RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 PABPC1LQ4VXU2 614 aaKnown RBP26.6■■□□□ 1.85
SSBP3-202ENST00000357475 PRSS36Q5K4E3 855 aa26.6■■□□□ 1.85
SSBP3-202ENST00000357475 STXBP5Q5T5C0 1151 aa26.6■■□□□ 1.85
SSBP3-202ENST00000357475 SYPL2Q5VXT5 272 aa26.6■■□□□ 1.85
SSBP3-202ENST00000357475 POTEHQ6S545 545 aa26.6■■□□□ 1.85
SSBP3-202ENST00000357475 SHKBP1Q8TBC3 707 aa26.6■■□□□ 1.85
SSBP3-202ENST00000357475 BTBD6Q96KE9 485 aa26.6■■□□□ 1.85
SSBP3-202ENST00000357475 EHD2Q9NZN4 543 aa26.6■■□□□ 1.85
SSBP3-202ENST00000357475 UXTQ9UBK9 157 aaPredicted RBP26.6■■□□□ 1.85
SSBP3-202ENST00000357475 SIGLEC16A6NMB1 481 aa26.59■■□□□ 1.85
SSBP3-202ENST00000357475 NCK2O43639 380 aa26.59■■□□□ 1.85
SSBP3-202ENST00000357475 CCDC175P0C221 793 aa26.59■■□□□ 1.85
SSBP3-202ENST00000357475 HOXB8P17481 243 aaPredicted RBP26.59■■□□□ 1.85
SSBP3-202ENST00000357475 YWHAZP63104 245 aaKnown RBP26.59■■□□□ 1.85
SSBP3-202ENST00000357475 PITX1P78337 314 aaPredicted RBP26.59■■□□□ 1.85
SSBP3-202ENST00000357475 EFHC1Q5JVL4 640 aa26.59■■□□□ 1.85
SSBP3-202ENST00000357475 PDZD4Q76G19 769 aaPredicted RBP26.59■■□□□ 1.85
SSBP3-202ENST00000357475 DEFB106AQ8N104 65 aa26.59■■□□□ 1.85
SSBP3-202ENST00000357475 SLC35G2Q8TBE7 412 aa26.59■■□□□ 1.85
SSBP3-202ENST00000357475 ADAM33Q9BZ11 813 aa26.59■■□□□ 1.85
SSBP3-202ENST00000357475 ADAM7Q9H2U9 754 aa26.59■■□□□ 1.85
SSBP3-202ENST00000357475 CCSER2Q9H7U1 834 aa26.59■■□□□ 1.85
SSBP3-202ENST00000357475 TLR8Q9NR97 1041 aaKnown RBP26.59■■□□□ 1.85
SSBP3-202ENST00000357475 C2orf78A6NCI8 922 aa26.58■■□□□ 1.85
SSBP3-202ENST00000357475 USP27XA6NNY8 438 aa26.58■■□□□ 1.85
SSBP3-202ENST00000357475 H3BQ06 376 aaPredicted RBP26.58■■□□□ 1.85
SSBP3-202ENST00000357475 PJA2O43164 708 aa26.58■■□□□ 1.85
SSBP3-202ENST00000357475 HSF2BPO75031 334 aa26.58■■□□□ 1.85
SSBP3-202ENST00000357475 TFE3P19532 575 aaPredicted RBP26.58■■□□□ 1.85
SSBP3-202ENST00000357475 SCNN1AP37088 669 aa26.58■■□□□ 1.85
SSBP3-202ENST00000357475 ARHGAP25P42331 645 aa26.58■■□□□ 1.85
SSBP3-202ENST00000357475 SKIV2LQ15477 1246 aaKnown RBP26.58■■□□□ 1.85
SSBP3-202ENST00000357475 ITFG1Q8TB96 612 aa26.58■■□□□ 1.85
SSBP3-202ENST00000357475 SLC2A13Q96QE2 648 aa26.58■■□□□ 1.85
SSBP3-202ENST00000357475 ATXN3LQ9H3M9 355 aa26.58■■□□□ 1.85
SSBP3-202ENST00000357475 ASNSD1Q9NWL6 643 aa26.58■■□□□ 1.85
SSBP3-202ENST00000357475 TRPM5Q9NZQ8 1165 aa26.58■■□□□ 1.85
SSBP3-202ENST00000357475 CTTNBP2NLQ9P2B4 639 aa26.58■■□□□ 1.85
SSBP3-202ENST00000357475 MDM4O15151 490 aa26.57■■□□□ 1.84
SSBP3-202ENST00000357475 SART1O43290 800 aaKnown RBP26.57■■□□□ 1.84
SSBP3-202ENST00000357475 DAB1O75553 588 aa26.57■■□□□ 1.84
SSBP3-202ENST00000357475 TBX18O95935 607 aa26.57■■□□□ 1.84
SSBP3-202ENST00000357475 RARGP13631 454 aa26.57■■□□□ 1.84
SSBP3-202ENST00000357475 ZNF252P-AS1Q0IIN9 211 aa26.57■■□□□ 1.84
SSBP3-202ENST00000357475 SNX30Q5VWJ9 437 aa26.57■■□□□ 1.84
SSBP3-202ENST00000357475 C17orf53Q8N3J3 647 aaPredicted RBP26.57■■□□□ 1.84
SSBP3-202ENST00000357475 PDZD8Q8NEN9 1154 aa26.57■■□□□ 1.84
SSBP3-202ENST00000357475 ING5Q8WYH8 240 aa26.57■■□□□ 1.84
SSBP3-202ENST00000357475 OVCA2Q8WZ82 227 aa26.57■■□□□ 1.84
SSBP3-202ENST00000357475 POPDC2Q9HBU9 364 aa26.57■■□□□ 1.84
SSBP3-202ENST00000357475 LUC7LQ9NQ29 371 aaKnown RBP26.57■■□□□ 1.84
SSBP3-202ENST00000357475 MTPAPQ9NVV4 582 aaKnown RBP eCLIP26.57■■□□□ 1.84
SSBP3-202ENST00000357475 EIF2AK3Q9NZJ5 1116 aaKnown RBP26.57■■□□□ 1.84
SSBP3-202ENST00000357475 COL6A3P12111 3177 aa26.57■■□□□ 1.84
SSBP3-202ENST00000357475 DENND4AQ7Z401 1863 aa26.57■■□□□ 1.84
SSBP3-202ENST00000357475 TMEM191CA6NGB0 347 aa26.56■■□□□ 1.84
SSBP3-202ENST00000357475 C2CD4BA6NLJ0 364 aa26.56■■□□□ 1.84
SSBP3-202ENST00000357475 GLI1P08151 1106 aa26.56■■□□□ 1.84
SSBP3-202ENST00000357475 TEAD2Q15562 447 aa26.56■■□□□ 1.84
SSBP3-202ENST00000357475 RAB6CQ53S08 254 aa26.56■■□□□ 1.84
SSBP3-202ENST00000357475 BTBD8Q5XKL5 378 aa26.56■■□□□ 1.84
SSBP3-202ENST00000357475 TXNDC8Q6A555 127 aa26.56■■□□□ 1.84
SSBP3-202ENST00000357475 ZNF564Q8TBZ8 553 aaPredicted RBP26.56■■□□□ 1.84
SSBP3-202ENST00000357475 RXFP2Q8WXD0 754 aa26.56■■□□□ 1.84
SSBP3-202ENST00000357475 RFFLQ8WZ73 363 aa26.56■■□□□ 1.84
SSBP3-202ENST00000357475 CFAP57Q96MR6 1250 aa26.56■■□□□ 1.84
SSBP3-202ENST00000357475 SLC22A12Q96S37 553 aa26.56■■□□□ 1.84
SSBP3-202ENST00000357475 RAB6CQ9H0N0 254 aa26.56■■□□□ 1.84
SSBP3-202ENST00000357475 TRMT1Q9NXH9 659 aaKnown RBP26.56■■□□□ 1.84
SSBP3-202ENST00000357475 CALCOCO1Q9P1Z2 691 aa26.56■■□□□ 1.84
SSBP3-202ENST00000357475 SCINQ9Y6U3 715 aa26.56■■□□□ 1.84
SSBP3-202ENST00000357475 NCAM1P13591 858 aa26.55■■□□□ 1.84
SSBP3-202ENST00000357475 CEBPBP17676 345 aa26.55■■□□□ 1.84
SSBP3-202ENST00000357475 DCAF6Q58WW2 860 aa26.55■■□□□ 1.84
SSBP3-202ENST00000357475 OTUD1Q5VV17 481 aaPredicted RBP26.55■■□□□ 1.84
SSBP3-202ENST00000357475 DCUN1D2Q6PH85 259 aa26.55■■□□□ 1.84
SSBP3-202ENST00000357475 CPNE8Q86YQ8 564 aa26.55■■□□□ 1.84
SSBP3-202ENST00000357475 REXO1L1PQ8IX06 675 aa26.55■■□□□ 1.84
SSBP3-202ENST00000357475 ARHGAP18Q8N392 663 aa26.55■■□□□ 1.84
SSBP3-202ENST00000357475 ADAM32Q8TC27 787 aa26.55■■□□□ 1.84
SSBP3-202ENST00000357475 UBE2ZQ9H832 354 aaPredicted RBP26.55■■□□□ 1.84
SSBP3-202ENST00000357475 LZTFL1Q9NQ48 299 aa26.55■■□□□ 1.84
SSBP3-202ENST00000357475 ABCC13Q9NSE7 274 aa26.55■■□□□ 1.84
SSBP3-202ENST00000357475 PAXBP1Q9Y5B6 917 aa26.55■■□□□ 1.84
SSBP3-202ENST00000357475 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP26.55■■□□□ 1.84
SSBP3-202ENST00000357475 BUB1O43683 1085 aa26.55■■□□□ 1.84
SSBP3-202ENST00000357475 KCNA5P22460 613 aa26.55■■□□□ 1.84
SSBP3-202ENST00000357475 SH3PXD2AQ5TCZ1 1133 aa26.55■■□□□ 1.84
SSBP3-202ENST00000357475 SMRP1Q8NCR6 262 aa26.55■■□□□ 1.84
SSBP3-202ENST00000357475 GOLGA1Q92805 767 aa26.55■■□□□ 1.84
SSBP3-202ENST00000357475 CYP2S1Q96SQ9 504 aa26.55■■□□□ 1.84
SSBP3-202ENST00000357475 RNF38Q9H0F5 515 aa26.55■■□□□ 1.84
SSBP3-202ENST00000357475 TRPC7Q9HCX4 862 aa26.55■■□□□ 1.84
SSBP3-202ENST00000357475 MRPL47Q9HD33 250 aaKnown RBP26.55■■□□□ 1.84
SSBP3-202ENST00000357475 CLIC5Q9NZA1 410 aa26.55■■□□□ 1.84
SSBP3-202ENST00000357475 ANAPC7Q9UJX3 599 aa26.55■■□□□ 1.84
SSBP3-202ENST00000357475 UNC80Q8N2C7 3258 aa26.54■■□□□ 1.84
SSBP3-202ENST00000357475 COCHO43405 550 aa26.54■■□□□ 1.84
SSBP3-202ENST00000357475 TLR5O60602 858 aa26.54■■□□□ 1.84
SSBP3-202ENST00000357475 PDGFRAP16234 1089 aa26.54■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms