RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 PLD3Q8IV08 490 aa6.78□□□□□ -1.32
TRIM38-201ENST00000357085 KBTBD8Q8NFY9 601 aa6.78□□□□□ -1.32
TRIM38-201ENST00000357085 GCNAQ96QF7 691 aa6.78□□□□□ -1.32
TRIM38-201ENST00000357085 YIPF2Q9BWQ6 316 aa6.78□□□□□ -1.32
TRIM38-201ENST00000357085 TXLNGYQ9BZA5 131 aa6.78□□□□□ -1.32
TRIM38-201ENST00000357085 GREM2Q9H772 168 aa6.78□□□□□ -1.32
TRIM38-201ENST00000357085 CYLDQ9NQC7 956 aa6.78□□□□□ -1.32
TRIM38-201ENST00000357085 TCRBV5S4A2TA0A5A2 114 aa6.78□□□□□ -1.32
TRIM38-201ENST00000357085 UBE2Q2LH0YL09 131 aa6.78□□□□□ -1.32
TRIM38-201ENST00000357085 FBP2O00757 339 aa6.78□□□□□ -1.32
TRIM38-201ENST00000357085 FKBP9O95302 570 aa6.78□□□□□ -1.32
TRIM38-201ENST00000357085 DLGAP3O95886 979 aa6.78□□□□□ -1.32
TRIM38-201ENST00000357085 RPA3P35244 121 aaPredicted RBP6.78□□□□□ -1.32
TRIM38-201ENST00000357085 TRAP1Q12931 704 aaKnown RBP6.78□□□□□ -1.32
TRIM38-201ENST00000357085 RFTN1Q14699 578 aaPredicted RBP6.78□□□□□ -1.32
TRIM38-201ENST00000357085 ABCB5Q2M3G0 1257 aa6.78□□□□□ -1.32
TRIM38-201ENST00000357085 BRDTQ58F21 947 aaPredicted RBP6.78□□□□□ -1.32
TRIM38-201ENST00000357085 NSMFQ6X4W1 530 aa6.78□□□□□ -1.32
TRIM38-201ENST00000357085 RBBP8Q99708 897 aa6.78□□□□□ -1.32
TRIM38-201ENST00000357085 TMEM47Q9BQJ4 181 aa6.78□□□□□ -1.32
TRIM38-201ENST00000357085 CORO1BQ9BR76 489 aa6.78□□□□□ -1.32
TRIM38-201ENST00000357085 FAIMQ9NVQ4 179 aa6.78□□□□□ -1.32
TRIM38-201ENST00000357085 SCAF8Q9UPN6 1271 aaKnown RBP6.78□□□□□ -1.32
TRIM38-201ENST00000357085 ZNF804BA4D1E1 1349 aa6.78□□□□□ -1.32
TRIM38-201ENST00000357085 SPATA31A6Q5VVP1 1343 aa6.78□□□□□ -1.32
TRIM38-201ENST00000357085 AKAP14Q86UN6 197 aa6.78□□□□□ -1.32
TRIM38-201ENST00000357085 FBXO11Q86XK2 927 aa6.78□□□□□ -1.32
TRIM38-201ENST00000357085 ZNF786Q8N393 782 aa6.78□□□□□ -1.32
TRIM38-201ENST00000357085 SUN5Q8TC36 379 aa6.78□□□□□ -1.32
TRIM38-201ENST00000357085 FAM111AQ96PZ2 611 aa6.78□□□□□ -1.32
TRIM38-201ENST00000357085 ZDHHC18Q9NUE0 388 aa6.78□□□□□ -1.32
TRIM38-201ENST00000357085 AP4B1Q9Y6B7 739 aa6.78□□□□□ -1.32
TRIM38-201ENST00000357085 MPOP05164 745 aa6.78□□□□□ -1.32
TRIM38-201ENST00000357085 CDK9P50750 372 aaKnown RBP6.78□□□□□ -1.32
TRIM38-201ENST00000357085 FAF2Q96CS3 445 aa6.78□□□□□ -1.32
TRIM38-201ENST00000357085 CEP19Q96LK0 163 aa6.78□□□□□ -1.32
TRIM38-201ENST00000357085 TMEM79Q9BSE2 394 aa6.78□□□□□ -1.32
TRIM38-201ENST00000357085 PHF11Q9UIL8 331 aa6.78□□□□□ -1.32
TRIM38-201ENST00000357085 COPG1Q9Y678 874 aaKnown RBP6.78□□□□□ -1.32
TRIM38-201ENST00000357085 PRAMEF22A3QJZ6 481 aa6.78□□□□□ -1.32
TRIM38-201ENST00000357085 ZBBXA8MT70 800 aa6.78□□□□□ -1.32
TRIM38-201ENST00000357085 FSCN2O14926 492 aa6.78□□□□□ -1.32
TRIM38-201ENST00000357085 EPHB6O15197 1021 aa6.78□□□□□ -1.32
TRIM38-201ENST00000357085 GAS2O43903 313 aaKnown RBP6.78□□□□□ -1.32
TRIM38-201ENST00000357085 ADRA1DP25100 572 aa6.78□□□□□ -1.32
TRIM38-201ENST00000357085 ECHS1P30084 290 aa6.78□□□□□ -1.32
TRIM38-201ENST00000357085 SLC22A9Q8IVM8 553 aa6.78□□□□□ -1.32
TRIM38-201ENST00000357085 NKX2-3Q8TAU0 364 aa6.78□□□□□ -1.32
TRIM38-201ENST00000357085 KAZALD1Q96I82 304 aa6.78□□□□□ -1.32
TRIM38-201ENST00000357085 SYNDIG1Q9H7V2 258 aa6.78□□□□□ -1.32
TRIM38-201ENST00000357085 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.78□□□□□ -1.32
TRIM38-201ENST00000357085 ARL8BQ9NVJ2 186 aa6.78□□□□□ -1.32
TRIM38-201ENST00000357085 MKS1Q9NXB0 559 aa6.78□□□□□ -1.32
TRIM38-201ENST00000357085 RAD54BQ9Y620 910 aa6.78□□□□□ -1.32
TRIM38-201ENST00000357085 CYP11B1P15538 503 aa6.78□□□□□ -1.32
TRIM38-201ENST00000357085 RPS8P62241 208 aaKnown RBP6.78□□□□□ -1.32
TRIM38-201ENST00000357085 PRAMEP78395 509 aa6.78□□□□□ -1.32
TRIM38-201ENST00000357085 TRIM60Q495X7 471 aa6.78□□□□□ -1.32
TRIM38-201ENST00000357085 BOLA3Q53S33 107 aa6.78□□□□□ -1.32
TRIM38-201ENST00000357085 SPOPLQ6IQ16 392 aa6.78□□□□□ -1.32
TRIM38-201ENST00000357085 FAM160B2Q86V87 743 aa6.78□□□□□ -1.32
TRIM38-201ENST00000357085 DEFB107AQ8IZN7 70 aa6.78□□□□□ -1.32
TRIM38-201ENST00000357085 CYGBQ8WWM9 190 aa6.78□□□□□ -1.32
TRIM38-201ENST00000357085 PIGSQ96S52 555 aa6.78□□□□□ -1.32
TRIM38-201ENST00000357085 HEATR9A2RTY3 570 aa6.78□□□□□ -1.32
TRIM38-201ENST00000357085 HARS2P49590 506 aaKnown RBP6.78□□□□□ -1.32
TRIM38-201ENST00000357085 TSPY1Q01534 308 aa6.78□□□□□ -1.32
TRIM38-201ENST00000357085 OTUD4Q01804 1114 aaKnown RBP6.78□□□□□ -1.32
TRIM38-201ENST00000357085 CSTF3Q12996 717 aaKnown RBP6.78□□□□□ -1.32
TRIM38-201ENST00000357085 LLGL1Q15334 1064 aa6.78□□□□□ -1.32
TRIM38-201ENST00000357085 CLEC16AQ2KHT3 1053 aa6.78□□□□□ -1.32
TRIM38-201ENST00000357085 SEL1L3Q68CR1 1132 aa6.78□□□□□ -1.32
TRIM38-201ENST00000357085 RAPH1Q70E73 1250 aa6.78□□□□□ -1.32
TRIM38-201ENST00000357085 C12orf56Q8IXR9 622 aa6.78□□□□□ -1.32
TRIM38-201ENST00000357085 PRELID2Q8N945 189 aa6.78□□□□□ -1.32
TRIM38-201ENST00000357085 SHCBP1Q8NEM2 672 aa6.78□□□□□ -1.32
TRIM38-201ENST00000357085 POMGNT1Q8WZA1 660 aa6.78□□□□□ -1.32
TRIM38-201ENST00000357085 RIT2Q99578 217 aa6.78□□□□□ -1.32
TRIM38-201ENST00000357085 ARMCX1Q9P291 453 aa6.78□□□□□ -1.32
TRIM38-201ENST00000357085 GOLGA8SH3BPF8 625 aa6.77□□□□□ -1.32
TRIM38-201ENST00000357085 POLBP06746 335 aa6.77□□□□□ -1.32
TRIM38-201ENST00000357085 ATICP31939 592 aa6.77□□□□□ -1.32
TRIM38-201ENST00000357085 NEK3P51956 506 aa6.77□□□□□ -1.32
TRIM38-201ENST00000357085 HNRNPFP52597 415 aaKnown RBP6.77□□□□□ -1.32
TRIM38-201ENST00000357085 CHI3L2Q15782 390 aa6.77□□□□□ -1.32
TRIM38-201ENST00000357085 SEPT10Q9P0V9 454 aa6.77□□□□□ -1.32
TRIM38-201ENST00000357085 MAD2L2Q9UI95 211 aa6.77□□□□□ -1.32
TRIM38-201ENST00000357085 SLC30A1Q9Y6M5 507 aa6.77□□□□□ -1.32
TRIM38-201ENST00000357085 EMSYQ7Z589 1322 aa6.77□□□□□ -1.32
TRIM38-201ENST00000357085 EFNA5P52803 228 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 COPZ1P61923 177 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 GEN1Q17RS7 908 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 C16orf86Q6ZW13 317 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 LRRC49Q8IUZ0 686 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 PQLC1Q8N2U9 271 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 PHC3Q8NDX5 983 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 HEMGNQ9BXL5 484 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 THAP2Q9H0W7 228 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 PRM3Q9NNZ6 103 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 UBA2Q9UBT2 640 aaPredicted RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms