RNA–Protein interactions for RNA: ENST00000366739.5

MRPL55-212, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-212ENST00000366739 CCDC127Q96BQ5 260 aa12.12□□□□□ -0.47
MRPL55-212ENST00000366739 ZNF419Q96HQ0 510 aaPredicted RBP12.12□□□□□ -0.47
MRPL55-212ENST00000366739 CGRRF1Q99675 332 aa12.12□□□□□ -0.47
MRPL55-212ENST00000366739 DUSP9Q99956 384 aaKnown RBP12.12□□□□□ -0.47
MRPL55-212ENST00000366739 NACA2Q9H009 215 aa12.12□□□□□ -0.47
MRPL55-212ENST00000366739 SMYD3Q9H7B4 428 aa12.12□□□□□ -0.47
MRPL55-212ENST00000366739 IL37Q9NZH6 218 aa12.12□□□□□ -0.47
MRPL55-212ENST00000366739 NXF1Q9UBU9 619 aaKnown RBP12.12□□□□□ -0.47
MRPL55-212ENST00000366739 PCDHB9Q9Y5E1 797 aa12.12□□□□□ -0.47
MRPL55-212ENST00000366739 CEP192Q8TEP8 1941 aa12.11□□□□□ -0.47
MRPL55-212ENST00000366739 VPS37CA5D8V6 355 aaPredicted RBP12.11□□□□□ -0.47
MRPL55-212ENST00000366739 CACNG3O60359 315 aa12.11□□□□□ -0.47
MRPL55-212ENST00000366739 GREM1O60565 184 aa12.11□□□□□ -0.47
MRPL55-212ENST00000366739 NDUFS2O75306 463 aa12.11□□□□□ -0.47
MRPL55-212ENST00000366739 TBX18O95935 607 aa12.11□□□□□ -0.47
MRPL55-212ENST00000366739 FAM163BP0C2L3 166 aa12.11□□□□□ -0.47
MRPL55-212ENST00000366739 ZDHHC11BP0C7U3 371 aa12.11□□□□□ -0.47
MRPL55-212ENST00000366739 TYRP14679 529 aa12.11□□□□□ -0.47
MRPL55-212ENST00000366739 TUBP50607 506 aa12.11□□□□□ -0.47
MRPL55-212ENST00000366739 CDH8P55286 799 aa12.11□□□□□ -0.47
MRPL55-212ENST00000366739 MYL6P60660 151 aa12.11□□□□□ -0.47
MRPL55-212ENST00000366739 CEBPZQ03701 1054 aaKnown RBP12.11□□□□□ -0.47
MRPL55-212ENST00000366739 SDE2Q6IQ49 451 aa12.11□□□□□ -0.47
MRPL55-212ENST00000366739 FAM173BQ6P4H8 233 aa12.11□□□□□ -0.47
MRPL55-212ENST00000366739 KIAA1324Q6UXG2 1013 aaKnown RBP12.11□□□□□ -0.47
MRPL55-212ENST00000366739 STXBP4Q6ZWJ1 553 aa12.11□□□□□ -0.47
MRPL55-212ENST00000366739 SLCO6A1Q86UG4 719 aa12.11□□□□□ -0.47
MRPL55-212ENST00000366739 MDM1Q8TC05 714 aa12.11□□□□□ -0.47
MRPL55-212ENST00000366739 SCFD1Q8WVM8 642 aa12.11□□□□□ -0.47
MRPL55-212ENST00000366739 ZNF516Q92618 1163 aa12.11□□□□□ -0.47
MRPL55-212ENST00000366739 MRGPRX1Q96LB2 322 aa12.11□□□□□ -0.47
MRPL55-212ENST00000366739 GABRG3Q99928 467 aa12.11□□□□□ -0.47
MRPL55-212ENST00000366739 MED10Q9BTT4 135 aa12.11□□□□□ -0.47
MRPL55-212ENST00000366739 BBS2Q9BXC9 721 aa12.11□□□□□ -0.47
MRPL55-212ENST00000366739 XYLT2Q9H1B5 865 aa12.11□□□□□ -0.47
MRPL55-212ENST00000366739 FAM124BQ9H5Z6 455 aaPredicted RBP12.11□□□□□ -0.47
MRPL55-212ENST00000366739 CCDC86Q9H6F5 360 aaKnown RBP12.11□□□□□ -0.47
MRPL55-212ENST00000366739 KIAA1586Q9HCI6 787 aa12.11□□□□□ -0.47
MRPL55-212ENST00000366739 DMAP1Q9NPF5 467 aaPredicted RBP12.11□□□□□ -0.47
MRPL55-212ENST00000366739 CACNA2D2Q9NY47 1150 aa12.11□□□□□ -0.47
MRPL55-212ENST00000366739 SUSD2Q9UGT4 822 aa12.11□□□□□ -0.47
MRPL55-212ENST00000366739 SMG1Q96Q15 3661 aaKnown RBP12.11□□□□□ -0.47
MRPL55-212ENST00000366739 ATP8B3O60423 1300 aa12.11□□□□□ -0.47
MRPL55-212ENST00000366739 IGSF10Q6WRI0 2623 aa12.1□□□□□ -0.47
MRPL55-212ENST00000366739 FAM92AA1XBS5 289 aa12.1□□□□□ -0.47
MRPL55-212ENST00000366739 WASH3PC4AMC7 463 aa12.1□□□□□ -0.47
MRPL55-212ENST00000366739 TLR5O60602 858 aa12.1□□□□□ -0.47
MRPL55-212ENST00000366739 CBFA2T3O75081 653 aa12.1□□□□□ -0.47
MRPL55-212ENST00000366739 GNSP15586 552 aa12.1□□□□□ -0.47
MRPL55-212ENST00000366739 CYP2J2P51589 502 aa12.1□□□□□ -0.47
MRPL55-212ENST00000366739 CYP24A1Q07973 514 aa12.1□□□□□ -0.47
MRPL55-212ENST00000366739 TRPC3Q13507 836 aa12.1□□□□□ -0.47
MRPL55-212ENST00000366739 PSMD6Q15008 389 aa12.1□□□□□ -0.47
MRPL55-212ENST00000366739 WDR45BQ5MNZ6 344 aa12.1□□□□□ -0.47
MRPL55-212ENST00000366739 SYCP2LQ5T4T6 812 aa12.1□□□□□ -0.47
MRPL55-212ENST00000366739 TPGS1Q6ZTW0 290 aa12.1□□□□□ -0.47
MRPL55-212ENST00000366739 HTR3DQ70Z44 454 aa12.1□□□□□ -0.47
MRPL55-212ENST00000366739 PDILTQ8N807 584 aa12.1□□□□□ -0.47
MRPL55-212ENST00000366739 FOXJ1Q92949 421 aa12.1□□□□□ -0.47
MRPL55-212ENST00000366739 ELMO3Q96BJ8 720 aa12.1□□□□□ -0.47
MRPL55-212ENST00000366739 XPO6Q96QU8 1125 aaKnown RBP12.1□□□□□ -0.47
MRPL55-212ENST00000366739 KLF16Q9BXK1 252 aaPredicted RBP12.1□□□□□ -0.47
MRPL55-212ENST00000366739 GZF1Q9H116 711 aaPredicted RBP12.1□□□□□ -0.47
MRPL55-212ENST00000366739 AGPAT3Q9NRZ7 376 aa12.1□□□□□ -0.47
MRPL55-212ENST00000366739 KRT82Q9NSB4 513 aa12.1□□□□□ -0.47
MRPL55-212ENST00000366739 APOBEC2Q9Y235 224 aaKnown RBP12.1□□□□□ -0.47
MRPL55-212ENST00000366739 RAXQ9Y2V3 346 aa12.1□□□□□ -0.47
MRPL55-212ENST00000366739 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.1□□□□□ -0.47
MRPL55-212ENST00000366739 CELSR3Q9NYQ7 3312 aa12.09□□□□□ -0.47
MRPL55-212ENST00000366739 MEI4A8MW99 385 aa12.09□□□□□ -0.47
MRPL55-212ENST00000366739 CLIC2O15247 247 aa12.09□□□□□ -0.47
MRPL55-212ENST00000366739 TGFB1I1O43294 461 aa12.09□□□□□ -0.47
MRPL55-212ENST00000366739 AP1G2O75843 785 aa12.09□□□□□ -0.47
MRPL55-212ENST00000366739 STAU1O95793 577 aaKnown RBP12.09□□□□□ -0.47
MRPL55-212ENST00000366739 CD6P30203 668 aa12.09□□□□□ -0.47
MRPL55-212ENST00000366739 SCARA5Q6ZMJ2 495 aa12.09□□□□□ -0.47
MRPL55-212ENST00000366739 FUKQ8N0W3 1084 aa12.09□□□□□ -0.47
MRPL55-212ENST00000366739 ZCCHC9Q8N567 271 aaKnown RBP12.09□□□□□ -0.47
MRPL55-212ENST00000366739 ZMIZ2Q8NF64 920 aa12.09□□□□□ -0.47
MRPL55-212ENST00000366739 SETD7Q8WTS6 366 aaKnown RBP12.09□□□□□ -0.47
MRPL55-212ENST00000366739 HNRNPLLQ8WVV9 542 aaKnown RBP12.09□□□□□ -0.47
MRPL55-212ENST00000366739 BHMTQ93088 406 aa12.09□□□□□ -0.47
MRPL55-212ENST00000366739 P2RY11Q96G91 374 aa12.09□□□□□ -0.47
MRPL55-212ENST00000366739 SMARCD1Q96GM5 515 aa12.09□□□□□ -0.47
MRPL55-212ENST00000366739 TOE1Q96GM8 510 aaKnown RBP12.09□□□□□ -0.47
MRPL55-212ENST00000366739 SMOQ99835 787 aa12.09□□□□□ -0.47
MRPL55-212ENST00000366739 IL21RQ9HBE5 538 aa12.09□□□□□ -0.47
MRPL55-212ENST00000366739 MARK1Q9P0L2 795 aa12.09□□□□□ -0.47
MRPL55-212ENST00000366739 WDR35Q9P2L0 1181 aa12.09□□□□□ -0.47
MRPL55-212ENST00000366739 PCOLCE2Q9UKZ9 415 aa12.09□□□□□ -0.47
MRPL55-212ENST00000366739 GCN1Q92616 2671 aaKnown RBP12.09□□□□□ -0.47
MRPL55-212ENST00000366739 APC2O95996 2303 aa12.08□□□□□ -0.48
MRPL55-212ENST00000366739 A0A1B0GTW7 788 aa12.08□□□□□ -0.48
MRPL55-212ENST00000366739 EIF3DO15371 548 aaKnown RBP eCLIP12.08□□□□□ -0.48
MRPL55-212ENST00000366739 BEST1O76090 585 aa12.08□□□□□ -0.48
MRPL55-212ENST00000366739 CISD3P0C7P0 127 aa12.08□□□□□ -0.48
MRPL55-212ENST00000366739 NCAM1P13591 858 aa12.08□□□□□ -0.48
MRPL55-212ENST00000366739 CCDC130P13994 396 aa12.08□□□□□ -0.48
MRPL55-212ENST00000366739 ATICP31939 592 aa12.08□□□□□ -0.48
MRPL55-212ENST00000366739 DGKGP49619 791 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms