RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 C6orf222P0C671 652 aaPredicted RBP20.38■□□□□ 0.85
TRIM58-201ENST00000366481 TMEM191BP0C7N4 346 aa20.38■□□□□ 0.85
TRIM58-201ENST00000366481 MMP8P22894 467 aa20.38■□□□□ 0.85
TRIM58-201ENST00000366481 BST1Q10588 318 aa20.38■□□□□ 0.85
TRIM58-201ENST00000366481 SMAD1Q15797 465 aaKnown RBP20.38■□□□□ 0.85
TRIM58-201ENST00000366481 IYDQ6PHW0 289 aa20.38■□□□□ 0.85
TRIM58-201ENST00000366481 ZCCHC23Q6ZST2 131 aa20.38■□□□□ 0.85
TRIM58-201ENST00000366481 AGBL3Q8NEM8 1001 aa20.38■□□□□ 0.85
TRIM58-201ENST00000366481 ACTL9Q8TC94 416 aa20.38■□□□□ 0.85
TRIM58-201ENST00000366481 HSPH1Q92598 858 aa20.38■□□□□ 0.85
TRIM58-201ENST00000366481 CST8O60676 142 aa20.38■□□□□ 0.85
TRIM58-201ENST00000366481 DNAJC6O75061 913 aa20.38■□□□□ 0.85
TRIM58-201ENST00000366481 OATP04181 439 aa20.38■□□□□ 0.85
TRIM58-201ENST00000366481 UQCRBP14927 111 aa20.38■□□□□ 0.85
TRIM58-201ENST00000366481 IL1R2P27930 398 aa20.38■□□□□ 0.85
TRIM58-201ENST00000366481 PRKD1Q15139 912 aaPredicted RBP20.38■□□□□ 0.85
TRIM58-201ENST00000366481 RNASEH2BQ5TBB1 312 aaKnown RBP20.38■□□□□ 0.85
TRIM58-201ENST00000366481 WDTC1Q8N5D0 677 aa20.38■□□□□ 0.85
TRIM58-201ENST00000366481 TMEM174Q8WUU8 243 aa20.38■□□□□ 0.85
TRIM58-201ENST00000366481 E2F7Q96AV8 911 aa20.38■□□□□ 0.85
TRIM58-201ENST00000366481 HAPLN3Q96S86 360 aa20.38■□□□□ 0.85
TRIM58-201ENST00000366481 IP6K2Q9UHH9 426 aa20.38■□□□□ 0.85
TRIM58-201ENST00000366481 APPL1Q9UKG1 709 aa20.38■□□□□ 0.85
TRIM58-201ENST00000366481 FKBP6O75344 327 aa20.38■□□□□ 0.85
TRIM58-201ENST00000366481 PABPC4LP0CB38 370 aaKnown RBP20.38■□□□□ 0.85
TRIM58-201ENST00000366481 PSMA2P25787 234 aa20.38■□□□□ 0.85
TRIM58-201ENST00000366481 GRIA2P42262 883 aa20.38■□□□□ 0.85
TRIM58-201ENST00000366481 OTUD4Q01804 1114 aaKnown RBP20.38■□□□□ 0.85
TRIM58-201ENST00000366481 TTLL12Q14166 644 aaPredicted RBP20.38■□□□□ 0.85
TRIM58-201ENST00000366481 FKBP1CQ5VVH2 108 aa20.38■□□□□ 0.85
TRIM58-201ENST00000366481 DENND1BQ6P3S1 775 aa20.38■□□□□ 0.85
TRIM58-201ENST00000366481 ZNF280CQ8ND82 737 aa20.38■□□□□ 0.85
TRIM58-201ENST00000366481 C17orf75Q9HAS0 396 aa20.38■□□□□ 0.85
TRIM58-201ENST00000366481 S100A14Q9HCY8 104 aa20.38■□□□□ 0.85
TRIM58-201ENST00000366481 XPO7Q9UIA9 1087 aaKnown RBP20.38■□□□□ 0.85
TRIM58-201ENST00000366481 CNTNAP2Q9UHC6 1331 aa20.38■□□□□ 0.85
TRIM58-201ENST00000366481 TRIM49D1C9J1S8 452 aa20.37■□□□□ 0.85
TRIM58-201ENST00000366481 GRAP2O75791 330 aa20.37■□□□□ 0.85
TRIM58-201ENST00000366481 FAM155BO75949 473 aa20.37■□□□□ 0.85
TRIM58-201ENST00000366481 KBTBD12Q3ZCT8 623 aa20.37■□□□□ 0.85
TRIM58-201ENST00000366481 RALGPS1Q5JS13 557 aa20.37■□□□□ 0.85
TRIM58-201ENST00000366481 ADGRD1Q6QNK2 874 aa20.37■□□□□ 0.85
TRIM58-201ENST00000366481 ZNF677Q86XU0 584 aa20.37■□□□□ 0.85
TRIM58-201ENST00000366481 TMEM192Q8IY95 271 aa20.37■□□□□ 0.85
TRIM58-201ENST00000366481 KIAA0319LQ8IZA0 1049 aa20.37■□□□□ 0.85
TRIM58-201ENST00000366481 SRPK1Q96SB4 655 aaKnown RBP20.37■□□□□ 0.85
TRIM58-201ENST00000366481 CALN1Q9BXU9 219 aa20.37■□□□□ 0.85
TRIM58-201ENST00000366481 PORCNQ9H237 461 aa20.37■□□□□ 0.85
TRIM58-201ENST00000366481 SHOC2Q9UQ13 582 aa20.37■□□□□ 0.85
TRIM58-201ENST00000366481 SCINQ9Y6U3 715 aa20.37■□□□□ 0.85
TRIM58-201ENST00000366481 COL2A1P02458 1487 aaPredicted RBP20.37■□□□□ 0.85
TRIM58-201ENST00000366481 A0A0B4J269 797 aa20.37■□□□□ 0.85
TRIM58-201ENST00000366481 CYB561D2O14569 222 aa20.37■□□□□ 0.85
TRIM58-201ENST00000366481 ZC3H11AO75152 810 aaKnown RBP eCLIP20.37■□□□□ 0.85
TRIM58-201ENST00000366481 GMPSP49915 693 aaPredicted RBP20.37■□□□□ 0.85
TRIM58-201ENST00000366481 ADARP55265 1226 aaKnown RBP20.37■□□□□ 0.85
TRIM58-201ENST00000366481 TRPC3Q13507 836 aa20.37■□□□□ 0.85
TRIM58-201ENST00000366481 DALRD3Q5D0E6 543 aaKnown RBP20.37■□□□□ 0.85
TRIM58-201ENST00000366481 RCOR2Q8IZ40 523 aa20.37■□□□□ 0.85
TRIM58-201ENST00000366481 RNF149Q8NC42 400 aa20.37■□□□□ 0.85
TRIM58-201ENST00000366481 CNKSR2Q8WXI2 1034 aa20.37■□□□□ 0.85
TRIM58-201ENST00000366481 DGCR14Q96DF8 476 aaKnown RBP20.37■□□□□ 0.85
TRIM58-201ENST00000366481 NLRP4Q96MN2 994 aa20.37■□□□□ 0.85
TRIM58-201ENST00000366481 PPCSQ9HAB8 311 aa20.37■□□□□ 0.85
TRIM58-201ENST00000366481 PACSIN3Q9UKS6 424 aa20.37■□□□□ 0.85
TRIM58-201ENST00000366481 B4GALT5O43286 388 aa20.36■□□□□ 0.85
TRIM58-201ENST00000366481 CHN2P52757 468 aa20.36■□□□□ 0.85
TRIM58-201ENST00000366481 PDE1BQ01064 536 aa20.36■□□□□ 0.85
TRIM58-201ENST00000366481 WDR78Q5VTH9 848 aa20.36■□□□□ 0.85
TRIM58-201ENST00000366481 ATG16L1Q676U5 607 aa20.36■□□□□ 0.85
TRIM58-201ENST00000366481 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.36■□□□□ 0.85
TRIM58-201ENST00000366481 PHF13Q86YI8 300 aaPredicted RBP20.36■□□□□ 0.85
TRIM58-201ENST00000366481 FAM71DQ8N9W8 422 aa20.36■□□□□ 0.85
TRIM58-201ENST00000366481 APOPT1Q96IL0 206 aa20.36■□□□□ 0.85
TRIM58-201ENST00000366481 CGRRF1Q99675 332 aa20.36■□□□□ 0.85
TRIM58-201ENST00000366481 ACSS3Q9H6R3 686 aa20.36■□□□□ 0.85
TRIM58-201ENST00000366481 SORBS2O94875 1100 aaKnown RBP20.36■□□□□ 0.85
TRIM58-201ENST00000366481 PTPRAP18433 802 aa20.36■□□□□ 0.85
TRIM58-201ENST00000366481 RGS2P41220 211 aa20.36■□□□□ 0.85
TRIM58-201ENST00000366481 VCPP55072 806 aaKnown RBP20.36■□□□□ 0.85
TRIM58-201ENST00000366481 LY6KQ17RY6 165 aa20.36■□□□□ 0.85
TRIM58-201ENST00000366481 SH3PXD2AQ5TCZ1 1133 aa20.36■□□□□ 0.85
TRIM58-201ENST00000366481 NPNTQ6UXI9 565 aa20.36■□□□□ 0.85
TRIM58-201ENST00000366481 SOX13Q9UN79 622 aa20.36■□□□□ 0.85
TRIM58-201ENST00000366481 SUPT3HO75486 399 aa20.36■□□□□ 0.85
TRIM58-201ENST00000366481 CDO1Q16878 200 aa20.36■□□□□ 0.85
TRIM58-201ENST00000366481 FAXCQ5TGI0 409 aa20.36■□□□□ 0.85
TRIM58-201ENST00000366481 PDSS2Q86YH6 399 aa20.36■□□□□ 0.85
TRIM58-201ENST00000366481 PPIL6Q8IXY8 311 aa20.36■□□□□ 0.85
TRIM58-201ENST00000366481 RNF168Q8IYW5 571 aaPredicted RBP20.36■□□□□ 0.85
TRIM58-201ENST00000366481 RAB3IL1Q8TBN0 382 aa20.36■□□□□ 0.85
TRIM58-201ENST00000366481 CNBD2Q96M20 576 aa20.36■□□□□ 0.85
TRIM58-201ENST00000366481 IFT122Q9HBG6 1241 aa20.36■□□□□ 0.85
TRIM58-201ENST00000366481 CYTH4Q9UIA0 394 aa20.36■□□□□ 0.85
TRIM58-201ENST00000366481 AFG3L2Q9Y4W6 797 aa20.36■□□□□ 0.85
TRIM58-201ENST00000366481 hCG_1818297A0A087WSY0 165 aa20.35■□□□□ 0.85
TRIM58-201ENST00000366481 C15orf38-AP3S2A0A0A6YYH1 394 aa20.35■□□□□ 0.85
TRIM58-201ENST00000366481 SMIM31A0A1B0GVY4 71 aa20.35■□□□□ 0.85
TRIM58-201ENST00000366481 CAPN8A6NHC0 703 aa20.35■□□□□ 0.85
TRIM58-201ENST00000366481 AVILO75366 819 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms