RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 NR2F2P24468 414 aa13.9□□□□□ -0.18
RPF1-201ENST00000370654 P2RY2P41231 377 aa13.9□□□□□ -0.18
RPF1-201ENST00000370654 TNFRSF4P43489 277 aa13.9□□□□□ -0.18
RPF1-201ENST00000370654 INCA1Q0VD86 236 aa13.9□□□□□ -0.18
RPF1-201ENST00000370654 ANO4Q32M45 955 aa13.9□□□□□ -0.18
RPF1-201ENST00000370654 MAP7D1Q3KQU3 841 aa13.9□□□□□ -0.18
RPF1-201ENST00000370654 ZCWPW2Q504Y3 356 aa13.9□□□□□ -0.18
RPF1-201ENST00000370654 RNF43Q68DV7 783 aa13.9□□□□□ -0.18
RPF1-201ENST00000370654 KRBA2Q6ZNG9 492 aa13.9□□□□□ -0.18
RPF1-201ENST00000370654 ARMCX6Q7L4S7 300 aa13.9□□□□□ -0.18
RPF1-201ENST00000370654 SCD5Q86SK9 330 aa13.9□□□□□ -0.18
RPF1-201ENST00000370654 TMEFF1Q8IYR6 380 aa13.9□□□□□ -0.18
RPF1-201ENST00000370654 HMGB4Q8WW32 186 aa13.9□□□□□ -0.18
RPF1-201ENST00000370654 TAF4BQ92750 862 aa13.9□□□□□ -0.18
RPF1-201ENST00000370654 CYFIP2Q96F07 1278 aa13.9□□□□□ -0.18
RPF1-201ENST00000370654 EDEM2Q9BV94 578 aa13.9□□□□□ -0.18
RPF1-201ENST00000370654 TMEM74BQ9NUR3 256 aa13.9□□□□□ -0.18
RPF1-201ENST00000370654 COMMD8Q9NX08 183 aa13.9□□□□□ -0.18
RPF1-201ENST00000370654 USP25Q9UHP3 1055 aa13.9□□□□□ -0.18
RPF1-201ENST00000370654 FRMD4BQ9Y2L6 1034 aa13.9□□□□□ -0.18
RPF1-201ENST00000370654 ACACBO00763 2458 aa13.9□□□□□ -0.18
RPF1-201ENST00000370654 TCRBV21S2A2A0A5A6 115 aa13.89□□□□□ -0.19
RPF1-201ENST00000370654 TBC1D3BA6NDS4 549 aa13.89□□□□□ -0.19
RPF1-201ENST00000370654 CDX4O14627 284 aaPredicted RBP13.89□□□□□ -0.19
RPF1-201ENST00000370654 CILPO75339 1184 aa13.89□□□□□ -0.19
RPF1-201ENST00000370654 KCNK5O95279 499 aa13.89□□□□□ -0.19
RPF1-201ENST00000370654 FAM200BP0CF97 657 aa13.89□□□□□ -0.19
RPF1-201ENST00000370654 ACO1P21399 889 aaKnown RBP13.89□□□□□ -0.19
RPF1-201ENST00000370654 PMLP29590 882 aa13.89□□□□□ -0.19
RPF1-201ENST00000370654 PTGER3P43115 390 aa13.89□□□□□ -0.19
RPF1-201ENST00000370654 DHPSP49366 369 aaPredicted RBP13.89□□□□□ -0.19
RPF1-201ENST00000370654 KRT85P78386 507 aa13.89□□□□□ -0.19
RPF1-201ENST00000370654 IRX4P78413 519 aa13.89□□□□□ -0.19
RPF1-201ENST00000370654 ZNF394Q53GI3 561 aa13.89□□□□□ -0.19
RPF1-201ENST00000370654 PPP1R26Q5T8A7 1209 aaPredicted RBP13.89□□□□□ -0.19
RPF1-201ENST00000370654 EGFLAMQ63HQ2 1017 aa13.89□□□□□ -0.19
RPF1-201ENST00000370654 TPGS1Q6ZTW0 290 aa13.89□□□□□ -0.19
RPF1-201ENST00000370654 TOGARAM2Q6ZUX3 1019 aa13.89□□□□□ -0.19
RPF1-201ENST00000370654 HTR3DQ70Z44 454 aa13.89□□□□□ -0.19
RPF1-201ENST00000370654 FAM186BQ8IYM0 893 aa13.89□□□□□ -0.19
RPF1-201ENST00000370654 DEFB119Q8N690 84 aa13.89□□□□□ -0.19
RPF1-201ENST00000370654 OTUB2Q96DC9 234 aa13.89□□□□□ -0.19
RPF1-201ENST00000370654 NACA2Q9H009 215 aa13.89□□□□□ -0.19
RPF1-201ENST00000370654 CD248Q9HCU0 757 aa13.89□□□□□ -0.19
RPF1-201ENST00000370654 CD93Q9NPY3 652 aa13.89□□□□□ -0.19
RPF1-201ENST00000370654 CYLDQ9NQC7 956 aa13.89□□□□□ -0.19
RPF1-201ENST00000370654 FSCN3Q9NQT6 498 aa13.89□□□□□ -0.19
RPF1-201ENST00000370654 CIZ1Q9ULV3 898 aaPredicted RBP13.89□□□□□ -0.19
RPF1-201ENST00000370654 SCML2Q9UQR0 700 aa13.89□□□□□ -0.19
RPF1-201ENST00000370654 ATXN2Q99700 1313 aaKnown RBP13.88□□□□□ -0.19
RPF1-201ENST00000370654 TNRC6BQ9UPQ9 1833 aaKnown RBP13.88□□□□□ -0.19
RPF1-201ENST00000370654 PRRT4C9JH25 899 aa13.88□□□□□ -0.19
RPF1-201ENST00000370654 MAPK13O15264 365 aa13.88□□□□□ -0.19
RPF1-201ENST00000370654 KLKB1P03952 638 aa13.88□□□□□ -0.19
RPF1-201ENST00000370654 MYL1P05976 194 aa13.88□□□□□ -0.19
RPF1-201ENST00000370654 P4HA1P13674 534 aa13.88□□□□□ -0.19
RPF1-201ENST00000370654 GABRG2P18507 467 aa13.88□□□□□ -0.19
RPF1-201ENST00000370654 ADAM9Q13443 819 aa13.88□□□□□ -0.19
RPF1-201ENST00000370654 NFIL3Q16649 462 aa13.88□□□□□ -0.19
RPF1-201ENST00000370654 EOGTQ5NDL2 527 aa13.88□□□□□ -0.19
RPF1-201ENST00000370654 C10orf76Q5T2E6 689 aa13.88□□□□□ -0.19
RPF1-201ENST00000370654 KIAA1211LQ6NV74 962 aa13.88□□□□□ -0.19
RPF1-201ENST00000370654 ZNF513Q8N8E2 541 aaPredicted RBP13.88□□□□□ -0.19
RPF1-201ENST00000370654 TERB1Q8NA31 727 aa13.88□□□□□ -0.19
RPF1-201ENST00000370654 CCDC26Q8TAB7 109 aa13.88□□□□□ -0.19
RPF1-201ENST00000370654 PIGKQ92643 395 aa13.88□□□□□ -0.19
RPF1-201ENST00000370654 TATDN2Q93075 761 aa13.88□□□□□ -0.19
RPF1-201ENST00000370654 BHMTQ93088 406 aa13.88□□□□□ -0.19
RPF1-201ENST00000370654 ARID3AQ99856 593 aa13.88□□□□□ -0.19
RPF1-201ENST00000370654 DUSP9Q99956 384 aaKnown RBP13.88□□□□□ -0.19
RPF1-201ENST00000370654 NT5C1AQ9BXI3 368 aa13.88□□□□□ -0.19
RPF1-201ENST00000370654 NIF3L1Q9GZT8 377 aa13.88□□□□□ -0.19
RPF1-201ENST00000370654 SLC6A17Q9H1V8 727 aa13.88□□□□□ -0.19
RPF1-201ENST00000370654 FBXO44Q9H4M3 255 aa13.88□□□□□ -0.19
RPF1-201ENST00000370654 TLR8Q9NR97 1041 aaKnown RBP13.88□□□□□ -0.19
RPF1-201ENST00000370654 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.88□□□□□ -0.19
RPF1-201ENST00000370654 PLK2Q9NYY3 685 aa13.88□□□□□ -0.19
RPF1-201ENST00000370654 DEC1Q9P2X7 70 aa13.88□□□□□ -0.19
RPF1-201ENST00000370654 EPG5Q9HCE0 2579 aa13.88□□□□□ -0.19
RPF1-201ENST00000370654 A0A1W2PQF6 199 aa13.87□□□□□ -0.19
RPF1-201ENST00000370654 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.87□□□□□ -0.19
RPF1-201ENST00000370654 NEDD8-MDP1E9PL57 170 aa13.87□□□□□ -0.19
RPF1-201ENST00000370654 ZNF202O95125 648 aa13.87□□□□□ -0.19
RPF1-201ENST00000370654 CISD3P0C7P0 127 aa13.87□□□□□ -0.19
RPF1-201ENST00000370654 RARGP13631 454 aa13.87□□□□□ -0.19
RPF1-201ENST00000370654 ATP5C1P36542 298 aaKnown RBP13.87□□□□□ -0.19
RPF1-201ENST00000370654 KIF11P52732 1056 aa13.87□□□□□ -0.19
RPF1-201ENST00000370654 MCCD1P59942 119 aaPredicted RBP13.87□□□□□ -0.19
RPF1-201ENST00000370654 PSAPL1Q6NUJ1 521 aa13.87□□□□□ -0.19
RPF1-201ENST00000370654 Q6ZNB5 142 aa13.87□□□□□ -0.19
RPF1-201ENST00000370654 CYP2U1Q7Z449 544 aa13.87□□□□□ -0.19
RPF1-201ENST00000370654 GUF1Q8N442 669 aaKnown RBP13.87□□□□□ -0.19
RPF1-201ENST00000370654 CYP3A43Q9HB55 503 aa13.87□□□□□ -0.19
RPF1-201ENST00000370654 POLMQ9NP87 494 aaPredicted RBP13.87□□□□□ -0.19
RPF1-201ENST00000370654 DNAJC17Q9NVM6 304 aaKnown RBP13.87□□□□□ -0.19
RPF1-201ENST00000370654 BCCIPQ9P287 314 aaKnown RBP eCLIP13.87□□□□□ -0.19
RPF1-201ENST00000370654 RAD54BQ9Y620 910 aa13.87□□□□□ -0.19
RPF1-201ENST00000370654 MAP1BP46821 2468 aaKnown RBP13.87□□□□□ -0.19
RPF1-201ENST00000370654 CACNA1BQ00975 2339 aa13.87□□□□□ -0.19
RPF1-201ENST00000370654 KMT2BQ9UMN6 2715 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms