RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 RIC8BQ9NVN3 520 aa15.21■□□□□ 0.03
NDC1-201ENST00000371429 CAPN6Q9Y6Q1 641 aa15.21■□□□□ 0.03
NDC1-201ENST00000371429 FRMD3A2A2Y4 597 aa15.21■□□□□ 0.03
NDC1-201ENST00000371429 ZSCAN9O15535 394 aaPredicted RBP15.21■□□□□ 0.03
NDC1-201ENST00000371429 ADCY6O43306 1168 aa15.21■□□□□ 0.03
NDC1-201ENST00000371429 PDCD2Q16342 344 aaPredicted RBP15.21■□□□□ 0.03
NDC1-201ENST00000371429 AGAP9Q5VTM2 703 aa15.21■□□□□ 0.03
NDC1-201ENST00000371429 WSCD1Q658N2 575 aa15.21■□□□□ 0.03
NDC1-201ENST00000371429 SPATA21Q7Z572 469 aa15.21■□□□□ 0.03
NDC1-201ENST00000371429 REM2Q8IYK8 340 aaPredicted RBP15.21■□□□□ 0.03
NDC1-201ENST00000371429 PHACTR4Q8IZ21 702 aa15.21■□□□□ 0.03
NDC1-201ENST00000371429 ACTL9Q8TC94 416 aa15.21■□□□□ 0.03
NDC1-201ENST00000371429 KAT2BQ92831 832 aa15.21■□□□□ 0.03
NDC1-201ENST00000371429 TMEM121Q9BTD3 319 aa15.21■□□□□ 0.03
NDC1-201ENST00000371429 FAM129AQ9BZQ8 928 aa15.21■□□□□ 0.03
NDC1-201ENST00000371429 ANLNQ9NQW6 1124 aa15.21■□□□□ 0.03
NDC1-201ENST00000371429 ST3GAL5Q9UNP4 418 aa15.21■□□□□ 0.03
NDC1-201ENST00000371429 H2AFYO75367 372 aaKnown RBP15.21■□□□□ 0.03
NDC1-201ENST00000371429 ZBTB48P10074 688 aaPredicted RBP15.21■□□□□ 0.03
NDC1-201ENST00000371429 CCDC130P13994 396 aa15.21■□□□□ 0.03
NDC1-201ENST00000371429 NBPF20Q3BBV1 942 aa15.21■□□□□ 0.03
NDC1-201ENST00000371429 EFL1Q7Z2Z2 1120 aaKnown RBP15.21■□□□□ 0.03
NDC1-201ENST00000371429 PRUNE1Q86TP1 453 aa15.21■□□□□ 0.03
NDC1-201ENST00000371429 TAGAPQ8N103 731 aa15.21■□□□□ 0.03
NDC1-201ENST00000371429 SH2D3CQ8N5H7 860 aa15.21■□□□□ 0.03
NDC1-201ENST00000371429 SELENONQ9NZV5 590 aa15.21■□□□□ 0.03
NDC1-201ENST00000371429 PLA2G6O60733 806 aa15.21■□□□□ 0.02
NDC1-201ENST00000371429 LTFP02788 710 aa15.21■□□□□ 0.02
NDC1-201ENST00000371429 MAP2K2P36507 400 aa15.21■□□□□ 0.02
NDC1-201ENST00000371429 RENBPP51606 427 aa15.21■□□□□ 0.02
NDC1-201ENST00000371429 SLC29A2Q14542 456 aa15.21■□□□□ 0.02
NDC1-201ENST00000371429 DUSP28Q4G0W2 176 aa15.21■□□□□ 0.02
NDC1-201ENST00000371429 PREPLQ4J6C6 727 aaPredicted RBP15.21■□□□□ 0.02
NDC1-201ENST00000371429 RGS9BPQ6ZS82 235 aa15.21■□□□□ 0.02
NDC1-201ENST00000371429 C11orf96Q7Z7L8 435 aa15.21■□□□□ 0.02
NDC1-201ENST00000371429 LGI2Q8N0V4 545 aa15.21■□□□□ 0.02
NDC1-201ENST00000371429 RIBC1Q8N443 379 aaPredicted RBP15.21■□□□□ 0.02
NDC1-201ENST00000371429 NOA1Q8NC60 698 aaKnown RBP15.21■□□□□ 0.02
NDC1-201ENST00000371429 HELQQ8TDG4 1101 aa15.21■□□□□ 0.02
NDC1-201ENST00000371429 UROC1Q96N76 676 aa15.21■□□□□ 0.02
NDC1-201ENST00000371429 DCLK3Q9C098 648 aa15.21■□□□□ 0.02
NDC1-201ENST00000371429 OSGEPL1Q9H4B0 414 aa15.21■□□□□ 0.02
NDC1-201ENST00000371429 UBP1Q9NZI7 540 aa15.21■□□□□ 0.02
NDC1-201ENST00000371429 DRG1Q9Y295 367 aaKnown RBP15.21■□□□□ 0.02
NDC1-201ENST00000371429 A0A087X0B3 334 aa15.2■□□□□ 0.02
NDC1-201ENST00000371429 CAPN15O75808 1086 aa15.2■□□□□ 0.02
NDC1-201ENST00000371429 CRYBB1P53674 252 aaPredicted RBP15.2■□□□□ 0.02
NDC1-201ENST00000371429 KDSRQ06136 332 aa15.2■□□□□ 0.02
NDC1-201ENST00000371429 DDX39BQ13838 428 aaKnown RBP15.2■□□□□ 0.02
NDC1-201ENST00000371429 KRT72Q14CN4 511 aa15.2■□□□□ 0.02
NDC1-201ENST00000371429 VPS37AQ8NEZ2 397 aa15.2■□□□□ 0.02
NDC1-201ENST00000371429 VCPIP1Q96JH7 1222 aa15.2■□□□□ 0.02
NDC1-201ENST00000371429 UBE2OQ9C0C9 1292 aaKnown RBP15.2■□□□□ 0.02
NDC1-201ENST00000371429 SPASTQ9UBP0 616 aa15.2■□□□□ 0.02
NDC1-201ENST00000371429 A0A0A6YYK5 440 aaPredicted RBP15.2■□□□□ 0.02
NDC1-201ENST00000371429 USP17L7P0C7H9 530 aa15.2■□□□□ 0.02
NDC1-201ENST00000371429 CHN1P15882 459 aa15.2■□□□□ 0.02
NDC1-201ENST00000371429 PTPN1P18031 435 aaKnown RBP15.2■□□□□ 0.02
NDC1-201ENST00000371429 PNKPQ96T60 521 aa15.2■□□□□ 0.02
NDC1-201ENST00000371429 ULBP1Q9BZM6 244 aa15.2■□□□□ 0.02
NDC1-201ENST00000371429 CHCHD3Q9NX63 227 aaKnown RBP15.2■□□□□ 0.02
NDC1-201ENST00000371429 HNRNPCL2B2RXH8 293 aa15.2■□□□□ 0.02
NDC1-201ENST00000371429 SPTLC1O15269 473 aa15.2■□□□□ 0.02
NDC1-201ENST00000371429 HNRNPCL1O60812 293 aaKnown RBP15.2■□□□□ 0.02
NDC1-201ENST00000371429 PBLDP30039 288 aaPredicted RBP15.2■□□□□ 0.02
NDC1-201ENST00000371429 CAPSQ13938 189 aa15.2■□□□□ 0.02
NDC1-201ENST00000371429 USP2O75604 605 aaPredicted RBP15.2■□□□□ 0.02
NDC1-201ENST00000371429 SLC6A3Q01959 620 aa15.2■□□□□ 0.02
NDC1-201ENST00000371429 EVX2Q03828 476 aa15.2■□□□□ 0.02
NDC1-201ENST00000371429 ST3GAL1Q11201 340 aa15.2■□□□□ 0.02
NDC1-201ENST00000371429 PRPF18Q99633 342 aaKnown RBP15.2■□□□□ 0.02
NDC1-201ENST00000371429 LACRTQ9GZZ8 138 aa15.2■□□□□ 0.02
NDC1-201ENST00000371429 CDT1Q9H211 546 aa15.2■□□□□ 0.02
NDC1-201ENST00000371429 NPHS2Q9NP85 383 aa15.2■□□□□ 0.02
NDC1-201ENST00000371429 MARCH2Q9P0N8 246 aa15.2■□□□□ 0.02
NDC1-201ENST00000371429 NUDT5Q9UKK9 219 aa15.2■□□□□ 0.02
NDC1-201ENST00000371429 TRIM16O95361 564 aa15.19■□□□□ 0.02
NDC1-201ENST00000371429 SPRYD7Q5W111 196 aa15.19■□□□□ 0.02
NDC1-201ENST00000371429 ERAP2Q6P179 960 aa15.19■□□□□ 0.02
NDC1-201ENST00000371429 DENND1BQ6P3S1 775 aa15.19■□□□□ 0.02
NDC1-201ENST00000371429 LBX2Q6XYB7 198 aa15.19■□□□□ 0.02
NDC1-201ENST00000371429 RBM43Q6ZSC3 357 aaKnown RBP15.19■□□□□ 0.02
NDC1-201ENST00000371429 UNC93AQ86WB7 457 aa15.19■□□□□ 0.02
NDC1-201ENST00000371429 TRIML2Q8N7C3 387 aa15.19■□□□□ 0.02
NDC1-201ENST00000371429 LPCAT1Q8NF37 534 aa15.19■□□□□ 0.02
NDC1-201ENST00000371429 CAMKK2Q96RR4 588 aa15.19■□□□□ 0.02
NDC1-201ENST00000371429 PPP1R37O75864 691 aa15.19■□□□□ 0.02
NDC1-201ENST00000371429 DNAJC8O75937 253 aaPredicted RBP15.19■□□□□ 0.02
NDC1-201ENST00000371429 IL10P22301 178 aa15.19■□□□□ 0.02
NDC1-201ENST00000371429 RAP1GDS1P52306 607 aa15.19■□□□□ 0.02
NDC1-201ENST00000371429 SGCGQ13326 291 aa15.19■□□□□ 0.02
NDC1-201ENST00000371429 NECAB2Q7Z6G3 386 aa15.19■□□□□ 0.02
NDC1-201ENST00000371429 LZTR1Q8N653 840 aa15.19■□□□□ 0.02
NDC1-201ENST00000371429 FBXO36Q8NEA4 188 aa15.19■□□□□ 0.02
NDC1-201ENST00000371429 DUSP9Q99956 384 aaKnown RBP15.19■□□□□ 0.02
NDC1-201ENST00000371429 POPDC2Q9HBU9 364 aa15.19■□□□□ 0.02
NDC1-201ENST00000371429 TIMM44O43615 452 aa15.19■□□□□ 0.02
NDC1-201ENST00000371429 SERPINB4P48594 390 aa15.19■□□□□ 0.02
NDC1-201ENST00000371429 GTF2BQ00403 316 aa15.19■□□□□ 0.02
NDC1-201ENST00000371429 CAMK2GQ13555 558 aaPredicted RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms