RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 FKBP1CQ5VVH2 108 aa9.19□□□□□ -0.94
ATG4A-203ENST00000372232 DCLRE1AQ6PJP8 1040 aa9.19□□□□□ -0.94
ATG4A-203ENST00000372232 ARHGEF18Q6ZSZ5 1173 aa9.19□□□□□ -0.94
ATG4A-203ENST00000372232 ITIH5Q86UX2 942 aa9.19□□□□□ -0.94
ATG4A-203ENST00000372232 OSTM1Q86WC4 334 aa9.19□□□□□ -0.94
ATG4A-203ENST00000372232 RASSF3Q86WH2 238 aa9.19□□□□□ -0.94
ATG4A-203ENST00000372232 TRIM59Q8IWR1 403 aa9.19□□□□□ -0.94
ATG4A-203ENST00000372232 PTCD3Q96EY7 689 aaKnown RBP9.19□□□□□ -0.94
ATG4A-203ENST00000372232 SNF8Q96H20 258 aa9.19□□□□□ -0.94
ATG4A-203ENST00000372232 TMEM74Q96NL1 305 aa9.19□□□□□ -0.94
ATG4A-203ENST00000372232 REEP2Q9BRK0 252 aa9.19□□□□□ -0.94
ATG4A-203ENST00000372232 B3GNT4Q9C0J1 378 aa9.19□□□□□ -0.94
ATG4A-203ENST00000372232 ZHX3Q9H4I2 956 aa9.19□□□□□ -0.94
ATG4A-203ENST00000372232 GPAMQ9HCL2 828 aa9.19□□□□□ -0.94
ATG4A-203ENST00000372232 ZFP69BQ9UJL9 534 aa9.19□□□□□ -0.94
ATG4A-203ENST00000372232 KIAA1257Q9ULG3 409 aa9.19□□□□□ -0.94
ATG4A-203ENST00000372232 STRIP2Q9ULQ0 834 aa9.19□□□□□ -0.94
ATG4A-203ENST00000372232 C15orf38-AP3S2A0A0A6YYH1 394 aa9.19□□□□□ -0.94
ATG4A-203ENST00000372232 AQP9O43315 295 aa9.19□□□□□ -0.94
ATG4A-203ENST00000372232 PHF2O75151 1096 aa9.19□□□□□ -0.94
ATG4A-203ENST00000372232 CFBP00751 764 aa9.19□□□□□ -0.94
ATG4A-203ENST00000372232 GH1P01241 217 aa9.19□□□□□ -0.94
ATG4A-203ENST00000372232 POLR2MP0CAP2 368 aa9.19□□□□□ -0.94
ATG4A-203ENST00000372232 CDH2P19022 906 aaPredicted RBP9.19□□□□□ -0.94
ATG4A-203ENST00000372232 FOXN2P32314 431 aa9.19□□□□□ -0.94
ATG4A-203ENST00000372232 SLCO1A2P46721 670 aa9.19□□□□□ -0.94
ATG4A-203ENST00000372232 CASP5P51878 434 aa9.19□□□□□ -0.94
ATG4A-203ENST00000372232 DRG2P55039 364 aaKnown RBP9.19□□□□□ -0.94
ATG4A-203ENST00000372232 AP2B1P63010 937 aa9.19□□□□□ -0.94
ATG4A-203ENST00000372232 KCNJ8Q15842 424 aa9.19□□□□□ -0.94
ATG4A-203ENST00000372232 DALRD3Q5D0E6 543 aaKnown RBP9.19□□□□□ -0.94
ATG4A-203ENST00000372232 TWF2Q6IBS0 349 aaKnown RBP9.19□□□□□ -0.94
ATG4A-203ENST00000372232 PPP1R21Q6ZMI0 780 aa9.19□□□□□ -0.94
ATG4A-203ENST00000372232 EPM2AIP1Q7L775 607 aaPredicted RBP9.19□□□□□ -0.94
ATG4A-203ENST00000372232 NET1Q7Z628 596 aaPredicted RBP9.19□□□□□ -0.94
ATG4A-203ENST00000372232 ARPINQ7Z6K5 226 aa9.19□□□□□ -0.94
ATG4A-203ENST00000372232 CDAN1Q8IWY9 1227 aa9.19□□□□□ -0.94
ATG4A-203ENST00000372232 CPSF7Q8N684 471 aaKnown RBP9.19□□□□□ -0.94
ATG4A-203ENST00000372232 ANKRD42Q8N9B4 389 aa9.19□□□□□ -0.94
ATG4A-203ENST00000372232 PPP4R1Q8TF05 950 aa9.19□□□□□ -0.94
ATG4A-203ENST00000372232 DDI1Q8WTU0 396 aa9.19□□□□□ -0.94
ATG4A-203ENST00000372232 CHPT1Q8WUD6 406 aa9.19□□□□□ -0.94
ATG4A-203ENST00000372232 CHURC1Q8WUH1 139 aa9.19□□□□□ -0.94
ATG4A-203ENST00000372232 OTUD5Q96G74 571 aa9.19□□□□□ -0.94
ATG4A-203ENST00000372232 C8orf48Q96LL4 319 aa9.19□□□□□ -0.94
ATG4A-203ENST00000372232 HSD17B14Q9BPX1 270 aa9.19□□□□□ -0.94
ATG4A-203ENST00000372232 LBHD1Q9BQE6 289 aaPredicted RBP9.19□□□□□ -0.94
ATG4A-203ENST00000372232 EIF2AK1Q9BQI3 630 aaKnown RBP9.19□□□□□ -0.94
ATG4A-203ENST00000372232 TMEM39BQ9GZU3 492 aa9.19□□□□□ -0.94
ATG4A-203ENST00000372232 SPON1Q9HCB6 807 aa9.19□□□□□ -0.94
ATG4A-203ENST00000372232 ERVK-11Q9UQG0 969 aa9.19□□□□□ -0.94
ATG4A-203ENST00000372232 CEPT1Q9Y6K0 416 aa9.19□□□□□ -0.94
ATG4A-203ENST00000372232 PLA2G6O60733 806 aa9.18□□□□□ -0.94
ATG4A-203ENST00000372232 NOL4O94818 638 aa9.18□□□□□ -0.94
ATG4A-203ENST00000372232 ESRRAP11474 423 aaPredicted RBP9.18□□□□□ -0.94
ATG4A-203ENST00000372232 AMPD1P23109 780 aa9.18□□□□□ -0.94
ATG4A-203ENST00000372232 KLRC1P26715 233 aa9.18□□□□□ -0.94
ATG4A-203ENST00000372232 ETV3P41162 512 aa9.18□□□□□ -0.94
ATG4A-203ENST00000372232 PCYT1AP49585 367 aa9.18□□□□□ -0.94
ATG4A-203ENST00000372232 WNT7BP56706 349 aa9.18□□□□□ -0.94
ATG4A-203ENST00000372232 IFRD2Q12894 506 aaPredicted RBP9.18□□□□□ -0.94
ATG4A-203ENST00000372232 MPP2Q14168 576 aa9.18□□□□□ -0.94
ATG4A-203ENST00000372232 USP41Q3LFD5 358 aa9.18□□□□□ -0.94
ATG4A-203ENST00000372232 RWDD4Q6NW29 188 aaKnown RBP9.18□□□□□ -0.94
ATG4A-203ENST00000372232 ZDHHC24Q6UX98 284 aa9.18□□□□□ -0.94
ATG4A-203ENST00000372232 RGS9BPQ6ZS82 235 aa9.18□□□□□ -0.94
ATG4A-203ENST00000372232 RFPL4BQ6ZWI9 263 aa9.18□□□□□ -0.94
ATG4A-203ENST00000372232 OTOP1Q7RTM1 612 aa9.18□□□□□ -0.94
ATG4A-203ENST00000372232 CLNKQ7Z7G1 428 aa9.18□□□□□ -0.94
ATG4A-203ENST00000372232 CENPSQ8N2Z9 138 aa9.18□□□□□ -0.94
ATG4A-203ENST00000372232 C3orf58Q8NDZ4 430 aa9.18□□□□□ -0.94
ATG4A-203ENST00000372232 SUN5Q8TC36 379 aa9.18□□□□□ -0.94
ATG4A-203ENST00000372232 BORCS5Q969J3 196 aa9.18□□□□□ -0.94
ATG4A-203ENST00000372232 MCUR1Q96AQ8 359 aa9.18□□□□□ -0.94
ATG4A-203ENST00000372232 SERPINB12Q96P63 405 aa9.18□□□□□ -0.94
ATG4A-203ENST00000372232 WDR18Q9BV38 432 aa9.18□□□□□ -0.94
ATG4A-203ENST00000372232 AS3MTQ9HBK9 375 aa9.18□□□□□ -0.94
ATG4A-203ENST00000372232 ZFYVE28Q9HCC9 887 aa9.18□□□□□ -0.94
ATG4A-203ENST00000372232 RRN3Q9NYV6 651 aa9.18□□□□□ -0.94
ATG4A-203ENST00000372232 CEP72Q9P209 647 aa9.18□□□□□ -0.94
ATG4A-203ENST00000372232 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.18□□□□□ -0.94
ATG4A-203ENST00000372232 COL4A5P29400 1685 aa9.18□□□□□ -0.94
ATG4A-203ENST00000372232 BTNL10A8MVZ5 291 aa9.17□□□□□ -0.94
ATG4A-203ENST00000372232 K7EPI3 171 aa9.17□□□□□ -0.94
ATG4A-203ENST00000372232 CDK2AP1O14519 115 aa9.17□□□□□ -0.94
ATG4A-203ENST00000372232 C2CD2LO14523 706 aa9.17□□□□□ -0.94
ATG4A-203ENST00000372232 GYG2O15488 501 aa9.17□□□□□ -0.94
ATG4A-203ENST00000372232 PDPK1O15530 556 aa9.17□□□□□ -0.94
ATG4A-203ENST00000372232 RIPK2O43353 540 aa9.17□□□□□ -0.94
ATG4A-203ENST00000372232 HAUS5O94927 633 aa9.17□□□□□ -0.94
ATG4A-203ENST00000372232 CD48P09326 243 aa9.17□□□□□ -0.94
ATG4A-203ENST00000372232 ITGA4P13612 1032 aa9.17□□□□□ -0.94
ATG4A-203ENST00000372232 CREB1P16220 341 aa9.17□□□□□ -0.94
ATG4A-203ENST00000372232 DPEP1P16444 411 aa9.17□□□□□ -0.94
ATG4A-203ENST00000372232 TCEA1P23193 301 aaKnown RBP9.17□□□□□ -0.94
ATG4A-203ENST00000372232 IL4RP24394 825 aa9.17□□□□□ -0.94
ATG4A-203ENST00000372232 RCVRNP35243 200 aa9.17□□□□□ -0.94
ATG4A-203ENST00000372232 COPB2P35606 906 aa9.17□□□□□ -0.94
ATG4A-203ENST00000372232 CAP2P40123 477 aa9.17□□□□□ -0.94
ATG4A-203ENST00000372232 STT3AP46977 705 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms