RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 NT5C1AQ9BXI3 368 aa11.85□□□□□ -0.51
SPTBN1-202ENST00000356805 WDCPQ9H6R7 721 aa11.85□□□□□ -0.51
SPTBN1-202ENST00000356805 POLR1AO95602 1720 aaPredicted RBP11.85□□□□□ -0.51
SPTBN1-202ENST00000356805 ALOX5P09917 674 aa11.85□□□□□ -0.51
SPTBN1-202ENST00000356805 CCDC33Q8N5R6 958 aa11.85□□□□□ -0.51
SPTBN1-202ENST00000356805 SLITRK1Q96PX8 696 aa11.85□□□□□ -0.51
SPTBN1-202ENST00000356805 GORASP1Q9BQQ3 440 aa11.85□□□□□ -0.51
SPTBN1-202ENST00000356805 TUFT1Q9NNX1 390 aa11.85□□□□□ -0.51
SPTBN1-202ENST00000356805 TRPC4Q9UBN4 977 aa11.85□□□□□ -0.51
SPTBN1-202ENST00000356805 VPS9D1Q9Y2B5 631 aa11.85□□□□□ -0.51
SPTBN1-202ENST00000356805 LCA5LO95447 670 aa11.85□□□□□ -0.51
SPTBN1-202ENST00000356805 FMR1Q06787 632 aaKnown RBP eCLIP11.85□□□□□ -0.517e-7■■■■■ 27.1
SPTBN1-202ENST00000356805 KCNMA1Q12791 1236 aa11.85□□□□□ -0.51
SPTBN1-202ENST00000356805 ITGA9Q13797 1035 aa11.85□□□□□ -0.51
SPTBN1-202ENST00000356805 RASA2Q15283 850 aa11.85□□□□□ -0.51
SPTBN1-202ENST00000356805 HLFQ16534 295 aa11.85□□□□□ -0.51
SPTBN1-202ENST00000356805 RSBN1Q5VWQ0 802 aaPredicted RBP11.85□□□□□ -0.51
SPTBN1-202ENST00000356805 ENGASEQ8NFI3 743 aa11.85□□□□□ -0.51
SPTBN1-202ENST00000356805 MROH7-TTC4A0A0A0MT08 1334 aa11.85□□□□□ -0.51
SPTBN1-202ENST00000356805 PSMD12O00232 456 aaPredicted RBP11.85□□□□□ -0.51
SPTBN1-202ENST00000356805 NUDT14O95848 222 aa11.85□□□□□ -0.51
SPTBN1-202ENST00000356805 TGM2P21980 687 aa11.85□□□□□ -0.51
SPTBN1-202ENST00000356805 GRM4Q14833 912 aa11.85□□□□□ -0.51
SPTBN1-202ENST00000356805 TIMM50Q3ZCQ8 353 aa11.85□□□□□ -0.51
SPTBN1-202ENST00000356805 ZNF618Q5T7W0 954 aa11.85□□□□□ -0.51
SPTBN1-202ENST00000356805 ZBTB49Q6ZSB9 765 aa11.85□□□□□ -0.51
SPTBN1-202ENST00000356805 ZNF398Q8TD17 642 aa11.85□□□□□ -0.51
SPTBN1-202ENST00000356805 SGF29Q96ES7 293 aa11.85□□□□□ -0.51
SPTBN1-202ENST00000356805 RMND5AQ9H871 391 aa11.85□□□□□ -0.51
SPTBN1-202ENST00000356805 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.85□□□□□ -0.51
SPTBN1-202ENST00000356805 HEG1Q9ULI3 1381 aa11.85□□□□□ -0.51
SPTBN1-202ENST00000356805 RNASEH1O60930 286 aaKnown RBP11.84□□□□□ -0.51
SPTBN1-202ENST00000356805 MAPKAPK2P49137 400 aa11.84□□□□□ -0.51
SPTBN1-202ENST00000356805 ARF5P84085 180 aa11.84□□□□□ -0.51
SPTBN1-202ENST00000356805 TTLL9Q3SXZ7 439 aa11.84□□□□□ -0.51
SPTBN1-202ENST00000356805 IRAK1BP1Q5VVH5 260 aa11.84□□□□□ -0.51
SPTBN1-202ENST00000356805 BDH2Q9BUT1 245 aa11.84□□□□□ -0.51
SPTBN1-202ENST00000356805 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.84□□□□□ -0.51
SPTBN1-202ENST00000356805 SARSP49591 514 aaKnown RBP11.84□□□□□ -0.51
SPTBN1-202ENST00000356805 ZNF177Q13360 481 aaPredicted RBP11.84□□□□□ -0.51
SPTBN1-202ENST00000356805 SNRNP35Q16560 246 aaKnown RBP11.84□□□□□ -0.51
SPTBN1-202ENST00000356805 GLB1LQ6UWU2 654 aa11.84□□□□□ -0.51
SPTBN1-202ENST00000356805 FAM45AQ8TCE6 357 aa11.84□□□□□ -0.51
SPTBN1-202ENST00000356805 ACSF2Q96CM8 615 aaPredicted RBP11.84□□□□□ -0.51
SPTBN1-202ENST00000356805 RNFT2Q96EX2 444 aa11.84□□□□□ -0.51
SPTBN1-202ENST00000356805 PRRG3Q9BZD7 231 aa11.84□□□□□ -0.51
SPTBN1-202ENST00000356805 PAIP1Q9H074 479 aaKnown RBP11.84□□□□□ -0.51
SPTBN1-202ENST00000356805 ATP10AO60312 1499 aa11.84□□□□□ -0.51
SPTBN1-202ENST00000356805 TNNI3P19429 210 aa11.84□□□□□ -0.51
SPTBN1-202ENST00000356805 C1DQ13901 141 aaKnown RBP11.84□□□□□ -0.51
SPTBN1-202ENST00000356805 AGAP9Q5VTM2 703 aa11.84□□□□□ -0.51
SPTBN1-202ENST00000356805 GATAD2AQ86YP4 633 aa11.84□□□□□ -0.51
SPTBN1-202ENST00000356805 SETD9Q8NE22 299 aa11.84□□□□□ -0.51
SPTBN1-202ENST00000356805 TPCN2Q8NHX9 752 aa11.84□□□□□ -0.51
SPTBN1-202ENST00000356805 CAMKK2Q96RR4 588 aa11.84□□□□□ -0.51
SPTBN1-202ENST00000356805 ANKZF1Q9H8Y5 726 aa11.84□□□□□ -0.51
SPTBN1-202ENST00000356805 MINPP1Q9UNW1 487 aa11.84□□□□□ -0.51
SPTBN1-202ENST00000356805 DYNC1LI2O43237 492 aaPredicted RBP11.84□□□□□ -0.51
SPTBN1-202ENST00000356805 PRKAA2P54646 552 aa11.84□□□□□ -0.51
SPTBN1-202ENST00000356805 TRAF2Q12933 501 aa11.84□□□□□ -0.51
SPTBN1-202ENST00000356805 PAN2Q504Q3 1202 aaKnown RBP11.84□□□□□ -0.51
SPTBN1-202ENST00000356805 UNC45BQ8IWX7 931 aa11.84□□□□□ -0.51
SPTBN1-202ENST00000356805 S100ZQ8WXG8 99 aa11.84□□□□□ -0.51
SPTBN1-202ENST00000356805 ERLEC1Q96DZ1 483 aa11.84□□□□□ -0.51
SPTBN1-202ENST00000356805 ROGDIQ9GZN7 287 aa11.84□□□□□ -0.51
SPTBN1-202ENST00000356805 POLR1DQ9Y2S0 133 aa11.84□□□□□ -0.51
SPTBN1-202ENST00000356805 COQ6Q9Y2Z9 468 aa11.84□□□□□ -0.51
SPTBN1-202ENST00000356805 SPTLC1O15269 473 aa11.84□□□□□ -0.51
SPTBN1-202ENST00000356805 CCNG1P51959 295 aa11.84□□□□□ -0.51
SPTBN1-202ENST00000356805 NR1H2P55055 460 aa11.84□□□□□ -0.51
SPTBN1-202ENST00000356805 DENND5BQ6ZUT9 1274 aa11.84□□□□□ -0.51
SPTBN1-202ENST00000356805 CD302Q8IX05 232 aa11.84□□□□□ -0.51
SPTBN1-202ENST00000356805 MIEF1Q9NQG6 463 aa11.84□□□□□ -0.51
SPTBN1-202ENST00000356805 IQCMA0A1B0GVH7 501 aa11.84□□□□□ -0.51
SPTBN1-202ENST00000356805 RPL5P46777 297 aaKnown RBP11.84□□□□□ -0.51
SPTBN1-202ENST00000356805 FNIP1Q8TF40 1166 aa11.84□□□□□ -0.51
SPTBN1-202ENST00000356805 GTF3C4Q9UKN8 822 aa11.84□□□□□ -0.51
SPTBN1-202ENST00000356805 CYP27B1O15528 508 aa11.84□□□□□ -0.51
SPTBN1-202ENST00000356805 CNOT3O75175 753 aaKnown RBP11.84□□□□□ -0.51
SPTBN1-202ENST00000356805 PTGER2P43116 358 aa11.84□□□□□ -0.51
SPTBN1-202ENST00000356805 FMO5P49326 533 aa11.84□□□□□ -0.51
SPTBN1-202ENST00000356805 EFCAB12Q6NXP0 572 aa11.84□□□□□ -0.51
SPTBN1-202ENST00000356805 LINC00523Q86TU6 105 aa11.84□□□□□ -0.51
SPTBN1-202ENST00000356805 KYQ8NBH2 561 aa11.84□□□□□ -0.51
SPTBN1-202ENST00000356805 AGPAT5Q9NUQ2 364 aa11.84□□□□□ -0.51
SPTBN1-202ENST00000356805 DYRK1BQ9Y463 629 aa11.84□□□□□ -0.51
SPTBN1-202ENST00000356805 NPTXRO95502 500 aa11.83□□□□□ -0.52
SPTBN1-202ENST00000356805 GPD1P21695 349 aa11.83□□□□□ -0.52
SPTBN1-202ENST00000356805 ACADSBP45954 432 aa11.83□□□□□ -0.52
SPTBN1-202ENST00000356805 RXRGP48443 463 aa11.83□□□□□ -0.52
SPTBN1-202ENST00000356805 MMRN1Q13201 1228 aa11.83□□□□□ -0.52
SPTBN1-202ENST00000356805 DGKDQ16760 1214 aa11.83□□□□□ -0.52
SPTBN1-202ENST00000356805 PDZK1Q5T2W1 519 aa11.83□□□□□ -0.52
SPTBN1-202ENST00000356805 ATAD3BQ5T9A4 648 aa11.83□□□□□ -0.52
SPTBN1-202ENST00000356805 MARK2Q7KZI7 788 aaKnown RBP11.83□□□□□ -0.52
SPTBN1-202ENST00000356805 SLC13A5Q86YT5 568 aaPredicted RBP11.83□□□□□ -0.52
SPTBN1-202ENST00000356805 SEPT12Q8IYM1 358 aa11.83□□□□□ -0.52
SPTBN1-202ENST00000356805 MDM1Q8TC05 714 aa11.83□□□□□ -0.52
SPTBN1-202ENST00000356805 TPD52L3Q96J77 140 aa11.83□□□□□ -0.52
SPTBN1-202ENST00000356805 NR5A2O00482 541 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms