RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 KIF2BQ8N4N8 673 aa13.35□□□□□ -0.27
GPC3-201ENST00000370818 ZCCHC9Q8N567 271 aaKnown RBP13.35□□□□□ -0.27
GPC3-201ENST00000370818 B4GALNT2Q8NHY0 566 aa13.35□□□□□ -0.27
GPC3-201ENST00000370818 STK32AQ8WU08 396 aa13.35□□□□□ -0.27
GPC3-201ENST00000370818 ZFP42Q96MM3 310 aa13.35□□□□□ -0.27
GPC3-201ENST00000370818 ZNF560Q96MR9 790 aa13.35□□□□□ -0.27
GPC3-201ENST00000370818 NINJ2Q9NZG7 142 aa13.35□□□□□ -0.27
GPC3-201ENST00000370818 HESX1Q9UBX0 185 aa13.35□□□□□ -0.27
GPC3-201ENST00000370818 GTF2IRD1Q9UHL9 959 aa13.35□□□□□ -0.27
GPC3-201ENST00000370818 MEIS3P2A8K0S8 358 aa13.35□□□□□ -0.27
GPC3-201ENST00000370818 DPYSL4O14531 572 aa13.35□□□□□ -0.27
GPC3-201ENST00000370818 PGK1P00558 417 aa13.35□□□□□ -0.27
GPC3-201ENST00000370818 IGFBP6P24592 240 aaPredicted RBP13.35□□□□□ -0.27
GPC3-201ENST00000370818 PNPLA4P41247 253 aa13.35□□□□□ -0.27
GPC3-201ENST00000370818 MSH2P43246 934 aa13.35□□□□□ -0.27
GPC3-201ENST00000370818 TAF6P49848 677 aa13.35□□□□□ -0.27
GPC3-201ENST00000370818 LILRA4P59901 499 aa13.35□□□□□ -0.27
GPC3-201ENST00000370818 ATP11AP98196 1134 aa13.35□□□□□ -0.27
GPC3-201ENST00000370818 GPS1Q13098 491 aa13.35□□□□□ -0.27
GPC3-201ENST00000370818 MMRN1Q13201 1228 aa13.35□□□□□ -0.27
GPC3-201ENST00000370818 AUHQ13825 339 aaKnown RBP13.35□□□□□ -0.27
GPC3-201ENST00000370818 MFSD5Q6N075 450 aa13.35□□□□□ -0.27
GPC3-201ENST00000370818 KCNV2Q8TDN2 545 aa13.35□□□□□ -0.27
GPC3-201ENST00000370818 KLHL29Q96CT2 875 aa13.35□□□□□ -0.27
GPC3-201ENST00000370818 MTG1Q9BT17 334 aaPredicted RBP13.35□□□□□ -0.27
GPC3-201ENST00000370818 CALN1Q9BXU9 219 aa13.35□□□□□ -0.27
GPC3-201ENST00000370818 PCDH9Q9HC56 1237 aa13.35□□□□□ -0.27
GPC3-201ENST00000370818 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.35□□□□□ -0.27
GPC3-201ENST00000370818 GGT7Q9UJ14 662 aa13.35□□□□□ -0.27
GPC3-201ENST00000370818 GABRQQ9UN88 632 aa13.35□□□□□ -0.27
GPC3-201ENST00000370818 CDY2AQ9Y6F7 541 aa13.35□□□□□ -0.27
GPC3-201ENST00000370818 BRCA2P51587 3418 aa13.35□□□□□ -0.27
GPC3-201ENST00000370818 PDCD11Q14690 1871 aaKnown RBP13.35□□□□□ -0.27
GPC3-201ENST00000370818 A0A1B0GVG6 124 aa13.34□□□□□ -0.27
GPC3-201ENST00000370818 SGK1O00141 431 aa13.34□□□□□ -0.27
GPC3-201ENST00000370818 RGS16O15492 202 aaPredicted RBP13.34□□□□□ -0.27
GPC3-201ENST00000370818 XPOTO43592 962 aaKnown RBP13.34□□□□□ -0.27
GPC3-201ENST00000370818 MMP13P45452 471 aa13.34□□□□□ -0.27
GPC3-201ENST00000370818 MRPS6P82932 125 aaKnown RBP13.34□□□□□ -0.27
GPC3-201ENST00000370818 MXRA7P84157 204 aa13.34□□□□□ -0.27
GPC3-201ENST00000370818 SREBF2Q12772 1141 aa13.34□□□□□ -0.27
GPC3-201ENST00000370818 BNIP1Q12981 228 aa13.34□□□□□ -0.27
GPC3-201ENST00000370818 LONRF1Q17RB8 773 aa13.34□□□□□ -0.27
GPC3-201ENST00000370818 GDF6Q6KF10 455 aaPredicted RBP13.34□□□□□ -0.27
GPC3-201ENST00000370818 CROCCP2Q86T23 111 aa13.34□□□□□ -0.27
GPC3-201ENST00000370818 TRIM74Q86UV6 250 aa13.34□□□□□ -0.27
GPC3-201ENST00000370818 TRIM73Q86UV7 250 aa13.34□□□□□ -0.27
GPC3-201ENST00000370818 ANKRD52Q8NB46 1076 aa13.34□□□□□ -0.27
GPC3-201ENST00000370818 TTC13Q8NBP0 860 aa13.34□□□□□ -0.27
GPC3-201ENST00000370818 APPL2Q8NEU8 664 aa13.34□□□□□ -0.27
GPC3-201ENST00000370818 PPP1R10Q96QC0 940 aaKnown RBP13.34□□□□□ -0.27
GPC3-201ENST00000370818 RBM15Q96T37 977 aaKnown RBP eCLIP13.34□□□□□ -0.271e-15■■□□□ 12.7
GPC3-201ENST00000370818 PAIP2Q9BPZ3 127 aaKnown RBP13.34□□□□□ -0.27
GPC3-201ENST00000370818 SYT15Q9BQS2 421 aa13.34□□□□□ -0.27
GPC3-201ENST00000370818 ROPN1BQ9BZX4 212 aaPredicted RBP13.34□□□□□ -0.27
GPC3-201ENST00000370818 ZCWPW1Q9H0M4 648 aa13.34□□□□□ -0.27
GPC3-201ENST00000370818 ROPN1Q9HAT0 212 aaPredicted RBP13.34□□□□□ -0.27
GPC3-201ENST00000370818 TLL2Q9Y6L7 1015 aa13.34□□□□□ -0.27
GPC3-201ENST00000370818 APOC4-APOC2K7ER74 178 aa13.34□□□□□ -0.27
GPC3-201ENST00000370818 CA12O43570 354 aa13.34□□□□□ -0.27
GPC3-201ENST00000370818 KPNA6O60684 536 aa13.34□□□□□ -0.27
GPC3-201ENST00000370818 AGTP01019 485 aa13.34□□□□□ -0.27
GPC3-201ENST00000370818 IFNB1P01574 187 aa13.34□□□□□ -0.27
GPC3-201ENST00000370818 APOC2P02655 101 aa13.34□□□□□ -0.27
GPC3-201ENST00000370818 ADORA2BP29275 332 aa13.34□□□□□ -0.27
GPC3-201ENST00000370818 RNASEH2BQ5TBB1 312 aaKnown RBP13.34□□□□□ -0.27
GPC3-201ENST00000370818 TRIM68Q6AZZ1 485 aa13.34□□□□□ -0.27
GPC3-201ENST00000370818 GSTCDQ8NEC7 633 aa13.34□□□□□ -0.27
GPC3-201ENST00000370818 CLEC4CQ8WTT0 213 aa13.34□□□□□ -0.27
GPC3-201ENST00000370818 GORASP1Q9BQQ3 440 aa13.34□□□□□ -0.27
GPC3-201ENST00000370818 FRMD8P1Q9BZ68 369 aaPredicted RBP13.34□□□□□ -0.27
GPC3-201ENST00000370818 RSAD1Q9HA92 442 aa13.34□□□□□ -0.27
GPC3-201ENST00000370818 STK38LQ9Y2H1 464 aa13.34□□□□□ -0.27
GPC3-201ENST00000370818 PRPSAP2O60256 369 aa13.33□□□□□ -0.27
GPC3-201ENST00000370818 SNX3O60493 162 aa13.33□□□□□ -0.27
GPC3-201ENST00000370818 GNAZP19086 355 aa13.33□□□□□ -0.27
GPC3-201ENST00000370818 LRPAP1P30533 357 aa13.33□□□□□ -0.27
GPC3-201ENST00000370818 TM4SF4P48230 202 aa13.33□□□□□ -0.27
GPC3-201ENST00000370818 RPL34P49207 117 aaKnown RBP13.33□□□□□ -0.27
GPC3-201ENST00000370818 CDH6P55285 790 aa13.33□□□□□ -0.27
GPC3-201ENST00000370818 BST2Q10589 180 aaKnown RBP13.33□□□□□ -0.27
GPC3-201ENST00000370818 TRIM32Q13049 653 aa13.33□□□□□ -0.27
GPC3-201ENST00000370818 DPYSL3Q14195 570 aa13.33□□□□□ -0.27
GPC3-201ENST00000370818 LBRQ14739 615 aaKnown RBP13.33□□□□□ -0.27
GPC3-201ENST00000370818 CCDC142Q17RM4 750 aa13.33□□□□□ -0.27
GPC3-201ENST00000370818 SV2CQ496J9 727 aa13.33□□□□□ -0.27
GPC3-201ENST00000370818 OSTM1Q86WC4 334 aa13.33□□□□□ -0.27
GPC3-201ENST00000370818 RFX6Q8HWS3 928 aa13.33□□□□□ -0.27
GPC3-201ENST00000370818 ADGRF2Q8IZF7 708 aa13.33□□□□□ -0.27
GPC3-201ENST00000370818 SLC2A14Q8TDB8 520 aa13.33□□□□□ -0.27
GPC3-201ENST00000370818 C9orf72Q96LT7 481 aa13.33□□□□□ -0.27
GPC3-201ENST00000370818 ADAM33Q9BZ11 813 aa13.33□□□□□ -0.27
GPC3-201ENST00000370818 FOXP3Q9BZS1 431 aa13.33□□□□□ -0.27
GPC3-201ENST00000370818 CCDC134Q9H6E4 229 aa13.33□□□□□ -0.27
GPC3-201ENST00000370818 ST3GAL5Q9UNP4 418 aa13.33□□□□□ -0.27
GPC3-201ENST00000370818 CEP350Q5VT06 3117 aa13.33□□□□□ -0.27
GPC3-201ENST00000370818 DCAF8L1A6NGE4 600 aa13.33□□□□□ -0.28
GPC3-201ENST00000370818 COQ9O75208 318 aa13.33□□□□□ -0.28
GPC3-201ENST00000370818 CHRNA1P02708 482 aa13.33□□□□□ -0.28
GPC3-201ENST00000370818 VIMP08670 466 aaKnown RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms