RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 YWHAEP62258 255 aaKnown RBP17.02■□□□□ 0.32
VMA21-202ENST00000370361 IL17RCQ8NAC3 791 aa17.02■□□□□ 0.32
VMA21-202ENST00000370361 KLF16Q9BXK1 252 aaPredicted RBP17.02■□□□□ 0.32
VMA21-202ENST00000370361 DUSP16Q9BY84 665 aa17.02■□□□□ 0.32
VMA21-202ENST00000370361 GOLPH3LQ9H4A5 285 aa17.02■□□□□ 0.32
VMA21-202ENST00000370361 APOBEC3GQ9HC16 384 aaKnown RBP17.02■□□□□ 0.32
VMA21-202ENST00000370361 CLIC5Q9NZA1 410 aa17.02■□□□□ 0.32
VMA21-202ENST00000370361 MARK1Q9P0L2 795 aa17.02■□□□□ 0.32
VMA21-202ENST00000370361 MAPK8IP1Q9UQF2 711 aa17.02■□□□□ 0.32
VMA21-202ENST00000370361 STARD13Q9Y3M8 1113 aa17.02■□□□□ 0.32
VMA21-202ENST00000370361 BCLAF3A2AJT9 711 aaKnown RBP17.01■□□□□ 0.31
VMA21-202ENST00000370361 DCDC2BA2VCK2 349 aa17.01■□□□□ 0.31
VMA21-202ENST00000370361 TBC1D3BA6NDS4 549 aa17.01■□□□□ 0.31
VMA21-202ENST00000370361 HHLA1C9JL84 531 aa17.01■□□□□ 0.31
VMA21-202ENST00000370361 ZBTB24O43167 697 aaPredicted RBP17.01■□□□□ 0.31
VMA21-202ENST00000370361 CACNG3O60359 315 aa17.01■□□□□ 0.31
VMA21-202ENST00000370361 ADRB1P08588 477 aa17.01■□□□□ 0.31
VMA21-202ENST00000370361 ACO1P21399 889 aaKnown RBP17.01■□□□□ 0.31
VMA21-202ENST00000370361 GBP1P32455 592 aa17.01■□□□□ 0.31
VMA21-202ENST00000370361 KIF11P52732 1056 aa17.01■□□□□ 0.31
VMA21-202ENST00000370361 NUCB2P80303 420 aa17.01■□□□□ 0.31
VMA21-202ENST00000370361 FKBP3Q00688 224 aaKnown RBP17.01■□□□□ 0.31
VMA21-202ENST00000370361 LRRC63Q05C16 580 aa17.01■□□□□ 0.31
VMA21-202ENST00000370361 ZNF658Q5TYW1 1059 aaPredicted RBP17.01■□□□□ 0.31
VMA21-202ENST00000370361 PMS2CLQ68D20 193 aa17.01■□□□□ 0.31
VMA21-202ENST00000370361 ANO7Q6IWH7 933 aa17.01■□□□□ 0.31
VMA21-202ENST00000370361 BBS7Q8IWZ6 715 aa17.01■□□□□ 0.31
VMA21-202ENST00000370361 PHTF2Q8N3S3 785 aa17.01■□□□□ 0.31
VMA21-202ENST00000370361 TERB1Q8NA31 727 aa17.01■□□□□ 0.31
VMA21-202ENST00000370361 OLIG1Q8TAK6 271 aa17.01■□□□□ 0.31
VMA21-202ENST00000370361 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.01■□□□□ 0.31
VMA21-202ENST00000370361 RAB20Q9NX57 234 aa17.01■□□□□ 0.31
VMA21-202ENST00000370361 NCOR2Q9Y618 2525 aa17.01■□□□□ 0.31
VMA21-202ENST00000370361 TULP3O75386 442 aa17■□□□□ 0.31
VMA21-202ENST00000370361 KLF8O95600 359 aaPredicted RBP17■□□□□ 0.31
VMA21-202ENST00000370361 CAVIN2O95810 425 aa17■□□□□ 0.31
VMA21-202ENST00000370361 SLC6A11P48066 632 aa17■□□□□ 0.31
VMA21-202ENST00000370361 COG7P83436 770 aa17■□□□□ 0.31
VMA21-202ENST00000370361 ORC1Q13415 861 aa17■□□□□ 0.31
VMA21-202ENST00000370361 ANO4Q32M45 955 aa17■□□□□ 0.31
VMA21-202ENST00000370361 PPM1JQ5JR12 505 aa17■□□□□ 0.31
VMA21-202ENST00000370361 C12orf40Q86WS4 652 aa17■□□□□ 0.31
VMA21-202ENST00000370361 ELOA2Q8IYF1 753 aaPredicted RBP17■□□□□ 0.31
VMA21-202ENST00000370361 FMR1NBQ8N0W7 255 aaPredicted RBP17■□□□□ 0.31
VMA21-202ENST00000370361 CCDC33Q8N5R6 958 aa17■□□□□ 0.31
VMA21-202ENST00000370361 ALLCQ8N6M5 410 aa17■□□□□ 0.31
VMA21-202ENST00000370361 TXNDC5Q8NBS9 432 aaKnown RBP17■□□□□ 0.31
VMA21-202ENST00000370361 MDGA1Q8NFP4 955 aa17■□□□□ 0.31
VMA21-202ENST00000370361 TIGD1Q96MW7 591 aa17■□□□□ 0.31
VMA21-202ENST00000370361 TWNKQ96RR1 684 aa17■□□□□ 0.31
VMA21-202ENST00000370361 DCLK3Q9C098 648 aa17■□□□□ 0.31
VMA21-202ENST00000370361 USP3Q9Y6I4 520 aa17■□□□□ 0.31
VMA21-202ENST00000370361 NPC1O15118 1278 aa16.99■□□□□ 0.31
VMA21-202ENST00000370361 CYP26A1O43174 497 aa16.99■□□□□ 0.31
VMA21-202ENST00000370361 CHRM1P11229 460 aaPredicted RBP16.99■□□□□ 0.31
VMA21-202ENST00000370361 RARGP13631 454 aa16.99■□□□□ 0.31
VMA21-202ENST00000370361 CD58P19256 250 aa16.99■□□□□ 0.31
VMA21-202ENST00000370361 HOXD12P35452 270 aa16.99■□□□□ 0.31
VMA21-202ENST00000370361 TIE1P35590 1138 aa16.99■□□□□ 0.31
VMA21-202ENST00000370361 CHKAP35790 457 aa16.99■□□□□ 0.31
VMA21-202ENST00000370361 CREB5Q02930 508 aa16.99■□□□□ 0.31
VMA21-202ENST00000370361 KDSRQ06136 332 aa16.99■□□□□ 0.31
VMA21-202ENST00000370361 STIM1Q13586 685 aa16.99■□□□□ 0.31
VMA21-202ENST00000370361 SF3A2Q15428 464 aaKnown RBP16.99■□□□□ 0.31
VMA21-202ENST00000370361 ARHGAP17Q68EM7 881 aa16.99■□□□□ 0.31
VMA21-202ENST00000370361 GRAMD4Q6IC98 578 aa16.99■□□□□ 0.31
VMA21-202ENST00000370361 SDE2Q6IQ49 451 aa16.99■□□□□ 0.31
VMA21-202ENST00000370361 ZC3H3Q8IXZ2 948 aaKnown RBP16.99■□□□□ 0.31
VMA21-202ENST00000370361 ZNF513Q8N8E2 541 aaPredicted RBP16.99■□□□□ 0.31
VMA21-202ENST00000370361 TMEM176AQ96HP8 235 aa16.99■□□□□ 0.31
VMA21-202ENST00000370361 HEXIM2Q96MH2 286 aaKnown RBP16.99■□□□□ 0.31
VMA21-202ENST00000370361 MMRN2Q9H8L6 949 aa16.99■□□□□ 0.31
VMA21-202ENST00000370361 METTL14Q9HCE5 456 aaKnown RBP16.99■□□□□ 0.31
VMA21-202ENST00000370361 CISHQ9NSE2 258 aa16.99■□□□□ 0.31
VMA21-202ENST00000370361 BCCIPQ9P287 314 aaKnown RBP eCLIP16.99■□□□□ 0.31
VMA21-202ENST00000370361 COQ4Q9Y3A0 265 aa16.99■□□□□ 0.31
VMA21-202ENST00000370361 PLXND1Q9Y4D7 1925 aa16.98■□□□□ 0.31
VMA21-202ENST00000370361 SGK1O00141 431 aa16.98■□□□□ 0.31
VMA21-202ENST00000370361 GDF9O60383 454 aa16.98■□□□□ 0.31
VMA21-202ENST00000370361 GREM1O60565 184 aa16.98■□□□□ 0.31
VMA21-202ENST00000370361 IRF1P10914 325 aa16.98■□□□□ 0.31
VMA21-202ENST00000370361 HOXC13P31276 330 aa16.98■□□□□ 0.31
VMA21-202ENST00000370361 P2RY2P41231 377 aa16.98■□□□□ 0.31
VMA21-202ENST00000370361 C10orf120Q5SQS8 335 aa16.98■□□□□ 0.31
VMA21-202ENST00000370361 C10orf76Q5T2E6 689 aa16.98■□□□□ 0.31
VMA21-202ENST00000370361 PPP1R26Q5T8A7 1209 aaPredicted RBP16.98■□□□□ 0.31
VMA21-202ENST00000370361 STPG1Q5TH74 334 aa16.98■□□□□ 0.31
VMA21-202ENST00000370361 LPCAT2Q7L5N7 544 aa16.98■□□□□ 0.31
VMA21-202ENST00000370361 GPRIN1Q7Z2K8 1008 aa16.98■□□□□ 0.31
VMA21-202ENST00000370361 CYP2U1Q7Z449 544 aa16.98■□□□□ 0.31
VMA21-202ENST00000370361 TMEM25Q86YD3 366 aa16.98■□□□□ 0.31
VMA21-202ENST00000370361 SPATA20Q8TB22 786 aa16.98■□□□□ 0.31
VMA21-202ENST00000370361 SMARCE1Q969G3 411 aa16.98■□□□□ 0.31
VMA21-202ENST00000370361 ELMO3Q96BJ8 720 aa16.98■□□□□ 0.31
VMA21-202ENST00000370361 BBS2Q9BXC9 721 aa16.98■□□□□ 0.31
VMA21-202ENST00000370361 GDPD2Q9HCC8 539 aa16.98■□□□□ 0.31
VMA21-202ENST00000370361 DNAJC17Q9NVM6 304 aaKnown RBP16.98■□□□□ 0.31
VMA21-202ENST00000370361 POLR3BQ9NW08 1133 aaPredicted RBP16.98■□□□□ 0.31
VMA21-202ENST00000370361 NAGPAQ9UK23 515 aa16.98■□□□□ 0.31
VMA21-202ENST00000370361 KIAA1257Q9ULG3 409 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms