RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 A8MV72 311 aaPredicted RBP11.39□□□□□ -0.59
CDC42BPA-205ENST00000366769 NDUFS3O75489 264 aa11.39□□□□□ -0.59
CDC42BPA-205ENST00000366769 MYCLP1P12525 358 aaPredicted RBP11.39□□□□□ -0.59
CDC42BPA-205ENST00000366769 COILP38432 576 aaPredicted RBP11.39□□□□□ -0.59
CDC42BPA-205ENST00000366769 LIN52Q52LA3 116 aa11.39□□□□□ -0.59
CDC42BPA-205ENST00000366769 MTG1Q9BT17 334 aaPredicted RBP11.39□□□□□ -0.59
CDC42BPA-205ENST00000366769 APOL5Q9BWW9 433 aa11.39□□□□□ -0.59
CDC42BPA-205ENST00000366769 C8orf4Q9NR00 106 aa11.39□□□□□ -0.59
CDC42BPA-205ENST00000366769 CD274Q9NZQ7 290 aa11.39□□□□□ -0.59
CDC42BPA-205ENST00000366769 BFARQ9NZS9 450 aa11.39□□□□□ -0.59
CDC42BPA-205ENST00000366769 TRIM64A6NGJ6 449 aa11.39□□□□□ -0.59
CDC42BPA-205ENST00000366769 TRIM64BA6NI03 449 aa11.39□□□□□ -0.59
CDC42BPA-205ENST00000366769 GNB5O14775 395 aa11.39□□□□□ -0.59
CDC42BPA-205ENST00000366769 ALYREFQ86V81 257 aaKnown RBP11.39□□□□□ -0.59
CDC42BPA-205ENST00000366769 POMGNT2Q8NAT1 580 aa11.39□□□□□ -0.59
CDC42BPA-205ENST00000366769 TPCN2Q8NHX9 752 aa11.39□□□□□ -0.59
CDC42BPA-205ENST00000366769 WDR12Q9GZL7 423 aaKnown RBP11.39□□□□□ -0.59
CDC42BPA-205ENST00000366769 ITGALP20701 1170 aa11.39□□□□□ -0.59
CDC42BPA-205ENST00000366769 GCLMP48507 274 aa11.39□□□□□ -0.59
CDC42BPA-205ENST00000366769 OTUD3Q5T2D3 398 aaPredicted RBP11.39□□□□□ -0.59
CDC42BPA-205ENST00000366769 EHD1Q9H4M9 534 aa11.39□□□□□ -0.59
CDC42BPA-205ENST00000366769 CROTQ9UKG9 612 aa11.39□□□□□ -0.59
CDC42BPA-205ENST00000366769 SIK3Q9Y2K2 1263 aa11.39□□□□□ -0.59
CDC42BPA-205ENST00000366769 CDC16Q13042 620 aa11.39□□□□□ -0.59
CDC42BPA-205ENST00000366769 TAB1Q15750 504 aa11.39□□□□□ -0.59
CDC42BPA-205ENST00000366769 RC3H1Q5TC82 1133 aaKnown RBP11.39□□□□□ -0.59
CDC42BPA-205ENST00000366769 SEL1L3Q68CR1 1132 aa11.39□□□□□ -0.59
CDC42BPA-205ENST00000366769 ERICH5Q6P6B1 374 aa11.39□□□□□ -0.59
CDC42BPA-205ENST00000366769 TBC1D10CQ8IV04 446 aa11.39□□□□□ -0.59
CDC42BPA-205ENST00000366769 WRNIP1Q96S55 665 aa11.39□□□□□ -0.59
CDC42BPA-205ENST00000366769 FAM20BO75063 409 aa11.39□□□□□ -0.59
CDC42BPA-205ENST00000366769 HMBSP08397 361 aa11.39□□□□□ -0.59
CDC42BPA-205ENST00000366769 MYBP10242 640 aa11.39□□□□□ -0.59
CDC42BPA-205ENST00000366769 BCAP31P51572 246 aa11.39□□□□□ -0.59
CDC42BPA-205ENST00000366769 TRAF3Q13114 568 aa11.39□□□□□ -0.59
CDC42BPA-205ENST00000366769 TYSND1Q2T9J0 566 aa11.39□□□□□ -0.59
CDC42BPA-205ENST00000366769 FAM13CQ8NE31 585 aa11.39□□□□□ -0.59
CDC42BPA-205ENST00000366769 UCKL1Q9NWZ5 548 aa11.39□□□□□ -0.59
CDC42BPA-205ENST00000366769 USP21Q9UK80 565 aa11.39□□□□□ -0.59
CDC42BPA-205ENST00000366769 DNMBPQ6XZF7 1577 aa11.39□□□□□ -0.59
CDC42BPA-205ENST00000366769 PSIP1O75475 530 aaKnown RBP11.39□□□□□ -0.59
CDC42BPA-205ENST00000366769 ALDH1A2O94788 518 aa11.39□□□□□ -0.59
CDC42BPA-205ENST00000366769 OXSR1O95747 527 aaPredicted RBP11.39□□□□□ -0.59
CDC42BPA-205ENST00000366769 PHKG1Q16816 387 aa11.39□□□□□ -0.59
CDC42BPA-205ENST00000366769 USP17L2Q6R6M4 530 aa11.39□□□□□ -0.59
CDC42BPA-205ENST00000366769 C3orf62Q6ZUJ4 267 aa11.39□□□□□ -0.59
CDC42BPA-205ENST00000366769 URB2Q14146 1524 aaKnown RBP11.39□□□□□ -0.59
CDC42BPA-205ENST00000366769 PTPRTO14522 1441 aa11.38□□□□□ -0.59
CDC42BPA-205ENST00000366769 FAM92AA1XBS5 289 aa11.38□□□□□ -0.59
CDC42BPA-205ENST00000366769 DBTP11182 482 aaKnown RBP11.38□□□□□ -0.59
CDC42BPA-205ENST00000366769 FAM102AQ5T9C2 384 aaPredicted RBP11.38□□□□□ -0.59
CDC42BPA-205ENST00000366769 PHC2Q8IXK0 858 aa11.38□□□□□ -0.59
CDC42BPA-205ENST00000366769 NSMCE3Q96MG7 304 aa11.38□□□□□ -0.59
CDC42BPA-205ENST00000366769 PAFAH2Q99487 392 aa11.38□□□□□ -0.59
CDC42BPA-205ENST00000366769 SHROOM3Q8TF72 1996 aa11.38□□□□□ -0.59
CDC42BPA-205ENST00000366769 FAM47E-STBD1D6RA91 191 aa11.38□□□□□ -0.59
CDC42BPA-205ENST00000366769 RPA1P27694 616 aa11.38□□□□□ -0.59
CDC42BPA-205ENST00000366769 FAM71DQ8N9W8 422 aa11.38□□□□□ -0.59
CDC42BPA-205ENST00000366769 SLC30A5Q8TAD4 765 aa11.38□□□□□ -0.59
CDC42BPA-205ENST00000366769 MARK4Q96L34 752 aa11.38□□□□□ -0.59
CDC42BPA-205ENST00000366769 FBXO28Q9NVF7 368 aa11.38□□□□□ -0.59
CDC42BPA-205ENST00000366769 ZSCAN5BA6NJL1 495 aa11.38□□□□□ -0.59
CDC42BPA-205ENST00000366769 COMTP21964 271 aa11.38□□□□□ -0.59
CDC42BPA-205ENST00000366769 SLC4A11Q8NBS3 891 aa11.38□□□□□ -0.59
CDC42BPA-205ENST00000366769 ZNF285Q96NJ3 590 aa11.38□□□□□ -0.59
CDC42BPA-205ENST00000366769 WHRNQ9P202 907 aa11.38□□□□□ -0.59
CDC42BPA-205ENST00000366769 BMP3P12645 472 aa11.38□□□□□ -0.59
CDC42BPA-205ENST00000366769 CPB1P15086 417 aa11.38□□□□□ -0.59
CDC42BPA-205ENST00000366769 PON2Q15165 354 aa11.38□□□□□ -0.59
CDC42BPA-205ENST00000366769 DENND6AQ8IWF6 608 aa11.38□□□□□ -0.59
CDC42BPA-205ENST00000366769 SNRNP200O75643 2136 aaKnown RBP11.38□□□□□ -0.59
CDC42BPA-205ENST00000366769 MTSS1O43312 755 aa11.38□□□□□ -0.59
CDC42BPA-205ENST00000366769 MED26O95402 600 aa11.38□□□□□ -0.59
CDC42BPA-205ENST00000366769 GUCY1A2P33402 732 aa11.38□□□□□ -0.59
CDC42BPA-205ENST00000366769 AVPR1AP37288 418 aa11.38□□□□□ -0.59
CDC42BPA-205ENST00000366769 IL5RAQ01344 420 aa11.38□□□□□ -0.59
CDC42BPA-205ENST00000366769 TOP3AQ13472 1001 aaPredicted RBP11.38□□□□□ -0.59
CDC42BPA-205ENST00000366769 EFHC2Q5JST6 749 aa11.38□□□□□ -0.59
CDC42BPA-205ENST00000366769 PACS1Q6VY07 963 aa11.38□□□□□ -0.59
CDC42BPA-205ENST00000366769 UNC13DQ70J99 1090 aa11.38□□□□□ -0.59
CDC42BPA-205ENST00000366769 PTAR1Q7Z6K3 402 aaPredicted RBP11.38□□□□□ -0.59
CDC42BPA-205ENST00000366769 PLA2G4CQ9UP65 541 aa11.38□□□□□ -0.59
CDC42BPA-205ENST00000366769 AP4B1Q9Y6B7 739 aa11.38□□□□□ -0.59
CDC42BPA-205ENST00000366769 GPATCH8Q9UKJ3 1502 aaKnown RBP11.38□□□□□ -0.59
CDC42BPA-205ENST00000366769 F8W810 466 aa11.38□□□□□ -0.59
CDC42BPA-205ENST00000366769 PPEF1O14829 653 aaPredicted RBP11.38□□□□□ -0.59
CDC42BPA-205ENST00000366769 GABBR2O75899 941 aa11.38□□□□□ -0.59
CDC42BPA-205ENST00000366769 IL6P05231 212 aa11.38□□□□□ -0.59
CDC42BPA-205ENST00000366769 RALAP11233 206 aa11.38□□□□□ -0.59
CDC42BPA-205ENST00000366769 PEX2P28328 305 aa11.38□□□□□ -0.59
CDC42BPA-205ENST00000366769 GRIK1P39086 918 aa11.38□□□□□ -0.59
CDC42BPA-205ENST00000366769 TAF8Q7Z7C8 310 aa11.38□□□□□ -0.59
CDC42BPA-205ENST00000366769 SGF29Q96ES7 293 aa11.38□□□□□ -0.59
CDC42BPA-205ENST00000366769 CLPTM1LQ96KA5 538 aa11.38□□□□□ -0.59
CDC42BPA-205ENST00000366769 POLG2Q9UHN1 485 aa11.38□□□□□ -0.59
CDC42BPA-205ENST00000366769 WEE2P0C1S8 567 aa11.38□□□□□ -0.59
CDC42BPA-205ENST00000366769 CENPCQ03188 943 aa11.38□□□□□ -0.59
CDC42BPA-205ENST00000366769 PYDC2Q56P42 97 aa11.38□□□□□ -0.59
CDC42BPA-205ENST00000366769 HMBOX1Q6NT76 420 aa11.38□□□□□ -0.59
CDC42BPA-205ENST00000366769 DBNDD1Q9H9R9 158 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms