RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 EMC1Q8N766 993 aa9.74□□□□□ -0.85
SMG6-202ENST00000354901 STKLD1Q8NE28 680 aa9.74□□□□□ -0.85
SMG6-202ENST00000354901 SHKBP1Q8TBC3 707 aa9.74□□□□□ -0.85
SMG6-202ENST00000354901 TMEM174Q8WUU8 243 aa9.74□□□□□ -0.85
SMG6-202ENST00000354901 NSL1Q96IY1 281 aa9.74□□□□□ -0.85
SMG6-202ENST00000354901 CNBD2Q96M20 576 aa9.74□□□□□ -0.85
SMG6-202ENST00000354901 ARPC5LQ9BPX5 153 aa9.74□□□□□ -0.85
SMG6-202ENST00000354901 SLX1AQ9BQ83 275 aa9.74□□□□□ -0.85
SMG6-202ENST00000354901 DCUN1D5Q9BTE7 237 aa9.74□□□□□ -0.85
SMG6-202ENST00000354901 TRABDQ9H4I3 376 aa9.74□□□□□ -0.85
SMG6-202ENST00000354901 PDLIM7Q9NR12 457 aa9.74□□□□□ -0.85
SMG6-202ENST00000354901 XPO1O14980 1071 aaKnown RBP9.74□□□□□ -0.85
SMG6-202ENST00000354901 CSDE1O75534 798 aaKnown RBP9.74□□□□□ -0.85
SMG6-202ENST00000354901 GJB1P08034 283 aa9.74□□□□□ -0.85
SMG6-202ENST00000354901 PDGFRBP09619 1106 aa9.74□□□□□ -0.85
SMG6-202ENST00000354901 PCSK6P29122 969 aa9.74□□□□□ -0.85
SMG6-202ENST00000354901 RAP1GAPP47736 663 aa9.74□□□□□ -0.85
SMG6-202ENST00000354901 ATXN3P54252 364 aaPredicted RBP9.74□□□□□ -0.85
SMG6-202ENST00000354901 AP2B1P63010 937 aa9.74□□□□□ -0.85
SMG6-202ENST00000354901 GSTA3Q16772 222 aa9.74□□□□□ -0.85
SMG6-202ENST00000354901 SFT2D3Q587I9 215 aa9.74□□□□□ -0.85
SMG6-202ENST00000354901 PATL1Q86TB9 770 aaKnown RBP9.74□□□□□ -0.85
SMG6-202ENST00000354901 KATNAL2Q8IYT4 538 aa9.74□□□□□ -0.85
SMG6-202ENST00000354901 SMYD1Q8NB12 490 aa9.74□□□□□ -0.85
SMG6-202ENST00000354901 EXD1Q8NHP7 514 aa9.74□□□□□ -0.85
SMG6-202ENST00000354901 PPP2R3CQ969Q6 453 aa9.74□□□□□ -0.85
SMG6-202ENST00000354901 TAS2R1Q9NYW7 299 aa9.74□□□□□ -0.85
SMG6-202ENST00000354901 PPARGC1AQ9UBK2 798 aaKnown RBP9.74□□□□□ -0.85
SMG6-202ENST00000354901 ZNF212Q9UDV6 495 aa9.74□□□□□ -0.85
SMG6-202ENST00000354901 PACSIN3Q9UKS6 424 aa9.74□□□□□ -0.85
SMG6-202ENST00000354901 EFR3BQ9Y2G0 817 aa9.74□□□□□ -0.85
SMG6-202ENST00000354901 TMEM98Q9Y2Y6 226 aa9.74□□□□□ -0.85
SMG6-202ENST00000354901 SCINQ9Y6U3 715 aa9.74□□□□□ -0.85
SMG6-202ENST00000354901 DICER1Q9UPY3 1922 aaKnown RBP9.74□□□□□ -0.85
SMG6-202ENST00000354901 A0A1W2PPM1 405 aa9.73□□□□□ -0.85
SMG6-202ENST00000354901 LIASO43766 372 aa9.73□□□□□ -0.85
SMG6-202ENST00000354901 RGS2P41220 211 aa9.73□□□□□ -0.85
SMG6-202ENST00000354901 GMPSP49915 693 aaPredicted RBP9.73□□□□□ -0.85
SMG6-202ENST00000354901 CAV1Q03135 178 aa9.73□□□□□ -0.85
SMG6-202ENST00000354901 ZNF252P-AS1Q0IIN9 211 aa9.73□□□□□ -0.85
SMG6-202ENST00000354901 TRPC3Q13507 836 aa9.73□□□□□ -0.85
SMG6-202ENST00000354901 EFTUD2Q15029 972 aaKnown RBP eCLIP9.73□□□□□ -0.85
SMG6-202ENST00000354901 SLC1A5Q15758 541 aa9.73□□□□□ -0.85
SMG6-202ENST00000354901 TMEM259Q4ZIN3 620 aa9.73□□□□□ -0.85
SMG6-202ENST00000354901 PLEKHA7Q6IQ23 1121 aa9.73□□□□□ -0.85
SMG6-202ENST00000354901 SYDE1Q6ZW31 735 aaPredicted RBP9.73□□□□□ -0.85
SMG6-202ENST00000354901 LRRC6Q86X45 466 aa9.73□□□□□ -0.85
SMG6-202ENST00000354901 RDM1Q8NG50 284 aa9.73□□□□□ -0.85
SMG6-202ENST00000354901 OR6Y1Q8NGX8 325 aa9.73□□□□□ -0.85
SMG6-202ENST00000354901 C10orf82Q8WW14 230 aa9.73□□□□□ -0.85
SMG6-202ENST00000354901 CASP10Q92851 521 aa9.73□□□□□ -0.85
SMG6-202ENST00000354901 MTBPQ96DY7 904 aa9.73□□□□□ -0.85
SMG6-202ENST00000354901 DHRS1Q96LJ7 313 aa9.73□□□□□ -0.85
SMG6-202ENST00000354901 SLITRK1Q96PX8 696 aa9.73□□□□□ -0.85
SMG6-202ENST00000354901 ACAD9Q9H845 621 aa9.73□□□□□ -0.85
SMG6-202ENST00000354901 KIAA1586Q9HCI6 787 aa9.73□□□□□ -0.85
SMG6-202ENST00000354901 HTR3EA5X5Y0 456 aa9.73□□□□□ -0.85
SMG6-202ENST00000354901 PTPRAP18433 802 aa9.73□□□□□ -0.85
SMG6-202ENST00000354901 PEX2P28328 305 aa9.73□□□□□ -0.85
SMG6-202ENST00000354901 SSTR1P30872 391 aa9.73□□□□□ -0.85
SMG6-202ENST00000354901 STT3AP46977 705 aa9.73□□□□□ -0.85
SMG6-202ENST00000354901 EIF2B2P49770 351 aaKnown RBP9.73□□□□□ -0.85
SMG6-202ENST00000354901 KPNA1P52294 538 aaPredicted RBP9.73□□□□□ -0.85
SMG6-202ENST00000354901 PDK3Q15120 406 aa9.73□□□□□ -0.85
SMG6-202ENST00000354901 NADK2Q4G0N4 442 aa9.73□□□□□ -0.85
SMG6-202ENST00000354901 CMPK2Q5EBM0 449 aa9.73□□□□□ -0.85
SMG6-202ENST00000354901 RABGAP1LQ5R372 815 aa9.73□□□□□ -0.85
SMG6-202ENST00000354901 TFAP2BQ92481 460 aa9.73□□□□□ -0.85
SMG6-202ENST00000354901 CLIP3Q96DZ5 547 aa9.73□□□□□ -0.85
SMG6-202ENST00000354901 PRPF18Q99633 342 aaKnown RBP9.73□□□□□ -0.85
SMG6-202ENST00000354901 CGRRF1Q99675 332 aa9.73□□□□□ -0.85
SMG6-202ENST00000354901 TEX13BQ9BXU2 312 aa9.73□□□□□ -0.85
SMG6-202ENST00000354901 PORCNQ9H237 461 aa9.73□□□□□ -0.85
SMG6-202ENST00000354901 CISHQ9NSE2 258 aa9.73□□□□□ -0.85
SMG6-202ENST00000354901 MAP3K20Q9NYL2 800 aaKnown RBP9.73□□□□□ -0.85
SMG6-202ENST00000354901 IP6K2Q9UHH9 426 aa9.73□□□□□ -0.85
SMG6-202ENST00000354901 CLEC11AQ9Y240 323 aa9.73□□□□□ -0.85
SMG6-202ENST00000354901 PPP2R3BQ9Y5P8 575 aa9.73□□□□□ -0.85
SMG6-202ENST00000354901 KRT38O76015 456 aa9.73□□□□□ -0.85
SMG6-202ENST00000354901 KLRC2P26717 231 aa9.73□□□□□ -0.85
SMG6-202ENST00000354901 CDH8P55286 799 aa9.73□□□□□ -0.85
SMG6-202ENST00000354901 GHRHRQ02643 423 aa9.73□□□□□ -0.85
SMG6-202ENST00000354901 PTP4A2Q12974 167 aa9.73□□□□□ -0.85
SMG6-202ENST00000354901 CAPSQ13938 189 aa9.73□□□□□ -0.85
SMG6-202ENST00000354901 STAT4Q14765 748 aa9.73□□□□□ -0.85
SMG6-202ENST00000354901 PLEKHG4Q58EX7 1191 aa9.73□□□□□ -0.85
SMG6-202ENST00000354901 SPOCD1Q6ZMY3 1216 aa9.73□□□□□ -0.85
SMG6-202ENST00000354901 SIX5Q8N196 739 aa9.73□□□□□ -0.85
SMG6-202ENST00000354901 GSTCDQ8NEC7 633 aa9.73□□□□□ -0.85
SMG6-202ENST00000354901 CFAP57Q96MR6 1250 aa9.73□□□□□ -0.85
SMG6-202ENST00000354901 GRID1Q9ULK0 1009 aa9.73□□□□□ -0.85
SMG6-202ENST00000354901 C15orf38-AP3S2A0A0A6YYH1 394 aa9.72□□□□□ -0.85
SMG6-202ENST00000354901 A0A0B4J269 797 aa9.72□□□□□ -0.85
SMG6-202ENST00000354901 DNALI1O14645 258 aaPredicted RBP9.72□□□□□ -0.85
SMG6-202ENST00000354901 PABPC4LP0CB38 370 aaKnown RBP9.72□□□□□ -0.85
SMG6-202ENST00000354901 MMP8P22894 467 aa9.72□□□□□ -0.85
SMG6-202ENST00000354901 ADRA1DP25100 572 aa9.72□□□□□ -0.85
SMG6-202ENST00000354901 PSMA2P25787 234 aa9.72□□□□□ -0.85
SMG6-202ENST00000354901 HOXD11P31277 338 aaPredicted RBP9.72□□□□□ -0.85
SMG6-202ENST00000354901 SH3BGRP55822 239 aaPredicted RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms