RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 OR6P1Q8NGX9 317 aa16.49■□□□□ 0.23
CLSTN1-201ENST00000361311 SLITRK1Q96PX8 696 aa16.49■□□□□ 0.23
CLSTN1-201ENST00000361311 NAT9Q9BTE0 207 aa16.49■□□□□ 0.23
CLSTN1-201ENST00000361311 FNDC3AQ9Y2H6 1198 aaKnown RBP16.49■□□□□ 0.23
CLSTN1-201ENST00000361311 AP4B1Q9Y6B7 739 aa16.49■□□□□ 0.23
CLSTN1-201ENST00000361311 C3P01024 1663 aa16.49■□□□□ 0.23
CLSTN1-201ENST00000361311 ROBO3Q96MS0 1386 aa16.49■□□□□ 0.23
CLSTN1-201ENST00000361311 A0A087WXM4 84 aa16.49■□□□□ 0.23
CLSTN1-201ENST00000361311 MAPTP10636 758 aaKnown RBP16.49■□□□□ 0.23
CLSTN1-201ENST00000361311 TAL1P17542 331 aaPredicted RBP16.49■□□□□ 0.23
CLSTN1-201ENST00000361311 RARRES1P49788 294 aa16.49■□□□□ 0.23
CLSTN1-201ENST00000361311 NME3Q13232 169 aa16.49■□□□□ 0.23
CLSTN1-201ENST00000361311 DPYSL3Q14195 570 aa16.49■□□□□ 0.23
CLSTN1-201ENST00000361311 EMC2Q15006 297 aa16.49■□□□□ 0.23
CLSTN1-201ENST00000361311 KYAT3Q6YP21 454 aaKnown RBP16.49■□□□□ 0.23
CLSTN1-201ENST00000361311 MECRQ9BV79 373 aa16.49■□□□□ 0.23
CLSTN1-201ENST00000361311 SPATA16Q9BXB7 569 aa16.49■□□□□ 0.23
CLSTN1-201ENST00000361311 PLGRKTQ9HBL7 147 aa16.49■□□□□ 0.23
CLSTN1-201ENST00000361311 GPAMQ9HCL2 828 aa16.49■□□□□ 0.23
CLSTN1-201ENST00000361311 CASZ1Q86V15 1759 aa16.49■□□□□ 0.23
CLSTN1-201ENST00000361311 BCL10O95999 233 aa16.49■□□□□ 0.23
CLSTN1-201ENST00000361311 ZNF554Q86TJ5 538 aa16.49■□□□□ 0.23
CLSTN1-201ENST00000361311 TNIP2Q8NFZ5 429 aa16.49■□□□□ 0.23
CLSTN1-201ENST00000361311 ZSCAN18Q8TBC5 510 aaPredicted RBP16.49■□□□□ 0.23
CLSTN1-201ENST00000361311 WNK4Q96J92 1243 aa16.49■□□□□ 0.23
CLSTN1-201ENST00000361311 C2orf40Q9H1Z8 148 aa16.49■□□□□ 0.23
CLSTN1-201ENST00000361311 SCHIP1Q9P0W5 487 aaPredicted RBP16.49■□□□□ 0.23
CLSTN1-201ENST00000361311 CHD2O14647 1828 aaKnown RBP16.49■□□□□ 0.23
CLSTN1-201ENST00000361311 TBC1D4O60343 1298 aa16.49■□□□□ 0.23
CLSTN1-201ENST00000361311 LSM8O95777 96 aaKnown RBP16.49■□□□□ 0.23
CLSTN1-201ENST00000361311 RPL22P35268 128 aaKnown RBP16.49■□□□□ 0.23
CLSTN1-201ENST00000361311 PRKCEQ02156 737 aa16.49■□□□□ 0.23
CLSTN1-201ENST00000361311 C3orf67Q6ZVT6 689 aa16.49■□□□□ 0.23
CLSTN1-201ENST00000361311 POLNQ7Z5Q5 900 aa16.49■□□□□ 0.23
CLSTN1-201ENST00000361311 PTPRN2Q92932 1015 aa16.49■□□□□ 0.23
CLSTN1-201ENST00000361311 GPATCH2LQ9NWQ4 482 aa16.49■□□□□ 0.23
CLSTN1-201ENST00000361311 CAPN8A6NHC0 703 aa16.48■□□□□ 0.23
CLSTN1-201ENST00000361311 NKRFO15226 690 aaKnown RBP eCLIP16.48■□□□□ 0.234e-8■□□□□ 10.3
CLSTN1-201ENST00000361311 ATP6V1G1O75348 118 aa16.48■□□□□ 0.23
CLSTN1-201ENST00000361311 PRKCBP05771 671 aa16.48■□□□□ 0.23
CLSTN1-201ENST00000361311 ADORA2BP29275 332 aa16.48■□□□□ 0.23
CLSTN1-201ENST00000361311 TAS2R40P59535 323 aa16.48■□□□□ 0.23
CLSTN1-201ENST00000361311 STXBP2Q15833 593 aa16.48■□□□□ 0.23
CLSTN1-201ENST00000361311 SLC9A9Q8IVB4 645 aa16.48■□□□□ 0.23
CLSTN1-201ENST00000361311 ZFAND2BQ8WV99 257 aa16.48■□□□□ 0.23
CLSTN1-201ENST00000361311 SEMA6AQ9H2E6 1030 aa16.48■□□□□ 0.23
CLSTN1-201ENST00000361311 ADCY6O43306 1168 aa16.48■□□□□ 0.23
CLSTN1-201ENST00000361311 RAD17O75943 681 aa16.48■□□□□ 0.23
CLSTN1-201ENST00000361311 CHRM1P11229 460 aaPredicted RBP16.48■□□□□ 0.23
CLSTN1-201ENST00000361311 YY1P25490 414 aa16.48■□□□□ 0.23
CLSTN1-201ENST00000361311 GLRBP48167 497 aa16.48■□□□□ 0.23
CLSTN1-201ENST00000361311 MAMLD1Q13495 774 aa16.48■□□□□ 0.23
CLSTN1-201ENST00000361311 C12orf50Q8NA57 414 aaPredicted RBP16.48■□□□□ 0.23
CLSTN1-201ENST00000361311 C10orf82Q8WW14 230 aa16.48■□□□□ 0.23
CLSTN1-201ENST00000361311 VPS50Q96JG6 964 aa16.48■□□□□ 0.23
CLSTN1-201ENST00000361311 DMTF1Q9Y222 760 aa16.48■□□□□ 0.23
CLSTN1-201ENST00000361311 ZNF839A8K0R7 811 aa16.48■□□□□ 0.23
CLSTN1-201ENST00000361311 SPATA31C1P0DKV0 1188 aa16.48■□□□□ 0.23
CLSTN1-201ENST00000361311 CCNFP41002 786 aa16.48■□□□□ 0.23
CLSTN1-201ENST00000361311 SNRNP48Q6IEG0 339 aaKnown RBP16.48■□□□□ 0.23
CLSTN1-201ENST00000361311 FAM167AQ96KS9 214 aa16.48■□□□□ 0.23
CLSTN1-201ENST00000361311 RSL24D1Q9UHA3 163 aaKnown RBP16.48■□□□□ 0.23
CLSTN1-201ENST00000361311 DAPK2Q9UIK4 370 aa16.48■□□□□ 0.23
CLSTN1-201ENST00000361311 ITGB1BP2Q9UKP3 347 aa16.48■□□□□ 0.23
CLSTN1-201ENST00000361311 SPATA31A6Q5VVP1 1343 aa16.48■□□□□ 0.23
CLSTN1-201ENST00000361311 LCP1P13796 627 aa16.47■□□□□ 0.23
CLSTN1-201ENST00000361311 TNFAIP2Q03169 654 aa16.47■□□□□ 0.23
CLSTN1-201ENST00000361311 FASTKD3Q14CZ7 662 aaKnown RBP16.47■□□□□ 0.23
CLSTN1-201ENST00000361311 DCAF12L1Q5VU92 463 aa16.47■□□□□ 0.23
CLSTN1-201ENST00000361311 TLDC1Q6P9B6 456 aa16.47■□□□□ 0.23
CLSTN1-201ENST00000361311 HHIPL2Q6UWX4 724 aa16.47■□□□□ 0.23
CLSTN1-201ENST00000361311 BHLHE22Q8NFJ8 381 aaPredicted RBP16.47■□□□□ 0.23
CLSTN1-201ENST00000361311 PDCD6IPQ8WUM4 868 aaKnown RBP16.47■□□□□ 0.23
CLSTN1-201ENST00000361311 HEATR9A2RTY3 570 aa16.47■□□□□ 0.23
CLSTN1-201ENST00000361311 H2AFYO75367 372 aaKnown RBP16.47■□□□□ 0.23
CLSTN1-201ENST00000361311 MYL4P12829 197 aa16.47■□□□□ 0.23
CLSTN1-201ENST00000361311 ZNF23P17027 643 aa16.47■□□□□ 0.23
CLSTN1-201ENST00000361311 TGM2P21980 687 aa16.47■□□□□ 0.23
CLSTN1-201ENST00000361311 AMPD1P23109 780 aa16.47■□□□□ 0.23
CLSTN1-201ENST00000361311 FDFT1P37268 417 aa16.47■□□□□ 0.23
CLSTN1-201ENST00000361311 ITFG2Q969R8 447 aa16.47■□□□□ 0.23
CLSTN1-201ENST00000361311 A0A0B4J269 797 aa16.47■□□□□ 0.23
CLSTN1-201ENST00000361311 TRDMT1O14717 391 aaKnown RBP16.47■□□□□ 0.23
CLSTN1-201ENST00000361311 TRIM13O60858 407 aa16.47■□□□□ 0.23
CLSTN1-201ENST00000361311 PTGER2P43116 358 aa16.47■□□□□ 0.23
CLSTN1-201ENST00000361311 ABCE1P61221 599 aaKnown RBP16.47■□□□□ 0.23
CLSTN1-201ENST00000361311 NEDD8Q15843 81 aa16.47■□□□□ 0.23
CLSTN1-201ENST00000361311 GIPC3Q8TF64 312 aa16.47■□□□□ 0.23
CLSTN1-201ENST00000361311 DLG3Q92796 817 aa16.47■□□□□ 0.23
CLSTN1-201ENST00000361311 CISHQ9NSE2 258 aa16.47■□□□□ 0.23
CLSTN1-201ENST00000361311 C6orf203Q9P0P8 240 aaPredicted RBP16.47■□□□□ 0.23
CLSTN1-201ENST00000361311 MON2Q7Z3U7 1717 aa16.47■□□□□ 0.23
CLSTN1-201ENST00000361311 C3orf70A6NLC5 250 aaPredicted RBP16.47■□□□□ 0.23
CLSTN1-201ENST00000361311 SLCO1B7G3V0H7 640 aa16.47■□□□□ 0.23
CLSTN1-201ENST00000361311 NPR1P16066 1061 aa16.47■□□□□ 0.23
CLSTN1-201ENST00000361311 AASDHQ4L235 1098 aaPredicted RBP16.47■□□□□ 0.23
CLSTN1-201ENST00000361311 ELMO2Q96JJ3 720 aa16.47■□□□□ 0.23
CLSTN1-201ENST00000361311 SH3GLB1Q9Y371 365 aa16.47■□□□□ 0.23
CLSTN1-201ENST00000361311 KDM4FA0A1W2PPD8 638 aa16.46■□□□□ 0.23
CLSTN1-201ENST00000361311 NFIAQ12857 509 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms