RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 DNAJC24Q6P3W2 148 aa16.8■□□□□ 0.28
C9orf78-201ENST00000372447 TTC27Q6P3X3 843 aa16.8■□□□□ 0.28
C9orf78-201ENST00000372447 LILRA6Q6PI73 481 aa16.8■□□□□ 0.28
C9orf78-201ENST00000372447 CCDC137Q6PK04 289 aaKnown RBP16.8■□□□□ 0.28
C9orf78-201ENST00000372447 ERICH1Q86X53 443 aa16.8■□□□□ 0.28
C9orf78-201ENST00000372447 IQCKQ8N0W5 287 aa16.8■□□□□ 0.28
C9orf78-201ENST00000372447 C12orf50Q8NA57 414 aaPredicted RBP16.8■□□□□ 0.28
C9orf78-201ENST00000372447 SLC4A11Q8NBS3 891 aa16.8■□□□□ 0.28
C9orf78-201ENST00000372447 TMEM176AQ96HP8 235 aa16.8■□□□□ 0.28
C9orf78-201ENST00000372447 TNIP3Q96KP6 325 aa16.8■□□□□ 0.28
C9orf78-201ENST00000372447 ZIM3Q96PE6 472 aa16.8■□□□□ 0.28
C9orf78-201ENST00000372447 TRIM31Q9BZY9 425 aa16.8■□□□□ 0.28
C9orf78-201ENST00000372447 LCMT1Q9UIC8 334 aa16.8■□□□□ 0.28
C9orf78-201ENST00000372447 EYSQ5T1H1 3165 aa16.8■□□□□ 0.28
C9orf78-201ENST00000372447 TMEM191CA6NGB0 347 aa16.79■□□□□ 0.28
C9orf78-201ENST00000372447 SPATA31D3P0C874 917 aa16.79■□□□□ 0.28
C9orf78-201ENST00000372447 COILP38432 576 aaPredicted RBP16.79■□□□□ 0.28
C9orf78-201ENST00000372447 FNTAP49354 379 aa16.79■□□□□ 0.28
C9orf78-201ENST00000372447 DRG2P55039 364 aaKnown RBP16.79■□□□□ 0.28
C9orf78-201ENST00000372447 TAS2R40P59535 323 aa16.79■□□□□ 0.28
C9orf78-201ENST00000372447 RPL7AP62424 266 aaKnown RBP16.79■□□□□ 0.28
C9orf78-201ENST00000372447 HYAL1Q12794 435 aa16.79■□□□□ 0.28
C9orf78-201ENST00000372447 DAB2IPQ5VWQ8 1189 aa16.79■□□□□ 0.28
C9orf78-201ENST00000372447 SPATA31D4Q6ZUB0 917 aa16.79■□□□□ 0.28
C9orf78-201ENST00000372447 DCP1BQ8IZD4 617 aaKnown RBP16.79■□□□□ 0.28
C9orf78-201ENST00000372447 GOLGA6L1Q8N7Z2 621 aa16.79■□□□□ 0.28
C9orf78-201ENST00000372447 C12orf29Q8N999 325 aa16.79■□□□□ 0.28
C9orf78-201ENST00000372447 B3GALNT2Q8NCR0 500 aa16.79■□□□□ 0.28
C9orf78-201ENST00000372447 MAIP1Q8WWC4 291 aa16.79■□□□□ 0.28
C9orf78-201ENST00000372447 PPP2R3CQ969Q6 453 aa16.79■□□□□ 0.28
C9orf78-201ENST00000372447 EXOC4Q96A65 974 aa16.79■□□□□ 0.28
C9orf78-201ENST00000372447 LRRC45Q96CN5 670 aa16.79■□□□□ 0.28
C9orf78-201ENST00000372447 PGLYRP2Q96PD5 576 aa16.79■□□□□ 0.28
C9orf78-201ENST00000372447 IGFLR1Q9H665 355 aa16.79■□□□□ 0.28
C9orf78-201ENST00000372447 LRRC19Q9H756 370 aa16.79■□□□□ 0.28
C9orf78-201ENST00000372447 VNN2O95498 520 aa16.79■□□□□ 0.28
C9orf78-201ENST00000372447 ATF2P15336 505 aa16.79■□□□□ 0.28
C9orf78-201ENST00000372447 MDH1BQ5I0G3 518 aa16.79■□□□□ 0.28
C9orf78-201ENST00000372447 TPGS2Q68CL5 300 aa16.79■□□□□ 0.28
C9orf78-201ENST00000372447 MICALL1Q8N3F8 863 aa16.79■□□□□ 0.28
C9orf78-201ENST00000372447 ATAD1Q8NBU5 361 aa16.79■□□□□ 0.28
C9orf78-201ENST00000372447 MYCBPAPQ8TBZ2 947 aa16.79■□□□□ 0.28
C9orf78-201ENST00000372447 SLC22A17Q8WUG5 538 aa16.79■□□□□ 0.28
C9orf78-201ENST00000372447 PCED1BQ96HM7 432 aa16.79■□□□□ 0.28
C9orf78-201ENST00000372447 MCEEQ96PE7 176 aa16.79■□□□□ 0.28
C9orf78-201ENST00000372447 STRIP2Q9ULQ0 834 aa16.79■□□□□ 0.28
C9orf78-201ENST00000372447 USTQ9Y2C2 406 aa16.79■□□□□ 0.28
C9orf78-201ENST00000372447 HCFC2Q9Y5Z7 792 aa16.79■□□□□ 0.28
C9orf78-201ENST00000372447 SPTBN5Q9NRC6 3674 aaKnown RBP16.78■□□□□ 0.28
C9orf78-201ENST00000372447 MTMR11A4FU01 709 aa16.78■□□□□ 0.28
C9orf78-201ENST00000372447 GOLGA8KD6RF30 607 aa16.78■□□□□ 0.28
C9orf78-201ENST00000372447 GLUD1P00367 558 aa16.78■□□□□ 0.28
C9orf78-201ENST00000372447 FOSL2P15408 326 aa16.78■□□□□ 0.28
C9orf78-201ENST00000372447 EPCAMP16422 314 aa16.78■□□□□ 0.28
C9orf78-201ENST00000372447 ADCY1Q08828 1119 aa16.78■□□□□ 0.28
C9orf78-201ENST00000372447 KCNC3Q14003 757 aa16.78■□□□□ 0.28
C9orf78-201ENST00000372447 PPP1R15BQ5SWA1 713 aa16.78■□□□□ 0.28
C9orf78-201ENST00000372447 DCUN1D2Q6PH85 259 aa16.78■□□□□ 0.28
C9orf78-201ENST00000372447 CCDC105Q8IYK2 499 aa16.78■□□□□ 0.28
C9orf78-201ENST00000372447 KATNAL2Q8IYT4 538 aa16.78■□□□□ 0.28
C9orf78-201ENST00000372447 C3orf20Q8ND61 904 aa16.78■□□□□ 0.28
C9orf78-201ENST00000372447 HEXIM2Q96MH2 286 aaKnown RBP16.78■□□□□ 0.28
C9orf78-201ENST00000372447 CDCA3Q99618 268 aaPredicted RBP16.78■□□□□ 0.28
C9orf78-201ENST00000372447 FAM204AQ9H8W3 233 aa16.78■□□□□ 0.28
C9orf78-201ENST00000372447 AFF4Q9UHB7 1163 aaKnown RBP16.78■□□□□ 0.28
C9orf78-201ENST00000372447 O00370 1275 aa16.77■□□□□ 0.28
C9orf78-201ENST00000372447 SEC24AO95486 1093 aa16.77■□□□□ 0.28
C9orf78-201ENST00000372447 SSR1P43307 286 aaKnown RBP16.77■□□□□ 0.28
C9orf78-201ENST00000372447 SMARCB1Q12824 385 aa16.77■□□□□ 0.28
C9orf78-201ENST00000372447 LLGL1Q15334 1064 aa16.77■□□□□ 0.28
C9orf78-201ENST00000372447 SGO2Q562F6 1265 aa16.77■□□□□ 0.28
C9orf78-201ENST00000372447 CYP4A22Q5TCH4 519 aa16.77■□□□□ 0.28
C9orf78-201ENST00000372447 ZNF771Q7L3S4 317 aaPredicted RBP16.77■□□□□ 0.28
C9orf78-201ENST00000372447 VN1R2Q8NFZ6 395 aa16.77■□□□□ 0.28
C9orf78-201ENST00000372447 CRISPLD1Q9H336 500 aa16.77■□□□□ 0.28
C9orf78-201ENST00000372447 FAM49BQ9NUQ9 324 aa16.77■□□□□ 0.28
C9orf78-201ENST00000372447 PSD3Q9NYI0 1048 aa16.77■□□□□ 0.28
C9orf78-201ENST00000372447 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.77■□□□□ 0.28
C9orf78-201ENST00000372447 C1RP00736 705 aa16.77■□□□□ 0.27
C9orf78-201ENST00000372447 FLT3P36888 993 aa16.77■□□□□ 0.27
C9orf78-201ENST00000372447 HSD17B3P37058 310 aa16.77■□□□□ 0.27
C9orf78-201ENST00000372447 ZNF252P-AS1Q0IIN9 211 aa16.77■□□□□ 0.27
C9orf78-201ENST00000372447 DUSP4Q13115 394 aa16.77■□□□□ 0.27
C9orf78-201ENST00000372447 MAPRE1Q15691 268 aaKnown RBP16.77■□□□□ 0.27
C9orf78-201ENST00000372447 NFE2Q16621 373 aaPredicted RBP16.77■□□□□ 0.27
C9orf78-201ENST00000372447 PTPN20Q4JDL3 420 aa16.77■□□□□ 0.27
C9orf78-201ENST00000372447 CCDC50Q8IVM0 306 aa16.77■□□□□ 0.27
C9orf78-201ENST00000372447 EFHBQ8N7U6 833 aa16.77■□□□□ 0.27
C9orf78-201ENST00000372447 KREMEN2Q8NCW0 462 aa16.77■□□□□ 0.27
C9orf78-201ENST00000372447 EXD1Q8NHP7 514 aa16.77■□□□□ 0.27
C9orf78-201ENST00000372447 MYLPFQ96A32 169 aa16.77■□□□□ 0.27
C9orf78-201ENST00000372447 FMO2Q99518 471 aa16.77■□□□□ 0.27
C9orf78-201ENST00000372447 B3GNT5Q9BYG0 378 aa16.77■□□□□ 0.27
C9orf78-201ENST00000372447 RHOBTB2Q9BYZ6 727 aa16.77■□□□□ 0.27
C9orf78-201ENST00000372447 CYTH4Q9UIA0 394 aa16.77■□□□□ 0.27
C9orf78-201ENST00000372447 FBXW11Q9UKB1 542 aa16.77■□□□□ 0.27
C9orf78-201ENST00000372447 SLC27A5Q9Y2P5 690 aa16.77■□□□□ 0.27
C9orf78-201ENST00000372447 SNX24Q9Y343 169 aa16.77■□□□□ 0.27
C9orf78-201ENST00000372447 PCDHB5Q9Y5E4 795 aa16.77■□□□□ 0.27
C9orf78-201ENST00000372447 CLDN5O00501 218 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms