RNA–Protein interactions for RNA: ENST00000370021.1

PRPF38B-201, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 3,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-201ENST00000370021 CNTNAP2Q9UHC6 1331 aa10.79□□□□□ -0.68
PRPF38B-201ENST00000370021 ITM2AO43736 263 aa10.79□□□□□ -0.68
PRPF38B-201ENST00000370021 CALB1P05937 261 aa10.79□□□□□ -0.68
PRPF38B-201ENST00000370021 ARL1P40616 181 aaPredicted RBP10.79□□□□□ -0.68
PRPF38B-201ENST00000370021 GK3PQ14409 553 aa10.79□□□□□ -0.68
PRPF38B-201ENST00000370021 PPM1JQ5JR12 505 aa10.79□□□□□ -0.68
PRPF38B-201ENST00000370021 C1orf220Q5T0J3 134 aa10.79□□□□□ -0.68
PRPF38B-201ENST00000370021 LPCAT2Q7L5N7 544 aa10.79□□□□□ -0.68
PRPF38B-201ENST00000370021 AMIGO3Q86WK7 504 aa10.79□□□□□ -0.68
PRPF38B-201ENST00000370021 STKLD1Q8NE28 680 aa10.79□□□□□ -0.68
PRPF38B-201ENST00000370021 OR5B17Q8NGF7 314 aa10.79□□□□□ -0.68
PRPF38B-201ENST00000370021 TAAR1Q96RJ0 339 aa10.79□□□□□ -0.68
PRPF38B-201ENST00000370021 WDR55Q9H6Y2 383 aaPredicted RBP10.79□□□□□ -0.68
PRPF38B-201ENST00000370021 NYAP2Q9P242 653 aa10.79□□□□□ -0.68
PRPF38B-201ENST00000370021 FBXO40Q9UH90 709 aa10.79□□□□□ -0.68
PRPF38B-201ENST00000370021 AP4B1Q9Y6B7 739 aa10.79□□□□□ -0.68
PRPF38B-201ENST00000370021 BOLA2-SMG1P6H3BVE0 249 aa10.78□□□□□ -0.68
PRPF38B-201ENST00000370021 FUT4P22083 530 aa10.78□□□□□ -0.68
PRPF38B-201ENST00000370021 TM4SF1P30408 202 aa10.78□□□□□ -0.68
PRPF38B-201ENST00000370021 HADHBP55084 474 aaKnown RBP10.78□□□□□ -0.68
PRPF38B-201ENST00000370021 MYL6P60660 151 aa10.78□□□□□ -0.68
PRPF38B-201ENST00000370021 ESRRGP62508 458 aa10.78□□□□□ -0.68
PRPF38B-201ENST00000370021 MYBPC3Q14896 1274 aa10.78□□□□□ -0.68
PRPF38B-201ENST00000370021 ADGRD1Q6QNK2 874 aa10.78□□□□□ -0.68
PRPF38B-201ENST00000370021 RNF135Q8IUD6 432 aa10.78□□□□□ -0.68
PRPF38B-201ENST00000370021 SNX31Q8N9S9 440 aa10.78□□□□□ -0.68
PRPF38B-201ENST00000370021 CNKSR2Q8WXI2 1034 aa10.78□□□□□ -0.68
PRPF38B-201ENST00000370021 CMTM5Q96DZ9 223 aa10.78□□□□□ -0.68
PRPF38B-201ENST00000370021 CATSPER2Q96P56 530 aa10.78□□□□□ -0.68
PRPF38B-201ENST00000370021 MTMR12Q9C0I1 747 aa10.78□□□□□ -0.68
PRPF38B-201ENST00000370021 MRPL46Q9H2W6 279 aaKnown RBP10.78□□□□□ -0.68
PRPF38B-201ENST00000370021 KCNK4Q9NYG8 393 aa10.78□□□□□ -0.68
PRPF38B-201ENST00000370021 RBMX2Q9Y388 322 aaKnown RBP10.78□□□□□ -0.68
PRPF38B-201ENST00000370021 NUB1Q9Y5A7 615 aa10.78□□□□□ -0.68
PRPF38B-201ENST00000370021 hCG_1818297A0A087WSY0 165 aa10.78□□□□□ -0.68
PRPF38B-201ENST00000370021 MAGEB2O15479 319 aa10.78□□□□□ -0.68
PRPF38B-201ENST00000370021 ATP9BO43861 1147 aa10.78□□□□□ -0.68
PRPF38B-201ENST00000370021 TCEA3O75764 348 aa10.78□□□□□ -0.68
PRPF38B-201ENST00000370021 KRT7P08729 469 aa10.78□□□□□ -0.68
PRPF38B-201ENST00000370021 PDGFRAP16234 1089 aa10.78□□□□□ -0.68
PRPF38B-201ENST00000370021 TFE3P19532 575 aaPredicted RBP10.78□□□□□ -0.68
PRPF38B-201ENST00000370021 NOMO3P69849 1222 aa10.78□□□□□ -0.68
PRPF38B-201ENST00000370021 ZC3H12AQ5D1E8 599 aaKnown RBP10.78□□□□□ -0.68
PRPF38B-201ENST00000370021 IFNEQ86WN2 208 aa10.78□□□□□ -0.68
PRPF38B-201ENST00000370021 SNX32Q86XE0 403 aa10.78□□□□□ -0.68
PRPF38B-201ENST00000370021 CLVS1Q8IUQ0 354 aaPredicted RBP10.78□□□□□ -0.68
PRPF38B-201ENST00000370021 ZNF786Q8N393 782 aa10.78□□□□□ -0.68
PRPF38B-201ENST00000370021 TTC13Q8NBP0 860 aa10.78□□□□□ -0.68
PRPF38B-201ENST00000370021 CDKL2Q92772 493 aa10.78□□□□□ -0.68
PRPF38B-201ENST00000370021 FAM210AQ96ND0 272 aa10.78□□□□□ -0.68
PRPF38B-201ENST00000370021 CYLDQ9NQC7 956 aa10.78□□□□□ -0.68
PRPF38B-201ENST00000370021 ZNF358Q9NW07 568 aa10.78□□□□□ -0.68
PRPF38B-201ENST00000370021 STRCQ7RTU9 1775 aa10.78□□□□□ -0.68
PRPF38B-201ENST00000370021 IGLV3-22A0A075B6J6 115 aa10.78□□□□□ -0.68
PRPF38B-201ENST00000370021 RNF103-CHMP3A0A140T963 221 aa10.78□□□□□ -0.68
PRPF38B-201ENST00000370021 INO80B-WBP1J3KQ70 363 aa10.78□□□□□ -0.68
PRPF38B-201ENST00000370021 M0QYV0 167 aa10.78□□□□□ -0.68
PRPF38B-201ENST00000370021 RBL1P28749 1068 aa10.78□□□□□ -0.68
PRPF38B-201ENST00000370021 RGS2P41220 211 aa10.78□□□□□ -0.68
PRPF38B-201ENST00000370021 CASP2P42575 452 aa10.78□□□□□ -0.68
PRPF38B-201ENST00000370021 RPL5P46777 297 aaKnown RBP10.78□□□□□ -0.68
PRPF38B-201ENST00000370021 SERPINB8P50452 374 aa10.78□□□□□ -0.68
PRPF38B-201ENST00000370021 SH3BGRP55822 239 aaPredicted RBP10.78□□□□□ -0.68
PRPF38B-201ENST00000370021 GABPAQ06546 454 aa10.78□□□□□ -0.68
PRPF38B-201ENST00000370021 PRKD1Q15139 912 aaPredicted RBP10.78□□□□□ -0.68
PRPF38B-201ENST00000370021 TDRD10Q5VZ19 366 aaKnown RBP10.78□□□□□ -0.68
PRPF38B-201ENST00000370021 CC2D2BQ6DHV5 1058 aa10.78□□□□□ -0.68
PRPF38B-201ENST00000370021 PPP1R2P3Q6NXS1 205 aa10.78□□□□□ -0.68
PRPF38B-201ENST00000370021 KLC3Q6P597 504 aa10.78□□□□□ -0.68
PRPF38B-201ENST00000370021 MOXD1Q6UVY6 613 aa10.78□□□□□ -0.68
PRPF38B-201ENST00000370021 PCDH20Q8N6Y1 951 aaKnown RBP10.78□□□□□ -0.68
PRPF38B-201ENST00000370021 WRNIP1Q96S55 665 aa10.78□□□□□ -0.68
PRPF38B-201ENST00000370021 INO80BQ9C086 356 aaPredicted RBP10.78□□□□□ -0.68
PRPF38B-201ENST00000370021 CACNA1SQ13698 1873 aa10.77□□□□□ -0.68
PRPF38B-201ENST00000370021 SCN7AQ01118 1682 aa10.77□□□□□ -0.68
PRPF38B-201ENST00000370021 STX16-NPEPL1H3BU86 382 aa10.77□□□□□ -0.69
PRPF38B-201ENST00000370021 ECE2O60344 883 aa10.77□□□□□ -0.69
PRPF38B-201ENST00000370021 NOL3O60936 208 aaKnown RBP10.77□□□□□ -0.69
PRPF38B-201ENST00000370021 USP12O75317 370 aa10.77□□□□□ -0.69
PRPF38B-201ENST00000370021 BBOX1O75936 387 aa10.77□□□□□ -0.69
PRPF38B-201ENST00000370021 KLHL2O95198 593 aa10.77□□□□□ -0.69
PRPF38B-201ENST00000370021 UNGP13051 313 aaPredicted RBP10.77□□□□□ -0.69
PRPF38B-201ENST00000370021 TPD52P55327 224 aaPredicted RBP10.77□□□□□ -0.69
PRPF38B-201ENST00000370021 NME5P56597 212 aa10.77□□□□□ -0.69
PRPF38B-201ENST00000370021 DCTN2Q13561 401 aaKnown RBP10.77□□□□□ -0.69
PRPF38B-201ENST00000370021 CTC1Q2NKJ3 1217 aa10.77□□□□□ -0.69
PRPF38B-201ENST00000370021 C15orf59Q2T9L4 293 aaPredicted RBP10.77□□□□□ -0.69
PRPF38B-201ENST00000370021 ANKRD20A4Q4UJ75 823 aa10.77□□□□□ -0.69
PRPF38B-201ENST00000370021 KLHDC10Q6PID8 442 aa10.77□□□□□ -0.69
PRPF38B-201ENST00000370021 ACAD11Q709F0 780 aa10.77□□□□□ -0.69
PRPF38B-201ENST00000370021 KDELC2Q7Z4H8 507 aa10.77□□□□□ -0.69
PRPF38B-201ENST00000370021 BSNDQ8WZ55 320 aa10.77□□□□□ -0.69
PRPF38B-201ENST00000370021 FIZ1Q96SL8 496 aa10.77□□□□□ -0.69
PRPF38B-201ENST00000370021 SERPINI1Q99574 410 aa10.77□□□□□ -0.69
PRPF38B-201ENST00000370021 APOL2Q9BQE5 337 aa10.77□□□□□ -0.69
PRPF38B-201ENST00000370021 ZNF341Q9BYN7 854 aa10.77□□□□□ -0.69
PRPF38B-201ENST00000370021 GLIS2Q9BZE0 524 aaPredicted RBP10.77□□□□□ -0.69
PRPF38B-201ENST00000370021 KCNK13Q9HB14 408 aa10.77□□□□□ -0.69
PRPF38B-201ENST00000370021 FAM49BQ9NUQ9 324 aa10.77□□□□□ -0.69
PRPF38B-201ENST00000370021 ROBO1Q9Y6N7 1651 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms