RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 ALOX15BO15296 676 aa12.22□□□□□ -0.45
PDE6C-201ENST00000371447 GPR32O75388 356 aa12.22□□□□□ -0.45
PDE6C-201ENST00000371447 SUN1O94901 812 aa12.22□□□□□ -0.45
PDE6C-201ENST00000371447 MLH1P40692 756 aa12.22□□□□□ -0.45
PDE6C-201ENST00000371447 AP1B1Q10567 949 aa12.22□□□□□ -0.45
PDE6C-201ENST00000371447 OLFML1Q6UWY5 402 aa12.22□□□□□ -0.45
PDE6C-201ENST00000371447 DEFB106AQ8N104 65 aa12.22□□□□□ -0.45
PDE6C-201ENST00000371447 NIPA2Q8N8Q9 360 aa12.22□□□□□ -0.45
PDE6C-201ENST00000371447 ATP11CQ8NB49 1132 aa12.22□□□□□ -0.45
PDE6C-201ENST00000371447 LRRC8CQ8TDW0 803 aa12.22□□□□□ -0.45
PDE6C-201ENST00000371447 CCT6BQ92526 530 aa12.22□□□□□ -0.45
PDE6C-201ENST00000371447 MAML1Q92585 1016 aa12.22□□□□□ -0.45
PDE6C-201ENST00000371447 SNX27Q96L92 541 aa12.22□□□□□ -0.45
PDE6C-201ENST00000371447 KCNK16Q96T55 309 aa12.22□□□□□ -0.45
PDE6C-201ENST00000371447 NPHS2Q9NP85 383 aa12.22□□□□□ -0.45
PDE6C-201ENST00000371447 USP12O75317 370 aa12.22□□□□□ -0.45
PDE6C-201ENST00000371447 MT-ND3P03897 115 aa12.22□□□□□ -0.45
PDE6C-201ENST00000371447 INHBAP08476 426 aa12.22□□□□□ -0.45
PDE6C-201ENST00000371447 GEMIN4P57678 1058 aaKnown RBP12.22□□□□□ -0.45
PDE6C-201ENST00000371447 FAAP100Q0VG06 881 aa12.22□□□□□ -0.45
PDE6C-201ENST00000371447 MDH1BQ5I0G3 518 aa12.22□□□□□ -0.45
PDE6C-201ENST00000371447 PIGZQ86VD9 579 aa12.22□□□□□ -0.45
PDE6C-201ENST00000371447 ADGRF2Q8IZF7 708 aa12.22□□□□□ -0.45
PDE6C-201ENST00000371447 STKLD1Q8NE28 680 aa12.22□□□□□ -0.45
PDE6C-201ENST00000371447 PAAF1Q9BRP4 392 aa12.22□□□□□ -0.45
PDE6C-201ENST00000371447 TMEM109Q9BVC6 243 aa12.22□□□□□ -0.45
PDE6C-201ENST00000371447 ETNK1Q9HBU6 452 aa12.22□□□□□ -0.45
PDE6C-201ENST00000371447 AP4E1Q9UPM8 1137 aa12.22□□□□□ -0.45
PDE6C-201ENST00000371447 PPME1Q9Y570 386 aa12.22□□□□□ -0.45
PDE6C-201ENST00000371447 SNX10Q9Y5X0 201 aa12.22□□□□□ -0.45
PDE6C-201ENST00000371447 KCNK1O00180 336 aa12.22□□□□□ -0.45
PDE6C-201ENST00000371447 TNPO2O14787 897 aaKnown RBP12.22□□□□□ -0.45
PDE6C-201ENST00000371447 TOP3BO95985 862 aaKnown RBP12.22□□□□□ -0.45
PDE6C-201ENST00000371447 SULT1E1P49888 294 aa12.22□□□□□ -0.45
PDE6C-201ENST00000371447 KCNJ2P63252 427 aa12.22□□□□□ -0.45
PDE6C-201ENST00000371447 RNASELQ05823 741 aaKnown RBP12.22□□□□□ -0.45
PDE6C-201ENST00000371447 TFDP2Q14188 446 aa12.22□□□□□ -0.45
PDE6C-201ENST00000371447 GRB14Q14449 540 aa12.22□□□□□ -0.45
PDE6C-201ENST00000371447 KCNT2Q6UVM3 1135 aa12.22□□□□□ -0.45
PDE6C-201ENST00000371447 VSIG1Q86XK7 387 aa12.22□□□□□ -0.45
PDE6C-201ENST00000371447 NAT8LQ8N9F0 302 aa12.22□□□□□ -0.45
PDE6C-201ENST00000371447 TCP10LQ8TDR4 215 aa12.22□□□□□ -0.45
PDE6C-201ENST00000371447 CKAP2Q8WWK9 683 aa12.22□□□□□ -0.45
PDE6C-201ENST00000371447 LRRC4Q9HBW1 653 aa12.22□□□□□ -0.45
PDE6C-201ENST00000371447 KLHL14Q9P2G3 628 aa12.22□□□□□ -0.45
PDE6C-201ENST00000371447 PSMC3IPQ9P2W1 217 aaPredicted RBP12.22□□□□□ -0.45
PDE6C-201ENST00000371447 RABGEF1Q9UJ41 708 aa12.22□□□□□ -0.45
PDE6C-201ENST00000371447 NUDT5Q9UKK9 219 aa12.22□□□□□ -0.45
PDE6C-201ENST00000371447 SHOC2Q9UQ13 582 aa12.22□□□□□ -0.45
PDE6C-201ENST00000371447 IPPQ9Y573 584 aa12.22□□□□□ -0.45
PDE6C-201ENST00000371447 TRIP11Q15643 1979 aa12.22□□□□□ -0.45
PDE6C-201ENST00000371447 PTPRFP10586 1907 aa12.22□□□□□ -0.45
PDE6C-201ENST00000371447 A0A0G2JND7 137 aa12.21□□□□□ -0.45
PDE6C-201ENST00000371447 CYB561D2O14569 222 aa12.21□□□□□ -0.45
PDE6C-201ENST00000371447 POMCP01189 267 aa12.21□□□□□ -0.45
PDE6C-201ENST00000371447 DESP17661 470 aa12.21□□□□□ -0.45
PDE6C-201ENST00000371447 IL4RP24394 825 aa12.21□□□□□ -0.45
PDE6C-201ENST00000371447 PHBP35232 272 aa12.21□□□□□ -0.45
PDE6C-201ENST00000371447 GMPRP36959 345 aa12.21□□□□□ -0.45
PDE6C-201ENST00000371447 PSEN2P49810 448 aa12.21□□□□□ -0.45
PDE6C-201ENST00000371447 FAM187BQ17R55 369 aa12.21□□□□□ -0.45
PDE6C-201ENST00000371447 IQSEC1Q6DN90 963 aa12.21□□□□□ -0.45
PDE6C-201ENST00000371447 HFE2Q6ZVN8 426 aa12.21□□□□□ -0.45
PDE6C-201ENST00000371447 SPATS2Q86XZ4 545 aaKnown RBP12.21□□□□□ -0.45
PDE6C-201ENST00000371447 MPP5Q8N3R9 675 aa12.21□□□□□ -0.45
PDE6C-201ENST00000371447 PQLC3Q8N755 202 aa12.21□□□□□ -0.45
PDE6C-201ENST00000371447 LINC01465Q8N7H1 131 aa12.21□□□□□ -0.45
PDE6C-201ENST00000371447 FAM111AQ96PZ2 611 aa12.21□□□□□ -0.45
PDE6C-201ENST00000371447 UBN1Q9NPG3 1134 aa12.21□□□□□ -0.45
PDE6C-201ENST00000371447 ZC3H7BQ9UGR2 993 aaKnown RBP12.21□□□□□ -0.45
PDE6C-201ENST00000371447 TCRBV9S1A1TA0A576 114 aa12.21□□□□□ -0.45
PDE6C-201ENST00000371447 M0QYT0 321 aa12.21□□□□□ -0.45
PDE6C-201ENST00000371447 METTL18O95568 372 aa12.21□□□□□ -0.45
PDE6C-201ENST00000371447 KITP10721 976 aa12.21□□□□□ -0.45
PDE6C-201ENST00000371447 PYGBP11216 843 aa12.21□□□□□ -0.45
PDE6C-201ENST00000371447 TAC1P20366 129 aa12.21□□□□□ -0.45
PDE6C-201ENST00000371447 SLC10A2Q12908 348 aaPredicted RBP12.21□□□□□ -0.45
PDE6C-201ENST00000371447 PTK7Q13308 1070 aa12.21□□□□□ -0.45
PDE6C-201ENST00000371447 MROH9Q5TGP6 573 aa12.21□□□□□ -0.45
PDE6C-201ENST00000371447 CYP4V2Q6ZWL3 525 aaPredicted RBP12.21□□□□□ -0.45
PDE6C-201ENST00000371447 SLC35F5Q8WV83 523 aa12.21□□□□□ -0.45
PDE6C-201ENST00000371447 CENPTQ96BT3 561 aa12.21□□□□□ -0.45
PDE6C-201ENST00000371447 L3MBTL3Q96JM7 780 aaPredicted RBP12.21□□□□□ -0.45
PDE6C-201ENST00000371447 TMEM237Q96Q45 408 aa12.21□□□□□ -0.45
PDE6C-201ENST00000371447 APOL2Q9BQE5 337 aa12.21□□□□□ -0.45
PDE6C-201ENST00000371447 ECT2Q9H8V3 914 aa12.21□□□□□ -0.45
PDE6C-201ENST00000371447 NMRK2Q9NPI5 230 aa12.21□□□□□ -0.45
PDE6C-201ENST00000371447 KLC4Q9NSK0 619 aa12.21□□□□□ -0.45
PDE6C-201ENST00000371447 PHTF1Q9UMS5 762 aa12.21□□□□□ -0.45
PDE6C-201ENST00000371447 CITO14578 2027 aa12.21□□□□□ -0.46
PDE6C-201ENST00000371447 ABCG1P45844 678 aa12.21□□□□□ -0.46
PDE6C-201ENST00000371447 DCAF4L1Q3SXM0 396 aa12.21□□□□□ -0.46
PDE6C-201ENST00000371447 SYPL2Q5VXT5 272 aa12.21□□□□□ -0.46
PDE6C-201ENST00000371447 FITM2Q8N6M3 262 aa12.21□□□□□ -0.46
PDE6C-201ENST00000371447 SLC7A14Q8TBB6 771 aa12.21□□□□□ -0.46
PDE6C-201ENST00000371447 KHSRPQ92945 711 aaKnown RBP eCLIP12.21□□□□□ -0.46
PDE6C-201ENST00000371447 TTC25Q96NG3 672 aa12.21□□□□□ -0.46
PDE6C-201ENST00000371447 NFKBIZQ9BYH8 718 aa12.21□□□□□ -0.46
PDE6C-201ENST00000371447 MARCOQ9UEW3 520 aaPredicted RBP12.21□□□□□ -0.46
PDE6C-201ENST00000371447 UBQLN1Q9UMX0 589 aaKnown RBP12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms