RNA–Protein interactions for RNA: ENST00000358161.9

SPTAN1-201, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTAN1, Length 7,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-201ENST00000358161 CRY2Q49AN0 593 aa10.67□□□□□ -0.7
SPTAN1-201ENST00000358161 PPP4R4Q6NUP7 873 aa10.67□□□□□ -0.7
SPTAN1-201ENST00000358161 LNPEPQ9UIQ6 1025 aa10.67□□□□□ -0.7
SPTAN1-201ENST00000358161 MSRAQ9UJ68 235 aa10.67□□□□□ -0.7
SPTAN1-201ENST00000358161 RAMP2O60895 175 aa10.66□□□□□ -0.7
SPTAN1-201ENST00000358161 YWHAZP63104 245 aaKnown RBP10.66□□□□□ -0.7
SPTAN1-201ENST00000358161 NT5DC1Q5TFE4 455 aa10.66□□□□□ -0.7
SPTAN1-201ENST00000358161 MCOLN2Q8IZK6 566 aa10.66□□□□□ -0.7
SPTAN1-201ENST00000358161 FAM9CQ8IZT9 166 aa10.66□□□□□ -0.7
SPTAN1-201ENST00000358161 TATDN2Q93075 761 aa10.66□□□□□ -0.7
SPTAN1-201ENST00000358161 KCNK16Q96T55 309 aa10.66□□□□□ -0.7
SPTAN1-201ENST00000358161 KCTD10Q9H3F6 313 aa10.66□□□□□ -0.7
SPTAN1-201ENST00000358161 ATXN3LQ9H3M9 355 aa10.66□□□□□ -0.7
SPTAN1-201ENST00000358161 TIMM13Q9Y5L4 95 aaPredicted RBP10.66□□□□□ -0.7
SPTAN1-201ENST00000358161 EVPLLA8MZ36 301 aa10.66□□□□□ -0.7
SPTAN1-201ENST00000358161 RECQL4O94761 1208 aa10.66□□□□□ -0.7
SPTAN1-201ENST00000358161 PTPN7P35236 360 aa10.66□□□□□ -0.7
SPTAN1-201ENST00000358161 GRK3P35626 688 aa10.66□□□□□ -0.7
SPTAN1-201ENST00000358161 ANXA11P50995 505 aaKnown RBP10.66□□□□□ -0.7
SPTAN1-201ENST00000358161 CCNG2Q16589 344 aa10.66□□□□□ -0.7
SPTAN1-201ENST00000358161 CCDC149Q6ZUS6 474 aa10.66□□□□□ -0.7
SPTAN1-201ENST00000358161 ZNF571Q7Z3V5 609 aaPredicted RBP10.66□□□□□ -0.7
SPTAN1-201ENST00000358161 RFWD2Q8NHY2 731 aa10.66□□□□□ -0.7
SPTAN1-201ENST00000358161 TMA16Q96EY4 203 aaKnown RBP10.66□□□□□ -0.7
SPTAN1-201ENST00000358161 WARS2Q9UGM6 360 aaKnown RBP10.66□□□□□ -0.7
SPTAN1-201ENST00000358161 TMEM120BA0PK00 339 aa10.66□□□□□ -0.7
SPTAN1-201ENST00000358161 SMIM10L2AP0DMW4 78 aa10.66□□□□□ -0.7
SPTAN1-201ENST00000358161 SMIM10L2BP0DMW5 78 aa10.66□□□□□ -0.7
SPTAN1-201ENST00000358161 LRRC74AQ0VAA2 488 aa10.66□□□□□ -0.7
SPTAN1-201ENST00000358161 MKRN4PQ13434 485 aaPredicted RBP10.66□□□□□ -0.7
SPTAN1-201ENST00000358161 MARC1Q5VT66 337 aa10.66□□□□□ -0.7
SPTAN1-201ENST00000358161 FZD1Q9UP38 647 aa10.66□□□□□ -0.7
SPTAN1-201ENST00000358161 TRIM49D1C9J1S8 452 aa10.66□□□□□ -0.7
SPTAN1-201ENST00000358161 HNRNPRO43390 633 aaKnown RBP10.66□□□□□ -0.7
SPTAN1-201ENST00000358161 CYTH3O43739 400 aa10.66□□□□□ -0.7
SPTAN1-201ENST00000358161 GLP2RO95838 553 aa10.66□□□□□ -0.7
SPTAN1-201ENST00000358161 HMGCRP04035 888 aa10.66□□□□□ -0.7
SPTAN1-201ENST00000358161 SGO1Q5FBB7 561 aa10.66□□□□□ -0.7
SPTAN1-201ENST00000358161 ADAM33Q9BZ11 813 aa10.66□□□□□ -0.7
SPTAN1-201ENST00000358161 PRDM16Q9HAZ2 1276 aa10.66□□□□□ -0.7
SPTAN1-201ENST00000358161 SLC29A2Q14542 456 aa10.66□□□□□ -0.7
SPTAN1-201ENST00000358161 CACHD1Q5VU97 1274 aa10.66□□□□□ -0.7
SPTAN1-201ENST00000358161 DSG4Q86SJ6 1040 aa10.66□□□□□ -0.7
SPTAN1-201ENST00000358161 CERS5Q8N5B7 392 aa10.66□□□□□ -0.7
SPTAN1-201ENST00000358161 ZNF555Q8NEP9 628 aa10.66□□□□□ -0.7
SPTAN1-201ENST00000358161 KCNMB3Q9NPA1 279 aa10.66□□□□□ -0.7
SPTAN1-201ENST00000358161 EIF3LQ9Y262 564 aaKnown RBP10.66□□□□□ -0.7
SPTAN1-201ENST00000358161 EML1O00423 815 aa10.66□□□□□ -0.7
SPTAN1-201ENST00000358161 SERPINF2P08697 491 aa10.66□□□□□ -0.7
SPTAN1-201ENST00000358161 MAGEA9P43362 315 aa10.66□□□□□ -0.7
SPTAN1-201ENST00000358161 CSE1LP55060 971 aaKnown RBP10.66□□□□□ -0.7
SPTAN1-201ENST00000358161 ITGA9Q13797 1035 aa10.66□□□□□ -0.7
SPTAN1-201ENST00000358161 CHI3L2Q15782 390 aa10.66□□□□□ -0.7
SPTAN1-201ENST00000358161 FAXCQ5TGI0 409 aa10.66□□□□□ -0.7
SPTAN1-201ENST00000358161 CCDC60Q8IWA6 550 aaPredicted RBP10.66□□□□□ -0.7
SPTAN1-201ENST00000358161 NUP93Q8N1F7 819 aa10.66□□□□□ -0.7
SPTAN1-201ENST00000358161 CSGALNACT1Q8TDX6 532 aa10.66□□□□□ -0.7
SPTAN1-201ENST00000358161 APBB2Q92870 758 aa10.66□□□□□ -0.7
SPTAN1-201ENST00000358161 NR1H4Q96RI1 486 aaPredicted RBP10.66□□□□□ -0.7
SPTAN1-201ENST00000358161 C17orf80Q9BSJ5 609 aa10.66□□□□□ -0.7
SPTAN1-201ENST00000358161 FICDQ9BVA6 458 aa10.66□□□□□ -0.7
SPTAN1-201ENST00000358161 SYTL2Q9HCH5 934 aa10.66□□□□□ -0.7
SPTAN1-201ENST00000358161 MRPL17Q9NRX2 175 aaKnown RBP10.66□□□□□ -0.7
SPTAN1-201ENST00000358161 SPASTQ9UBP0 616 aa10.66□□□□□ -0.7
SPTAN1-201ENST00000358161 HSPA1AP0DMV8 641 aaKnown RBP10.65□□□□□ -0.7
SPTAN1-201ENST00000358161 HSPA1BP0DMV9 641 aaKnown RBP10.65□□□□□ -0.7
SPTAN1-201ENST00000358161 MAPK1P28482 360 aa10.65□□□□□ -0.7
SPTAN1-201ENST00000358161 OR1E1P30953 314 aa10.65□□□□□ -0.7
SPTAN1-201ENST00000358161 NCKAP1LP55160 1127 aa10.65□□□□□ -0.7
SPTAN1-201ENST00000358161 C2CD6Q53TS8 623 aa10.65□□□□□ -0.7
SPTAN1-201ENST00000358161 MTMR9Q96QG7 549 aa10.65□□□□□ -0.7
SPTAN1-201ENST00000358161 TSPAN18Q96SJ8 248 aa10.65□□□□□ -0.7
SPTAN1-201ENST00000358161 RBBP8Q99708 897 aa10.65□□□□□ -0.7
SPTAN1-201ENST00000358161 NDEL1Q9GZM8 345 aa10.65□□□□□ -0.7
SPTAN1-201ENST00000358161 PDGFDQ9GZP0 370 aaPredicted RBP10.65□□□□□ -0.7
SPTAN1-201ENST00000358161 UTP6Q9NYH9 597 aaKnown RBP10.65□□□□□ -0.7
SPTAN1-201ENST00000358161 MRC1P22897 1456 aa10.65□□□□□ -0.7
SPTAN1-201ENST00000358161 SOAT1P35610 550 aa10.65□□□□□ -0.7
SPTAN1-201ENST00000358161 SLC39A12Q504Y0 691 aa10.65□□□□□ -0.7
SPTAN1-201ENST00000358161 ZC3H12BQ5HYM0 836 aaKnown RBP10.65□□□□□ -0.7
SPTAN1-201ENST00000358161 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.65□□□□□ -0.7
SPTAN1-201ENST00000358161 TRPM4Q8TD43 1214 aa10.65□□□□□ -0.7
SPTAN1-201ENST00000358161 HES6Q96HZ4 224 aa10.65□□□□□ -0.7
SPTAN1-201ENST00000358161 ABHD8Q96I13 439 aa10.65□□□□□ -0.7
SPTAN1-201ENST00000358161 WNK4Q96J92 1243 aa10.65□□□□□ -0.7
SPTAN1-201ENST00000358161 ILKAPQ9H0C8 392 aaPredicted RBP10.65□□□□□ -0.7
SPTAN1-201ENST00000358161 TMEM161AQ9NX61 479 aa10.65□□□□□ -0.7
SPTAN1-201ENST00000358161 MARCOQ9UEW3 520 aaPredicted RBP10.65□□□□□ -0.7
SPTAN1-201ENST00000358161 UBIAD1Q9Y5Z9 338 aa10.65□□□□□ -0.7
SPTAN1-201ENST00000358161 MORC2Q9Y6X9 1032 aaPredicted RBP10.65□□□□□ -0.7
SPTAN1-201ENST00000358161 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.65□□□□□ -0.7
SPTAN1-201ENST00000358161 IGF2BP3O00425 579 aaKnown RBP eCLIP10.65□□□□□ -0.74e-7■■□□□ 13.8
SPTAN1-201ENST00000358161 JCHAINP01591 159 aa10.65□□□□□ -0.7
SPTAN1-201ENST00000358161 NCALDP61601 193 aa10.65□□□□□ -0.7
SPTAN1-201ENST00000358161 NLRP9Q7RTR0 991 aa10.65□□□□□ -0.7
SPTAN1-201ENST00000358161 STX19Q8N4C7 294 aa10.65□□□□□ -0.7
SPTAN1-201ENST00000358161 EDEM1Q92611 657 aa10.65□□□□□ -0.7
SPTAN1-201ENST00000358161 CCDC90BQ9GZT6 254 aa10.65□□□□□ -0.7
SPTAN1-201ENST00000358161 GPATCH2LQ9NWQ4 482 aa10.65□□□□□ -0.7
SPTAN1-201ENST00000358161 E2F8A0AVK6 867 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms