RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 TCRBV5S1A1TA0A578 114 aa12.76□□□□□ -0.37
PHGDH-201ENST00000369407 RBM47A0AV96 593 aaKnown RBP12.76□□□□□ -0.37
PHGDH-201ENST00000369407 LRRIQ4A6NIV6 560 aa12.76□□□□□ -0.37
PHGDH-201ENST00000369407 MCF2LO15068 1137 aa12.76□□□□□ -0.37
PHGDH-201ENST00000369407 EDN1P05305 212 aa12.76□□□□□ -0.37
PHGDH-201ENST00000369407 APRTP07741 180 aa12.76□□□□□ -0.37
PHGDH-201ENST00000369407 SNRPAP09012 282 aaKnown RBP12.76□□□□□ -0.37
PHGDH-201ENST00000369407 KRT3P12035 628 aa12.76□□□□□ -0.37
PHGDH-201ENST00000369407 NCF2P19878 526 aaPredicted RBP12.76□□□□□ -0.37
PHGDH-201ENST00000369407 HSD17B4P51659 736 aa12.76□□□□□ -0.37
PHGDH-201ENST00000369407 MAP3K10Q02779 954 aa12.76□□□□□ -0.37
PHGDH-201ENST00000369407 STX3Q13277 289 aa12.76□□□□□ -0.37
PHGDH-201ENST00000369407 PIGHQ14442 188 aaPredicted RBP12.76□□□□□ -0.37
PHGDH-201ENST00000369407 TMCO4Q5TGY1 634 aa12.76□□□□□ -0.37
PHGDH-201ENST00000369407 RBM44Q6ZP01 1051 aaKnown RBP12.76□□□□□ -0.37
PHGDH-201ENST00000369407 ZBTB33Q86T24 672 aa12.76□□□□□ -0.37
PHGDH-201ENST00000369407 ZNF778Q96MU6 729 aa12.76□□□□□ -0.37
PHGDH-201ENST00000369407 HAPLN3Q96S86 360 aa12.76□□□□□ -0.37
PHGDH-201ENST00000369407 MSTO1Q9BUK6 570 aa12.76□□□□□ -0.37
PHGDH-201ENST00000369407 DDX56Q9NY93 547 aaKnown RBP12.76□□□□□ -0.37
PHGDH-201ENST00000369407 TTLL13PA6NNM8 815 aa12.75□□□□□ -0.37
PHGDH-201ENST00000369407 H0YIN7 160 aa12.75□□□□□ -0.37
PHGDH-201ENST00000369407 CALB1P05937 261 aa12.75□□□□□ -0.37
PHGDH-201ENST00000369407 F7P08709 466 aaPredicted RBP12.75□□□□□ -0.37
PHGDH-201ENST00000369407 DESP17661 470 aa12.75□□□□□ -0.37
PHGDH-201ENST00000369407 TNFSF9P41273 254 aa12.75□□□□□ -0.37
PHGDH-201ENST00000369407 MYL6P60660 151 aa12.75□□□□□ -0.37
PHGDH-201ENST00000369407 PTPN20Q4JDL3 420 aa12.75□□□□□ -0.37
PHGDH-201ENST00000369407 LRRC38Q5VT99 294 aa12.75□□□□□ -0.37
PHGDH-201ENST00000369407 ATG14Q6ZNE5 492 aa12.75□□□□□ -0.37
PHGDH-201ENST00000369407 BBS12Q6ZW61 710 aa12.75□□□□□ -0.37
PHGDH-201ENST00000369407 DEFB107AQ8IZN7 70 aa12.75□□□□□ -0.37
PHGDH-201ENST00000369407 AGR3Q8TD06 166 aa12.75□□□□□ -0.37
PHGDH-201ENST00000369407 C7orf26Q96N11 449 aa12.75□□□□□ -0.37
PHGDH-201ENST00000369407 PNPOQ9NVS9 261 aa12.75□□□□□ -0.37
PHGDH-201ENST00000369407 FBXO40Q9UH90 709 aa12.75□□□□□ -0.37
PHGDH-201ENST00000369407 CYTH4Q9UIA0 394 aa12.75□□□□□ -0.37
PHGDH-201ENST00000369407 ZNF711Q9Y462 761 aa12.75□□□□□ -0.37
PHGDH-201ENST00000369407 HEY1Q9Y5J3 304 aa12.75□□□□□ -0.37
PHGDH-201ENST00000369407 KRT37O76014 449 aa12.75□□□□□ -0.37
PHGDH-201ENST00000369407 LYPLA2O95372 231 aa12.75□□□□□ -0.37
PHGDH-201ENST00000369407 GARTP22102 1010 aa12.75□□□□□ -0.37
PHGDH-201ENST00000369407 RAP1GAPP47736 663 aa12.75□□□□□ -0.37
PHGDH-201ENST00000369407 YWHAZP63104 245 aaKnown RBP12.75□□□□□ -0.37
PHGDH-201ENST00000369407 FOLH1Q04609 750 aa12.75□□□□□ -0.37
PHGDH-201ENST00000369407 MPP5Q8N3R9 675 aa12.75□□□□□ -0.37
PHGDH-201ENST00000369407 SAMD3Q8N6K7 520 aa12.75□□□□□ -0.37
PHGDH-201ENST00000369407 TMEM35BQ8NCS4 154 aa12.75□□□□□ -0.37
PHGDH-201ENST00000369407 OLFM3Q96PB7 478 aa12.75□□□□□ -0.37
PHGDH-201ENST00000369407 RMDN3Q96TC7 470 aa12.75□□□□□ -0.37
PHGDH-201ENST00000369407 PLAC1Q9HBJ0 212 aa12.75□□□□□ -0.37
PHGDH-201ENST00000369407 XAB2Q9HCS7 855 aaKnown RBP12.75□□□□□ -0.37
PHGDH-201ENST00000369407 ACSS2Q9NR19 701 aa12.75□□□□□ -0.37
PHGDH-201ENST00000369407 MAN1C1Q9NR34 630 aa12.75□□□□□ -0.37
PHGDH-201ENST00000369407 TBC1D22BQ9NU19 505 aa12.75□□□□□ -0.37
PHGDH-201ENST00000369407 APPL1Q9UKG1 709 aa12.75□□□□□ -0.37
PHGDH-201ENST00000369407 POLIQ9UNA4 740 aa12.75□□□□□ -0.37
PHGDH-201ENST00000369407 PHF24Q9UPV7 400 aa12.75□□□□□ -0.37
PHGDH-201ENST00000369407 NR2E3Q9Y5X4 410 aa12.75□□□□□ -0.37
PHGDH-201ENST00000369407 SDR42E2A6NKP2 422 aa12.75□□□□□ -0.37
PHGDH-201ENST00000369407 SERPINA6P08185 405 aa12.75□□□□□ -0.37
PHGDH-201ENST00000369407 PABPC4LP0CB38 370 aaKnown RBP12.75□□□□□ -0.37
PHGDH-201ENST00000369407 PSMC1P62191 440 aaKnown RBP12.75□□□□□ -0.37
PHGDH-201ENST00000369407 PGM5Q15124 567 aa12.75□□□□□ -0.37
PHGDH-201ENST00000369407 CDO1Q16878 200 aa12.75□□□□□ -0.37
PHGDH-201ENST00000369407 NME8Q8N427 588 aa12.75□□□□□ -0.37
PHGDH-201ENST00000369407 PPP1R36Q96LQ0 422 aa12.75□□□□□ -0.37
PHGDH-201ENST00000369407 GRIP2Q9C0E4 1043 aa12.75□□□□□ -0.37
PHGDH-201ENST00000369407 MTMR12Q9C0I1 747 aa12.75□□□□□ -0.37
PHGDH-201ENST00000369407 CISHQ9NSE2 258 aa12.75□□□□□ -0.37
PHGDH-201ENST00000369407 GPATCH2LQ9NWQ4 482 aa12.75□□□□□ -0.37
PHGDH-201ENST00000369407 HSFX1Q9UBD0 423 aa12.75□□□□□ -0.37
PHGDH-201ENST00000369407 INPP5FQ9Y2H2 1132 aa12.75□□□□□ -0.37
PHGDH-201ENST00000369407 C15orf38-AP3S2A0A0A6YYH1 394 aa12.74□□□□□ -0.37
PHGDH-201ENST00000369407 KCNN4O15554 427 aa12.74□□□□□ -0.37
PHGDH-201ENST00000369407 FKBP6O75344 327 aa12.74□□□□□ -0.37
PHGDH-201ENST00000369407 IGBP1P78318 339 aa12.74□□□□□ -0.37
PHGDH-201ENST00000369407 ROR1Q01973 937 aa12.74□□□□□ -0.37
PHGDH-201ENST00000369407 TLR1Q15399 786 aa12.74□□□□□ -0.37
PHGDH-201ENST00000369407 IYDQ6PHW0 289 aa12.74□□□□□ -0.37
PHGDH-201ENST00000369407 ARPINQ7Z6K5 226 aa12.74□□□□□ -0.37
PHGDH-201ENST00000369407 MAF1Q9H063 256 aa12.74□□□□□ -0.37
PHGDH-201ENST00000369407 GPAMQ9HCL2 828 aa12.74□□□□□ -0.37
PHGDH-201ENST00000369407 SIRPGQ9P1W8 387 aa12.74□□□□□ -0.37
PHGDH-201ENST00000369407 NXF1Q9UBU9 619 aaKnown RBP12.74□□□□□ -0.37
PHGDH-201ENST00000369407 HMX2A2RU54 273 aa12.74□□□□□ -0.37
PHGDH-201ENST00000369407 SPDYE16A6NNV3 312 aaPredicted RBP12.74□□□□□ -0.37
PHGDH-201ENST00000369407 GRAP2O75791 330 aa12.74□□□□□ -0.37
PHGDH-201ENST00000369407 C1QAP02745 245 aa12.74□□□□□ -0.37
PHGDH-201ENST00000369407 ASLP04424 464 aa12.74□□□□□ -0.37
PHGDH-201ENST00000369407 BPGMP07738 259 aa12.74□□□□□ -0.37
PHGDH-201ENST00000369407 MIPP30301 263 aa12.74□□□□□ -0.37
PHGDH-201ENST00000369407 CAP2P40123 477 aa12.74□□□□□ -0.37
PHGDH-201ENST00000369407 GRIA1P42261 906 aa12.74□□□□□ -0.37
PHGDH-201ENST00000369407 R3HDM1Q15032 1099 aaKnown RBP12.74□□□□□ -0.37
PHGDH-201ENST00000369407 FASTKD1Q53R41 847 aaKnown RBP12.74□□□□□ -0.37
PHGDH-201ENST00000369407 ADGRF2Q8IZF7 708 aa12.74□□□□□ -0.37
PHGDH-201ENST00000369407 PHTF2Q8N3S3 785 aa12.74□□□□□ -0.37
PHGDH-201ENST00000369407 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.74□□□□□ -0.372e-7■■□□□ 13.6
PHGDH-201ENST00000369407 PIP4K2CQ8TBX8 421 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms