RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 TRIM69Q86WT6 500 aa18.58■□□□□ 0.57
COL18A1-202ENST00000355480 MIER2Q8N344 545 aa18.58■□□□□ 0.57
COL18A1-202ENST00000355480 ZMAT2Q96NC0 199 aaKnown RBP18.58■□□□□ 0.57
COL18A1-202ENST00000355480 OSBPL10Q9BXB5 764 aa18.58■□□□□ 0.57
COL18A1-202ENST00000355480 SEMA6BQ9H3T3 888 aa18.58■□□□□ 0.57
COL18A1-202ENST00000355480 UNC13BO14795 1591 aa18.58■□□□□ 0.56
COL18A1-202ENST00000355480 DSG3P32926 999 aa18.58■□□□□ 0.56
COL18A1-202ENST00000355480 SEC24CP53992 1094 aa18.58■□□□□ 0.56
COL18A1-202ENST00000355480 CCDC60Q8IWA6 550 aaPredicted RBP18.58■□□□□ 0.56
COL18A1-202ENST00000355480 TMEM121Q9BTD3 319 aa18.58■□□□□ 0.56
COL18A1-202ENST00000355480 PACSIN1Q9BY11 444 aa18.58■□□□□ 0.56
COL18A1-202ENST00000355480 PCDHB5Q9Y5E4 795 aa18.58■□□□□ 0.56
COL18A1-202ENST00000355480 PSMA4P25789 261 aaKnown RBP18.58■□□□□ 0.56
COL18A1-202ENST00000355480 RAB27AP51159 221 aa18.58■□□□□ 0.56
COL18A1-202ENST00000355480 NME5P56597 212 aa18.58■□□□□ 0.56
COL18A1-202ENST00000355480 DAB2IPQ5VWQ8 1189 aa18.58■□□□□ 0.56
COL18A1-202ENST00000355480 MAP1SQ66K74 1059 aaPredicted RBP18.58■□□□□ 0.56
COL18A1-202ENST00000355480 CCDC81Q6ZN84 652 aa18.58■□□□□ 0.56
COL18A1-202ENST00000355480 ENGASEQ8NFI3 743 aa18.58■□□□□ 0.56
COL18A1-202ENST00000355480 CDK5RAP1Q96SZ6 601 aaKnown RBP18.58■□□□□ 0.56
COL18A1-202ENST00000355480 WDR41Q9HAD4 459 aa18.58■□□□□ 0.56
COL18A1-202ENST00000355480 DLC1Q96QB1 1528 aa18.58■□□□□ 0.56
COL18A1-202ENST00000355480 GNG14A0A1W2PPG7 69 aa18.58■□□□□ 0.56
COL18A1-202ENST00000355480 MGAT4DA6NG13 374 aa18.58■□□□□ 0.56
COL18A1-202ENST00000355480 GZMAP12544 262 aa18.58■□□□□ 0.56
COL18A1-202ENST00000355480 RAG1P15918 1043 aa18.58■□□□□ 0.56
COL18A1-202ENST00000355480 TFE3P19532 575 aaPredicted RBP18.58■□□□□ 0.56
COL18A1-202ENST00000355480 CSTF3Q12996 717 aaKnown RBP18.58■□□□□ 0.56
COL18A1-202ENST00000355480 EPS8L3Q8TE67 593 aaKnown RBP18.58■□□□□ 0.56
COL18A1-202ENST00000355480 NAT9Q9BTE0 207 aa18.58■□□□□ 0.56
COL18A1-202ENST00000355480 RRAGCQ9HB90 399 aa18.58■□□□□ 0.56
COL18A1-202ENST00000355480 UBP1Q9NZI7 540 aa18.58■□□□□ 0.56
COL18A1-202ENST00000355480 M0R3G1 203 aa18.57■□□□□ 0.56
COL18A1-202ENST00000355480 HPGDP15428 266 aa18.57■□□□□ 0.56
COL18A1-202ENST00000355480 KCNA3P22001 575 aa18.57■□□□□ 0.56
COL18A1-202ENST00000355480 MICU2Q8IYU8 434 aa18.57■□□□□ 0.56
COL18A1-202ENST00000355480 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.57■□□□□ 0.563e-9■■■■■ 26.9
COL18A1-202ENST00000355480 EDEM1Q92611 657 aa18.57■□□□□ 0.56
COL18A1-202ENST00000355480 KRCC1Q9NPI7 259 aaPredicted RBP18.57■□□□□ 0.56
COL18A1-202ENST00000355480 AKAP5P24588 427 aa18.57■□□□□ 0.56
COL18A1-202ENST00000355480 ERVK-24P63145 666 aa18.57■□□□□ 0.56
COL18A1-202ENST00000355480 PABPC3Q9H361 631 aaKnown RBP18.57■□□□□ 0.56
COL18A1-202ENST00000355480 AKT1S1Q96B36 256 aa18.57■□□□□ 0.56
COL18A1-202ENST00000355480 GPAMQ9HCL2 828 aa18.57■□□□□ 0.56
COL18A1-202ENST00000355480 XPO1O14980 1071 aaKnown RBP18.57■□□□□ 0.56
COL18A1-202ENST00000355480 KLRC2P26717 231 aa18.57■□□□□ 0.56
COL18A1-202ENST00000355480 CCR1P32246 355 aa18.57■□□□□ 0.56
COL18A1-202ENST00000355480 VMP1Q96GC9 406 aa18.57■□□□□ 0.56
COL18A1-202ENST00000355480 CCT8L1PA6NM43 557 aa18.56■□□□□ 0.56
COL18A1-202ENST00000355480 SPTLC1O15269 473 aa18.56■□□□□ 0.56
COL18A1-202ENST00000355480 CCDC159P0C7I6 412 aa18.56■□□□□ 0.56
COL18A1-202ENST00000355480 HALP42357 657 aa18.56■□□□□ 0.56
COL18A1-202ENST00000355480 C11orf63Q6NUN7 778 aa18.56■□□□□ 0.56
COL18A1-202ENST00000355480 ILDR2Q71H61 639 aa18.56■□□□□ 0.56
COL18A1-202ENST00000355480 NT5DC3Q86UY8 548 aa18.56■□□□□ 0.56
COL18A1-202ENST00000355480 SUGP1Q8IWZ8 645 aaKnown RBP18.56■□□□□ 0.56
COL18A1-202ENST00000355480 LPCAT1Q8NF37 534 aa18.56■□□□□ 0.56
COL18A1-202ENST00000355480 SLC20A1Q8WUM9 679 aa18.56■□□□□ 0.56
COL18A1-202ENST00000355480 CAB39Q9Y376 341 aaPredicted RBP18.56■□□□□ 0.56
COL18A1-202ENST00000355480 PROSCO94903 275 aa18.56■□□□□ 0.56
COL18A1-202ENST00000355480 CPSF4O95639 269 aaKnown RBP18.56■□□□□ 0.56
COL18A1-202ENST00000355480 TAL1P17542 331 aaPredicted RBP18.56■□□□□ 0.56
COL18A1-202ENST00000355480 STARD3Q14849 445 aa18.56■□□□□ 0.56
COL18A1-202ENST00000355480 PTAR1Q7Z6K3 402 aaPredicted RBP18.56■□□□□ 0.56
COL18A1-202ENST00000355480 C3orf20Q8ND61 904 aa18.56■□□□□ 0.56
COL18A1-202ENST00000355480 SMAD5Q99717 465 aaKnown RBP18.56■□□□□ 0.56
COL18A1-202ENST00000355480 CCT7Q99832 543 aa18.56■□□□□ 0.56
COL18A1-202ENST00000355480 CCDC3Q9BQI4 270 aa18.56■□□□□ 0.56
COL18A1-202ENST00000355480 KBTBD4Q9NVX7 518 aa18.56■□□□□ 0.56
COL18A1-202ENST00000355480 PHTF1Q9UMS5 762 aa18.56■□□□□ 0.56
COL18A1-202ENST00000355480 F8VZ95 297 aa18.56■□□□□ 0.56
COL18A1-202ENST00000355480 TGFB3P10600 412 aa18.56■□□□□ 0.56
COL18A1-202ENST00000355480 B3GALNT2Q8NCR0 500 aa18.56■□□□□ 0.56
COL18A1-202ENST00000355480 RPS6KB2Q9UBS0 482 aa18.56■□□□□ 0.56
COL18A1-202ENST00000355480 AKAP3O75969 853 aa18.56■□□□□ 0.56
COL18A1-202ENST00000355480 GHRP10912 638 aa18.56■□□□□ 0.56
COL18A1-202ENST00000355480 ACAT1P24752 427 aaKnown RBP18.56■□□□□ 0.56
COL18A1-202ENST00000355480 CYP2F1P24903 491 aa18.56■□□□□ 0.56
COL18A1-202ENST00000355480 KLC1Q07866 573 aa18.56■□□□□ 0.56
COL18A1-202ENST00000355480 BTG3Q14201 252 aaPredicted RBP18.56■□□□□ 0.56
COL18A1-202ENST00000355480 SV2AQ7L0J3 742 aa18.56■□□□□ 0.56
COL18A1-202ENST00000355480 CENPLQ8N0S6 344 aaPredicted RBP18.56■□□□□ 0.56
COL18A1-202ENST00000355480 TBC1D13Q9NVG8 400 aa18.56■□□□□ 0.56
COL18A1-202ENST00000355480 IFRD1O00458 451 aaPredicted RBP18.56■□□□□ 0.56
COL18A1-202ENST00000355480 CSHL1Q14406 222 aa18.56■□□□□ 0.56
COL18A1-202ENST00000355480 CELF6Q96J87 481 aaKnown RBP18.56■□□□□ 0.56
COL18A1-202ENST00000355480 TMEM39AQ9NV64 488 aa18.56■□□□□ 0.56
COL18A1-202ENST00000355480 WHRNQ9P202 907 aa18.56■□□□□ 0.56
COL18A1-202ENST00000355480 ZNF711Q9Y462 761 aa18.56■□□□□ 0.56
COL18A1-202ENST00000355480 CEP152O94986 1710 aa18.56■□□□□ 0.56
COL18A1-202ENST00000355480 RNF103O00237 685 aa18.55■□□□□ 0.56
COL18A1-202ENST00000355480 USP1O94782 785 aa18.55■□□□□ 0.56
COL18A1-202ENST00000355480 GUCA1AP43080 201 aaPredicted RBP18.55■□□□□ 0.56
COL18A1-202ENST00000355480 MCL1Q07820 350 aa18.55■□□□□ 0.56
COL18A1-202ENST00000355480 CAMKK2Q96RR4 588 aa18.55■□□□□ 0.56
COL18A1-202ENST00000355480 RBM22Q9NW64 420 aaKnown RBP eCLIP18.55■□□□□ 0.561e-6■■□□□ 11.6
COL18A1-202ENST00000355480 CEMIPQ8WUJ3 1361 aa18.55■□□□□ 0.56
COL18A1-202ENST00000355480 MANSC4A6NHS7 340 aaPredicted RBP18.55■□□□□ 0.56
COL18A1-202ENST00000355480 IGF2BP3O00425 579 aaKnown RBP eCLIP18.55■□□□□ 0.56
COL18A1-202ENST00000355480 NDUFB5O43674 189 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms