RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 OR6B2Q6IFH4 312 aa16.29■□□□□ 0.2
PRPF38B-202ENST00000370022 OLFML1Q6UWY5 402 aa16.29■□□□□ 0.2
PRPF38B-202ENST00000370022 MMS22LQ6ZRQ5 1243 aa16.29■□□□□ 0.2
PRPF38B-202ENST00000370022 SPC24Q8NBT2 197 aa16.29■□□□□ 0.2
PRPF38B-202ENST00000370022 NXPE3Q969Y0 559 aa16.29■□□□□ 0.2
PRPF38B-202ENST00000370022 CCDC42Q96M95 316 aa16.29■□□□□ 0.2
PRPF38B-202ENST00000370022 ZSWIM3Q96MP5 696 aa16.29■□□□□ 0.2
PRPF38B-202ENST00000370022 NACA2Q9H009 215 aa16.29■□□□□ 0.2
PRPF38B-202ENST00000370022 OSER1Q9NX31 292 aa16.29■□□□□ 0.2
PRPF38B-202ENST00000370022 TJP2Q9UDY2 1190 aa16.29■□□□□ 0.2
PRPF38B-202ENST00000370022 PRUNE2Q8WUY3 3088 aa16.29■□□□□ 0.2
PRPF38B-202ENST00000370022 ZNF638Q14966 1978 aaKnown RBP16.28■□□□□ 0.2
PRPF38B-202ENST00000370022 HSF2BPO75031 334 aa16.28■□□□□ 0.2
PRPF38B-202ENST00000370022 CKMP06732 381 aa16.28■□□□□ 0.2
PRPF38B-202ENST00000370022 EIF4A3P38919 411 aaKnown RBP16.28■□□□□ 0.2
PRPF38B-202ENST00000370022 YWHAZP63104 245 aaKnown RBP16.28■□□□□ 0.2
PRPF38B-202ENST00000370022 SLC7A9P82251 487 aa16.28■□□□□ 0.2
PRPF38B-202ENST00000370022 SLC18A3Q16572 532 aa16.28■□□□□ 0.2
PRPF38B-202ENST00000370022 FAM78AQ5JUQ0 283 aa16.28■□□□□ 0.2
PRPF38B-202ENST00000370022 FAM183BPQ6ZVS7 135 aa16.28■□□□□ 0.2
PRPF38B-202ENST00000370022 MON1BQ7L1V2 547 aa16.28■□□□□ 0.2
PRPF38B-202ENST00000370022 RSRC2Q7L4I2 434 aaKnown RBP16.28■□□□□ 0.2
PRPF38B-202ENST00000370022 SLC26A9Q7LBE3 791 aa16.28■□□□□ 0.2
PRPF38B-202ENST00000370022 XYLT1Q86Y38 959 aa16.28■□□□□ 0.2
PRPF38B-202ENST00000370022 ARL14EPQ8N8R7 260 aaPredicted RBP16.28■□□□□ 0.2
PRPF38B-202ENST00000370022 CLEC4CQ8WTT0 213 aa16.28■□□□□ 0.2
PRPF38B-202ENST00000370022 NDRG1Q92597 394 aaKnown RBP16.28■□□□□ 0.2
PRPF38B-202ENST00000370022 TRIM11Q96F44 468 aa16.28■□□□□ 0.2
PRPF38B-202ENST00000370022 C11orf70Q9BRQ4 267 aa16.28■□□□□ 0.2
PRPF38B-202ENST00000370022 ISCUQ9H1K1 167 aa16.28■□□□□ 0.2
PRPF38B-202ENST00000370022 CCSER2Q9H7U1 834 aa16.28■□□□□ 0.2
PRPF38B-202ENST00000370022 NHEJ1Q9H9Q4 299 aaPredicted RBP16.28■□□□□ 0.2
PRPF38B-202ENST00000370022 KIF9Q9HAQ2 790 aa16.28■□□□□ 0.2
PRPF38B-202ENST00000370022 POPDC2Q9HBU9 364 aa16.28■□□□□ 0.2
PRPF38B-202ENST00000370022 OBP2AQ9NY56 170 aa16.28■□□□□ 0.2
PRPF38B-202ENST00000370022 OBSL1O75147 1896 aa16.27■□□□□ 0.2
PRPF38B-202ENST00000370022 MYO16Q9Y6X6 1858 aa16.27■□□□□ 0.2
PRPF38B-202ENST00000370022 A0A087X0T9 212 aa16.27■□□□□ 0.2
PRPF38B-202ENST00000370022 C19orf67A6NJJ6 358 aa16.27■□□□□ 0.2
PRPF38B-202ENST00000370022 ANHXE9PGG2 379 aa16.27■□□□□ 0.2
PRPF38B-202ENST00000370022 COCHO43405 550 aa16.27■□□□□ 0.2
PRPF38B-202ENST00000370022 FAM228BP0C875 321 aa16.27■□□□□ 0.2
PRPF38B-202ENST00000370022 FECHP22830 423 aa16.27■□□□□ 0.2
PRPF38B-202ENST00000370022 SP100P23497 879 aaPredicted RBP16.27■□□□□ 0.2
PRPF38B-202ENST00000370022 PGFP49763 221 aa16.27■□□□□ 0.2
PRPF38B-202ENST00000370022 PTP4A2Q12974 167 aa16.27■□□□□ 0.2
PRPF38B-202ENST00000370022 ASTE1Q2TB18 679 aaPredicted RBP16.27■□□□□ 0.2
PRPF38B-202ENST00000370022 ARCQ7LC44 396 aa16.27■□□□□ 0.2
PRPF38B-202ENST00000370022 ARID3BQ8IVW6 561 aaPredicted RBP16.27■□□□□ 0.2
PRPF38B-202ENST00000370022 MCOLN2Q8IZK6 566 aa16.27■□□□□ 0.2
PRPF38B-202ENST00000370022 CELF5Q8N6W0 485 aaKnown RBP16.27■□□□□ 0.2
PRPF38B-202ENST00000370022 RNF139Q8WU17 664 aa16.27■□□□□ 0.2
PRPF38B-202ENST00000370022 FAM149B1Q96BN6 582 aa16.27■□□□□ 0.2
PRPF38B-202ENST00000370022 CHP1Q99653 195 aa16.27■□□□□ 0.2
PRPF38B-202ENST00000370022 ZFP14Q9HCL3 533 aa16.27■□□□□ 0.2
PRPF38B-202ENST00000370022 TDP1Q9NUW8 608 aa16.27■□□□□ 0.2
PRPF38B-202ENST00000370022 IGSF9Q9P2J2 1179 aa16.27■□□□□ 0.2
PRPF38B-202ENST00000370022 DNMT3LQ9UJW3 386 aa16.27■□□□□ 0.2
PRPF38B-202ENST00000370022 ARHGAP26Q9UNA1 814 aa16.27■□□□□ 0.2
PRPF38B-202ENST00000370022 DOCK6Q96HP0 2047 aa16.27■□□□□ 0.2
PRPF38B-202ENST00000370022 VCANP13611 3396 aa16.26■□□□□ 0.19
PRPF38B-202ENST00000370022 CAPN9O14815 690 aa16.26■□□□□ 0.19
PRPF38B-202ENST00000370022 AKR1B10O60218 316 aa16.26■□□□□ 0.19
PRPF38B-202ENST00000370022 ECI2O75521 394 aa16.26■□□□□ 0.19
PRPF38B-202ENST00000370022 FTLP02792 175 aaPredicted RBP16.26■□□□□ 0.19
PRPF38B-202ENST00000370022 MYBL1P10243 752 aa16.26■□□□□ 0.19
PRPF38B-202ENST00000370022 TCF3P15923 654 aa16.26■□□□□ 0.19
PRPF38B-202ENST00000370022 C10orf120Q5SQS8 335 aa16.26■□□□□ 0.19
PRPF38B-202ENST00000370022 FAM102AQ5T9C2 384 aaPredicted RBP16.26■□□□□ 0.19
PRPF38B-202ENST00000370022 ALKBH5Q6P6C2 394 aaKnown RBP16.26■□□□□ 0.19
PRPF38B-202ENST00000370022 POTEHQ6S545 545 aa16.26■□□□□ 0.19
PRPF38B-202ENST00000370022 HFE2Q6ZVN8 426 aa16.26■□□□□ 0.19
PRPF38B-202ENST00000370022 DDX42Q86XP3 938 aaKnown RBP eCLIP16.26■□□□□ 0.19
PRPF38B-202ENST00000370022 TMTC1Q8IUR5 882 aa16.26■□□□□ 0.19
PRPF38B-202ENST00000370022 CCDC170Q8IYT3 715 aa16.26■□□□□ 0.19
PRPF38B-202ENST00000370022 ELSPBP1Q96BH3 223 aa16.26■□□□□ 0.19
PRPF38B-202ENST00000370022 CYP2S1Q96SQ9 504 aa16.26■□□□□ 0.19
PRPF38B-202ENST00000370022 RNF38Q9H0F5 515 aa16.26■□□□□ 0.19
PRPF38B-202ENST00000370022 TAS2R14Q9NYV8 317 aa16.26■□□□□ 0.19
PRPF38B-202ENST00000370022 DENND4CQ5VZ89 1909 aa16.26■□□□□ 0.19
PRPF38B-202ENST00000370022 TMCO5BA8MYB1 307 aa16.26■□□□□ 0.19
PRPF38B-202ENST00000370022 DPYSL4O14531 572 aa16.26■□□□□ 0.19
PRPF38B-202ENST00000370022 MBL2P11226 248 aaPredicted RBP16.26■□□□□ 0.19
PRPF38B-202ENST00000370022 NCAM1P13591 858 aa16.26■□□□□ 0.19
PRPF38B-202ENST00000370022 KIAA1958Q8N8K9 716 aa16.26■□□□□ 0.19
PRPF38B-202ENST00000370022 C3orf20Q8ND61 904 aa16.26■□□□□ 0.19
PRPF38B-202ENST00000370022 EDEM1Q92611 657 aa16.26■□□□□ 0.19
PRPF38B-202ENST00000370022 PIWIL1Q96J94 861 aaKnown RBP16.26■□□□□ 0.19
PRPF38B-202ENST00000370022 SLC2A13Q96QE2 648 aa16.26■□□□□ 0.19
PRPF38B-202ENST00000370022 SLC22A12Q96S37 553 aa16.26■□□□□ 0.19
PRPF38B-202ENST00000370022 RRN3Q9NYV6 651 aa16.26■□□□□ 0.19
PRPF38B-202ENST00000370022 DAB1O75553 588 aa16.25■□□□□ 0.19
PRPF38B-202ENST00000370022 FCARP24071 287 aa16.25■□□□□ 0.19
PRPF38B-202ENST00000370022 DEKP35659 375 aaKnown RBP16.25■□□□□ 0.19
PRPF38B-202ENST00000370022 GFPT1Q06210 699 aaPredicted RBP16.25■□□□□ 0.19
PRPF38B-202ENST00000370022 HTR4Q13639 388 aa16.25■□□□□ 0.19
PRPF38B-202ENST00000370022 C2CD6Q53TS8 623 aa16.25■□□□□ 0.19
PRPF38B-202ENST00000370022 CCDC122Q5T0U0 273 aa16.25■□□□□ 0.19
PRPF38B-202ENST00000370022 MSANTD2Q6P1R3 559 aa16.25■□□□□ 0.19
PRPF38B-202ENST00000370022 PARM1Q6UWI2 310 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms