RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 RGS7P49802 495 aa11.23□□□□□ -0.61
TRAPPC4-201ENST00000359005 ZNF135P52742 658 aaPredicted RBP11.23□□□□□ -0.61
TRAPPC4-201ENST00000359005 ERVFC1P60507 584 aa11.23□□□□□ -0.61
TRAPPC4-201ENST00000359005 YWHAZP63104 245 aaKnown RBP11.23□□□□□ -0.61
TRAPPC4-201ENST00000359005 DSC1Q08554 894 aa11.23□□□□□ -0.61
TRAPPC4-201ENST00000359005 KRT81Q14533 505 aa11.23□□□□□ -0.61
TRAPPC4-201ENST00000359005 CTC1Q2NKJ3 1217 aa11.23□□□□□ -0.61
TRAPPC4-201ENST00000359005 LEXMQ3ZCV2 418 aa11.23□□□□□ -0.61
TRAPPC4-201ENST00000359005 TIGD5Q53EQ6 642 aa11.23□□□□□ -0.61
TRAPPC4-201ENST00000359005 INTS6LQ5JSJ4 861 aaKnown RBP11.23□□□□□ -0.61
TRAPPC4-201ENST00000359005 SPDYCQ5MJ68 293 aa11.23□□□□□ -0.61
TRAPPC4-201ENST00000359005 ALS2CLQ60I27 953 aa11.23□□□□□ -0.61
TRAPPC4-201ENST00000359005 DRICH1Q6PGQ1 229 aaPredicted RBP11.23□□□□□ -0.61
TRAPPC4-201ENST00000359005 OLFML1Q6UWY5 402 aa11.23□□□□□ -0.61
TRAPPC4-201ENST00000359005 SPOCD1Q6ZMY3 1216 aa11.23□□□□□ -0.61
TRAPPC4-201ENST00000359005 BZW1Q7L1Q6 419 aaKnown RBP11.23□□□□□ -0.61
TRAPPC4-201ENST00000359005 STRADAQ7RTN6 431 aa11.23□□□□□ -0.61
TRAPPC4-201ENST00000359005 ADGRD2Q7Z7M1 963 aa11.23□□□□□ -0.61
TRAPPC4-201ENST00000359005 CROCCP2Q86T23 111 aa11.23□□□□□ -0.61
TRAPPC4-201ENST00000359005 SPATA2LQ8IUW3 424 aaPredicted RBP11.23□□□□□ -0.61
TRAPPC4-201ENST00000359005 FUKQ8N0W3 1084 aa11.23□□□□□ -0.61
TRAPPC4-201ENST00000359005 SCML4Q8N228 414 aa11.23□□□□□ -0.61
TRAPPC4-201ENST00000359005 CAVIN3Q969G5 261 aa11.23□□□□□ -0.61
TRAPPC4-201ENST00000359005 HAUS1Q96CS2 278 aa11.23□□□□□ -0.61
TRAPPC4-201ENST00000359005 SLITRK1Q96PX8 696 aa11.23□□□□□ -0.61
TRAPPC4-201ENST00000359005 C11orf84Q9BUA3 381 aaPredicted RBP11.23□□□□□ -0.61
TRAPPC4-201ENST00000359005 EPC1Q9H2F5 836 aa11.23□□□□□ -0.61
TRAPPC4-201ENST00000359005 DPEP3Q9H4B8 488 aa11.23□□□□□ -0.61
TRAPPC4-201ENST00000359005 NSUN3Q9H649 340 aaKnown RBP11.23□□□□□ -0.61
TRAPPC4-201ENST00000359005 DMAP1Q9NPF5 467 aaPredicted RBP11.23□□□□□ -0.61
TRAPPC4-201ENST00000359005 KRT82Q9NSB4 513 aa11.23□□□□□ -0.61
TRAPPC4-201ENST00000359005 SMARCAL1Q9NZC9 954 aa11.23□□□□□ -0.61
TRAPPC4-201ENST00000359005 AMACRQ9UHK6 382 aa11.23□□□□□ -0.61
TRAPPC4-201ENST00000359005 DMGDHQ9UI17 866 aaKnown RBP11.23□□□□□ -0.61
TRAPPC4-201ENST00000359005 OR6C75A6NL08 312 aa11.22□□□□□ -0.61
TRAPPC4-201ENST00000359005 MDM4O15151 490 aa11.22□□□□□ -0.61
TRAPPC4-201ENST00000359005 OPA1O60313 960 aa11.22□□□□□ -0.61
TRAPPC4-201ENST00000359005 SF3B1O75533 1304 aaKnown RBP eCLIP11.22□□□□□ -0.613e-6■■■■■ 137.9
TRAPPC4-201ENST00000359005 DAB1O75553 588 aa11.22□□□□□ -0.61
TRAPPC4-201ENST00000359005 TRUB2O95900 331 aaKnown RBP11.22□□□□□ -0.61
TRAPPC4-201ENST00000359005 MATKP42679 507 aa11.22□□□□□ -0.61
TRAPPC4-201ENST00000359005 MARCKSL1P49006 195 aa11.22□□□□□ -0.61
TRAPPC4-201ENST00000359005 TAS2R40P59535 323 aa11.22□□□□□ -0.61
TRAPPC4-201ENST00000359005 SLC7A5Q01650 507 aa11.22□□□□□ -0.61
TRAPPC4-201ENST00000359005 ARL13BQ3SXY8 428 aa11.22□□□□□ -0.61
TRAPPC4-201ENST00000359005 CFAP58Q5T655 872 aa11.22□□□□□ -0.61
TRAPPC4-201ENST00000359005 ZNF280DQ6N043 979 aa11.22□□□□□ -0.61
TRAPPC4-201ENST00000359005 GSTA5Q7RTV2 222 aa11.22□□□□□ -0.61
TRAPPC4-201ENST00000359005 ADAT2Q7Z6V5 191 aaKnown RBP11.22□□□□□ -0.61
TRAPPC4-201ENST00000359005 FAM35AQ86V20 835 aa11.22□□□□□ -0.61
TRAPPC4-201ENST00000359005 PIGZQ86VD9 579 aa11.22□□□□□ -0.61
TRAPPC4-201ENST00000359005 OSTM1Q86WC4 334 aa11.22□□□□□ -0.61
TRAPPC4-201ENST00000359005 SCUBE3Q8IX30 993 aa11.22□□□□□ -0.61
TRAPPC4-201ENST00000359005 LRRC43Q8N309 656 aa11.22□□□□□ -0.61
TRAPPC4-201ENST00000359005 PRELID2Q8N945 189 aa11.22□□□□□ -0.61
TRAPPC4-201ENST00000359005 JOSD2Q8TAC2 188 aa11.22□□□□□ -0.61
TRAPPC4-201ENST00000359005 AENQ8WTP8 325 aaKnown RBP11.22□□□□□ -0.61
TRAPPC4-201ENST00000359005 C2orf15Q8WU43 125 aaKnown RBP11.22□□□□□ -0.61
TRAPPC4-201ENST00000359005 POF1BQ8WVV4 589 aa11.22□□□□□ -0.61
TRAPPC4-201ENST00000359005 SEC14L1Q92503 715 aa11.22□□□□□ -0.61
TRAPPC4-201ENST00000359005 FUBP3Q96I24 572 aaKnown RBP eCLIP11.22□□□□□ -0.61
TRAPPC4-201ENST00000359005 CCDC114Q96M63 670 aa11.22□□□□□ -0.61
TRAPPC4-201ENST00000359005 FOXP3Q9BZS1 431 aa11.22□□□□□ -0.61
TRAPPC4-201ENST00000359005 TRIM7Q9C029 511 aa11.22□□□□□ -0.61
TRAPPC4-201ENST00000359005 IGFLR1Q9H665 355 aa11.22□□□□□ -0.61
TRAPPC4-201ENST00000359005 EPHX3Q9H6B9 360 aa11.22□□□□□ -0.61
TRAPPC4-201ENST00000359005 ZWILCHQ9H900 591 aa11.22□□□□□ -0.61
TRAPPC4-201ENST00000359005 POPDC2Q9HBU9 364 aa11.22□□□□□ -0.61
TRAPPC4-201ENST00000359005 MED4Q9NPJ6 270 aa11.22□□□□□ -0.61
TRAPPC4-201ENST00000359005 TBC1D13Q9NVG8 400 aa11.22□□□□□ -0.61
TRAPPC4-201ENST00000359005 RAPGEFL1Q9UHV5 662 aa11.22□□□□□ -0.61
TRAPPC4-201ENST00000359005 DRG1Q9Y295 367 aaKnown RBP11.22□□□□□ -0.61
TRAPPC4-201ENST00000359005 FAN1Q9Y2M0 1017 aa11.22□□□□□ -0.61
TRAPPC4-201ENST00000359005 GRXCR2A6NFK2 248 aa11.21□□□□□ -0.61
TRAPPC4-201ENST00000359005 SMAPO00193 183 aa11.21□□□□□ -0.61
TRAPPC4-201ENST00000359005 TRIM66O15016 1216 aa11.21□□□□□ -0.61
TRAPPC4-201ENST00000359005 TTI1O43156 1089 aa11.21□□□□□ -0.61
TRAPPC4-201ENST00000359005 PAPSS1O43252 624 aaPredicted RBP11.21□□□□□ -0.61
TRAPPC4-201ENST00000359005 B4GALT3O60512 393 aa11.21□□□□□ -0.61
TRAPPC4-201ENST00000359005 OAZ2O95190 189 aa11.21□□□□□ -0.61
TRAPPC4-201ENST00000359005 RARAP10276 462 aa11.21□□□□□ -0.61
TRAPPC4-201ENST00000359005 ITIH2P19823 946 aa11.21□□□□□ -0.61
TRAPPC4-201ENST00000359005 KDELR1P24390 212 aa11.21□□□□□ -0.61
TRAPPC4-201ENST00000359005 MIPP30301 263 aa11.21□□□□□ -0.61
TRAPPC4-201ENST00000359005 ACTN2P35609 894 aa11.21□□□□□ -0.61
TRAPPC4-201ENST00000359005 AFF1P51825 1210 aaKnown RBP11.21□□□□□ -0.61
TRAPPC4-201ENST00000359005 TKTL1P51854 596 aa11.21□□□□□ -0.61
TRAPPC4-201ENST00000359005 SLC25A11Q02978 314 aaKnown RBP11.21□□□□□ -0.61
TRAPPC4-201ENST00000359005 ADIGQ0VDE8 80 aa11.21□□□□□ -0.61
TRAPPC4-201ENST00000359005 CASP8Q14790 479 aa11.21□□□□□ -0.61
TRAPPC4-201ENST00000359005 SLMAPQ14BN4 828 aa11.21□□□□□ -0.61
TRAPPC4-201ENST00000359005 SLC25A52Q3SY17 297 aa11.21□□□□□ -0.61
TRAPPC4-201ENST00000359005 ERMARDQ5T6L9 678 aa11.21□□□□□ -0.61
TRAPPC4-201ENST00000359005 LLGL2Q6P1M3 1020 aa11.21□□□□□ -0.61
TRAPPC4-201ENST00000359005 SCYL2Q6P3W7 929 aa11.21□□□□□ -0.61
TRAPPC4-201ENST00000359005 FAM171BQ6P995 826 aa11.21□□□□□ -0.61
TRAPPC4-201ENST00000359005 VSTM1Q6UX27 236 aa11.21□□□□□ -0.61
TRAPPC4-201ENST00000359005 C4orf22Q6V702 233 aa11.21□□□□□ -0.61
TRAPPC4-201ENST00000359005 EP400NLQ6ZTU2 488 aa11.21□□□□□ -0.61
TRAPPC4-201ENST00000359005 CLEC20AQ6ZU45 233 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms