9A2-201ENST00000372736 PM20D1Q6GTS8 502 aa23.82■■□□□ 1.4
COL9A2-201ENST00000372736 HTR3DQ70Z44 454 aa23.82■■□□□ 1.4
COL9A2-201ENST00000372736 C12orf40Q86WS4 652 aa23.82■■□□□ 1.4
COL9A2-201ENST00000372736 ARHGAP18Q8N392 663 aa23.82■■□□□ 1.4
COL9A2-201ENST00000372736 CDK5RAP1Q96SZ6 601 aaKnown RBP23.82■■□□□ 1.4
COL9A2-201ENST00000372736 GPR179Q6PRD1 2367 aa23.82■■□□□ 1.4
COL9A2-201ENST00000372736 FRYLO94915 3013 aa23.82■■□□□ 1.4
COL9A2-201ENST00000372736 GTPBP10A4D1E9 387 aaKnown RBP23.81■■□□□ 1.4
COL9A2-201ENST00000372736 M0QYV0 167 aa23.81■■□□□ 1.4
COL9A2-201ENST00000372736 LMNAP02545 664 aaKnown RBP23.81■■□□□ 1.4
COL9A2-201ENST00000372736 RALAP11233 206 aa23.81■■□□□ 1.4
COL9A2-201ENST00000372736 ADH5P11766 374 aa23.81■■□□□ 1.4
COL9A2-201ENST00000372736 GOLGA8FQ08AF8 430 aa23.81■■□□□ 1.4
COL9A2-201ENST00000372736 GOLGA8DPQ0D2H9 430 aa23.81■■□□□ 1.4
COL9A2-201ENST00000372736 STILQ15468 1287 aa23.81■■□□□ 1.4
COL9A2-201ENST00000372736 CNGA2Q16280 664 aa23.81■■□□□ 1.4
COL9A2-201ENST00000372736 FBXO43Q4G163 708 aa23.81■■□□□ 1.4
COL9A2-201ENST00000372736 LY6G5CQ5SRR4 150 aa23.81■■□□□ 1.4
COL9A2-201ENST00000372736 GJB7Q6PEY0 223 aa23.81■■□□□ 1.4
COL9A2-201ENST00000372736 TADA2BQ86TJ2 420 aa23.81■■□□□ 1.4
COL9A2-201ENST00000372736 FAM114A1Q8IWE2 563 aa23.81■■□□□ 1.4
COL9A2-201ENST00000372736 ATRIPQ8WXE1 791 aa23.81■■□□□ 1.4
COL9A2-201ENST00000372736 KCTD13Q8WZ19 329 aa23.81■■□□□ 1.4
COL9A2-201ENST00000372736 LRRC4Q9HBW1 653 aa23.81■■□□□ 1.4
COL9A2-201ENST00000372736 UBE2TQ9NPD8 197 aaPredicted RBP23.81■■□□□ 1.4
COL9A2-201ENST00000372736 ZNF292O60281 2723 aa23.81■■□□□ 1.4
COL9A2-201ENST00000372736 CFAP54Q96N23 3096 aa23.8■■□□□ 1.4
COL9A2-201ENST00000372736 CHURC1-FNTBB4DL54 471 aa23.8■■□□□ 1.4
COL9A2-201ENST00000372736 SLC9A1P19634 815 aa23.8■■□□□ 1.4
COL9A2-201ENST00000372736 HOXC13P31276 330 aa23.8■■□□□ 1.4
COL9A2-201ENST00000372736 NRLP54845 237 aa23.8■■□□□ 1.4
COL9A2-201ENST00000372736 YWHAGP61981 247 aaKnown RBP eCLIP23.8■■□□□ 1.4
COL9A2-201ENST00000372736 APBA1Q02410 837 aa23.8■■□□□ 1.4
COL9A2-201ENST00000372736 DMWDQ09019 674 aa23.8■■□□□ 1.4
COL9A2-201ENST00000372736 MAN2A1Q16706 1144 aa23.8■■□□□ 1.4
COL9A2-201ENST00000372736 EXOC3L4Q17RC7 722 aa23.8■■□□□ 1.4
COL9A2-201ENST00000372736 GBP6Q6ZN66 633 aa23.8■■□□□ 1.4
COL9A2-201ENST00000372736 SLC35F5Q8WV83 523 aa23.8■■□□□ 1.4
COL9A2-201ENST00000372736 NDRG1Q92597 394 aaKnown RBP23.8■■□□□ 1.4
COL9A2-201ENST00000372736 SECISBP2LQ93073 1101 aaKnown RBP23.8■■□□□ 1.4
COL9A2-201ENST00000372736 APEX2Q9UBZ4 518 aa23.8■■□□□ 1.4
COL9A2-201ENST00000372736 EP300Q09472 2414 aaPredicted RBP23.8■■□□□ 1.4
COL9A2-201ENST00000372736 PTPRZ1P23471 2315 aaPredicted RBP23.79■■□□□ 1.4
COL9A2-201ENST00000372736 GOLGA6L22H0YM25 854 aa23.79■■□□□ 1.4
COL9A2-201ENST00000372736 GABBR2O75899 941 aa23.79■■□□□ 1.4
COL9A2-201ENST00000372736 KRT5P13647 590 aa23.79■■□□□ 1.4
COL9A2-201ENST00000372736 EIF2DP41214 584 aaKnown RBP23.79■■□□□ 1.4
COL9A2-201ENST00000372736 SLC6A11P48066 632 aa23.79■■□□□ 1.4
COL9A2-201ENST00000372736 MESP2Q0VG99 397 aa23.79■■□□□ 1.4
COL9A2-201ENST00000372736 CT47A1Q5JQC4 288 aaPredicted RBP23.79■■□□□ 1.4
COL9A2-201ENST00000372736 Q6ZNB5 142 aa23.79■■□□□ 1.4
COL9A2-201ENST00000372736 ENOSF1Q7L5Y1 443 aa23.79■■□□□ 1.4
COL9A2-201ENST00000372736 MIB1Q86YT6 1006 aa23.79■■□□□ 1.4
COL9A2-201ENST00000372736 SIX6OS1Q8N1H7 587 aa23.79■■□□□ 1.4
COL9A2-201ENST00000372736 SUMF1Q8NBK3 374 aa23.79■■□□□ 1.4
COL9A2-201ENST00000372736 SPHK2Q9NRA0 654 aa23.79■■□□□ 1.4
COL9A2-201ENST00000372736 RASAL2Q9UJF2 1139 aa23.79■■□□□ 1.4
COL9A2-201ENST00000372736 LSM7Q9UK45 103 aaKnown RBP23.79■■□□□ 1.4
COL9A2-201ENST00000372736 HOXC11O43248 304 aaPredicted RBP23.78■■□□□ 1.4
COL9A2-201ENST00000372736 ATG13O75143 517 aa23.78■■□□□ 1.4
COL9A2-201ENST00000372736 STC2O76061 302 aa23.78■■□□□ 1.4
COL9A2-201ENST00000372736 PON1P27169 355 aa23.78■■□□□ 1.4
COL9A2-201ENST00000372736 RGS7P49802 495 aa23.78■■□□□ 1.4
COL9A2-201ENST00000372736 EFEMP1Q12805 493 aa23.78■■□□□ 1.4
COL9A2-201ENST00000372736 HSP90AA4PQ58FG1 418 aa23.78■■□□□ 1.4
COL9A2-201ENST00000372736 MIIPQ5JXC2 388 aa23.78■■□□□ 1.4
COL9A2-201ENST00000372736 PMF1Q6P1K2 205 aa23.78■■□□□ 1.4
COL9A2-201ENST00000372736 TMEM25Q86YD3 366 aa23.78■■□□□ 1.4
COL9A2-201ENST00000372736 SFTPA1Q8IWL2 248 aa23.78■■□□□ 1.4
COL9A2-201ENST00000372736 ETFBKMTQ8IXQ9 262 aa23.78■■□□□ 1.4
COL9A2-201ENST00000372736 SCML4Q8N228 414 aa23.78■■□□□ 1.4
COL9A2-201ENST00000372736 RPLP0P6Q8NHW5 317 aa23.78■■□□□ 1.4
COL9A2-201ENST00000372736 EPC1Q9H2F5 836 aa23.78■■□□□ 1.4
COL9A2-201ENST00000372736 SIX2Q9NPC8 291 aa23.78■■□□□ 1.4
COL9A2-201ENST00000372736 CNGB3Q9NQW8 809 aa23.78■■□□□ 1.4
COL9A2-201ENST00000372736 K7EQS6 105 aa23.77■■□□□ 1.4
COL9A2-201ENST00000372736 CHRM1P11229 460 aaPredicted RBP23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms