RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 TRPM5Q9NZQ8 1165 aa10.29□□□□□ -0.76
COL11A1-201ENST00000353414 ADM5C9JUS6 153 aa10.29□□□□□ -0.76
COL11A1-201ENST00000353414 LBPP18428 481 aa10.29□□□□□ -0.76
COL11A1-201ENST00000353414 KLRC1P26715 233 aa10.29□□□□□ -0.76
COL11A1-201ENST00000353414 C16orf46Q6P387 395 aa10.29□□□□□ -0.76
COL11A1-201ENST00000353414 DNAJC14Q6Y2X3 702 aaPredicted RBP10.29□□□□□ -0.76
COL11A1-201ENST00000353414 C3orf67Q6ZVT6 689 aa10.29□□□□□ -0.76
COL11A1-201ENST00000353414 WDR36Q8NI36 951 aaKnown RBP10.29□□□□□ -0.76
COL11A1-201ENST00000353414 WDR24Q96S15 920 aa10.29□□□□□ -0.76
COL11A1-201ENST00000353414 MANSC1Q9H8J5 431 aa10.29□□□□□ -0.76
COL11A1-201ENST00000353414 RIC8BQ9NVN3 520 aa10.29□□□□□ -0.76
COL11A1-201ENST00000353414 THG1LQ9NWX6 298 aaKnown RBP10.29□□□□□ -0.76
COL11A1-201ENST00000353414 DDX43Q9NXZ2 648 aaKnown RBP10.29□□□□□ -0.76
COL11A1-201ENST00000353414 TNS3Q68CZ2 1445 aa10.29□□□□□ -0.76
COL11A1-201ENST00000353414 PDHXO00330 501 aa10.29□□□□□ -0.76
COL11A1-201ENST00000353414 ACSL4O60488 711 aa10.29□□□□□ -0.76
COL11A1-201ENST00000353414 BAIAP3O94812 1187 aa10.29□□□□□ -0.76
COL11A1-201ENST00000353414 UCHL3P15374 230 aa10.29□□□□□ -0.76
COL11A1-201ENST00000353414 SLC15A2Q16348 729 aa10.29□□□□□ -0.76
COL11A1-201ENST00000353414 TTLL9Q3SXZ7 439 aa10.29□□□□□ -0.76
COL11A1-201ENST00000353414 C11orf63Q6NUN7 778 aa10.29□□□□□ -0.76
COL11A1-201ENST00000353414 MB21D2Q8IYB1 491 aaPredicted RBP10.29□□□□□ -0.76
COL11A1-201ENST00000353414 EMC1Q8N766 993 aa10.29□□□□□ -0.76
COL11A1-201ENST00000353414 SPATA4Q8NEY3 305 aa10.29□□□□□ -0.76
COL11A1-201ENST00000353414 ERP27Q96DN0 273 aa10.29□□□□□ -0.76
COL11A1-201ENST00000353414 SEPHS2Q99611 448 aa10.29□□□□□ -0.76
COL11A1-201ENST00000353414 RUSC1Q9BVN2 902 aa10.29□□□□□ -0.76
COL11A1-201ENST00000353414 PRR36Q9H6K5 1346 aa10.29□□□□□ -0.76
COL11A1-201ENST00000353414 IQSEC2Q5JU85 1478 aa10.29□□□□□ -0.76
COL11A1-201ENST00000353414 OR6A2O95222 327 aa10.29□□□□□ -0.76
COL11A1-201ENST00000353414 CYP2C8P10632 490 aa10.29□□□□□ -0.76
COL11A1-201ENST00000353414 SLC1A1P43005 524 aa10.29□□□□□ -0.76
COL11A1-201ENST00000353414 PLA2G4EQ3MJ16 856 aa10.29□□□□□ -0.76
COL11A1-201ENST00000353414 NBPF12Q5TAG4 269 aaPredicted RBP10.29□□□□□ -0.76
COL11A1-201ENST00000353414 EFL1Q7Z2Z2 1120 aaKnown RBP10.29□□□□□ -0.76
COL11A1-201ENST00000353414 KCNB2Q92953 911 aa10.29□□□□□ -0.76
COL11A1-201ENST00000353414 VCPKMTQ9H867 229 aa10.29□□□□□ -0.76
COL11A1-201ENST00000353414 PLEKHG2Q9H7P9 1386 aa10.29□□□□□ -0.76
COL11A1-201ENST00000353414 XRCC4Q13426 336 aa10.29□□□□□ -0.76
COL11A1-201ENST00000353414 DHX34Q14147 1143 aaKnown RBP10.29□□□□□ -0.76
COL11A1-201ENST00000353414 FGD3Q5JSP0 725 aa10.29□□□□□ -0.76
COL11A1-201ENST00000353414 SLFN11Q7Z7L1 901 aa10.29□□□□□ -0.76
COL11A1-201ENST00000353414 FMR1NBQ8N0W7 255 aaPredicted RBP10.29□□□□□ -0.76
COL11A1-201ENST00000353414 TTC39CQ8N584 583 aa10.29□□□□□ -0.76
COL11A1-201ENST00000353414 BBS4Q96RK4 519 aa10.29□□□□□ -0.76
COL11A1-201ENST00000353414 TMCC3Q9ULS5 477 aa10.29□□□□□ -0.76
COL11A1-201ENST00000353414 A0A087WZ62 844 aa10.28□□□□□ -0.76
COL11A1-201ENST00000353414 PVALEFA0A1B0GWK0 134 aa10.28□□□□□ -0.76
COL11A1-201ENST00000353414 TEX28O15482 410 aa10.28□□□□□ -0.76
COL11A1-201ENST00000353414 FAM86B2P0C5J1 330 aa10.28□□□□□ -0.76
COL11A1-201ENST00000353414 KCNA3P22001 575 aa10.28□□□□□ -0.76
COL11A1-201ENST00000353414 KLC1Q07866 573 aa10.28□□□□□ -0.76
COL11A1-201ENST00000353414 STRA8Q7Z7C7 330 aa10.28□□□□□ -0.76
COL11A1-201ENST00000353414 ARRDC4Q8NCT1 418 aa10.28□□□□□ -0.76
COL11A1-201ENST00000353414 FDXACB1Q9BRP7 624 aaPredicted RBP10.28□□□□□ -0.76
COL11A1-201ENST00000353414 CYLDQ9NQC7 956 aa10.28□□□□□ -0.76
COL11A1-201ENST00000353414 TBX20Q9UMR3 447 aa10.28□□□□□ -0.76
COL11A1-201ENST00000353414 NCKAP1Q9Y2A7 1128 aa10.28□□□□□ -0.76
COL11A1-201ENST00000353414 FAM187AA6NFU0 413 aa10.28□□□□□ -0.76
COL11A1-201ENST00000353414 MEI4A8MW99 385 aa10.28□□□□□ -0.76
COL11A1-201ENST00000353414 RAD51CO43502 376 aa10.28□□□□□ -0.76
COL11A1-201ENST00000353414 PLEKP08567 350 aaPredicted RBP10.28□□□□□ -0.76
COL11A1-201ENST00000353414 ITGA3P26006 1051 aa10.28□□□□□ -0.76
COL11A1-201ENST00000353414 ATP2C1P98194 919 aaPredicted RBP10.28□□□□□ -0.76
COL11A1-201ENST00000353414 DNAJC3Q13217 504 aa10.28□□□□□ -0.76
COL11A1-201ENST00000353414 NFYCQ13952 458 aa10.28□□□□□ -0.76
COL11A1-201ENST00000353414 DENND1BQ6P3S1 775 aa10.28□□□□□ -0.76
COL11A1-201ENST00000353414 LRRC8DQ7L1W4 858 aa10.28□□□□□ -0.76
COL11A1-201ENST00000353414 GPR152Q8TDT2 470 aa10.28□□□□□ -0.76
COL11A1-201ENST00000353414 FAM172AQ8WUF8 416 aa10.28□□□□□ -0.76
COL11A1-201ENST00000353414 STAMBPL1Q96FJ0 436 aa10.28□□□□□ -0.76
COL11A1-201ENST00000353414 CATSPER2Q96P56 530 aa10.28□□□□□ -0.76
COL11A1-201ENST00000353414 OLFM3Q96PB7 478 aa10.28□□□□□ -0.76
COL11A1-201ENST00000353414 MRPS26Q9BYN8 205 aaKnown RBP10.28□□□□□ -0.76
COL11A1-201ENST00000353414 MTFR1LQ9H019 292 aa10.28□□□□□ -0.76
COL11A1-201ENST00000353414 SPG21Q9NZD8 308 aa10.28□□□□□ -0.76
COL11A1-201ENST00000353414 LYVE1Q9Y5Y7 322 aa10.28□□□□□ -0.76
COL11A1-201ENST00000353414 ADGRL2O95490 1459 aa10.28□□□□□ -0.76
COL11A1-201ENST00000353414 TMEM150BA6NC51 233 aa10.28□□□□□ -0.76
COL11A1-201ENST00000353414 TK2O00142 265 aa10.28□□□□□ -0.76
COL11A1-201ENST00000353414 TRIM13O60858 407 aa10.28□□□□□ -0.76
COL11A1-201ENST00000353414 OR1E1P30953 314 aa10.28□□□□□ -0.76
COL11A1-201ENST00000353414 CRYMQ14894 314 aa10.28□□□□□ -0.76
COL11A1-201ENST00000353414 TRAPPC5Q8IUR0 188 aa10.28□□□□□ -0.76
COL11A1-201ENST00000353414 ATG16L2Q8NAA4 619 aa10.28□□□□□ -0.76
COL11A1-201ENST00000353414 OR10G6Q8NH81 332 aa10.28□□□□□ -0.76
COL11A1-201ENST00000353414 LCMT1Q9UIC8 334 aa10.28□□□□□ -0.76
COL11A1-201ENST00000353414 FAM86B1E9PN63 330 aa10.28□□□□□ -0.76
COL11A1-201ENST00000353414 AP3B1O00203 1094 aa10.28□□□□□ -0.76
COL11A1-201ENST00000353414 KLHL41O60662 606 aa10.28□□□□□ -0.76
COL11A1-201ENST00000353414 CDC42EP1Q00587 391 aa10.28□□□□□ -0.76
COL11A1-201ENST00000353414 STAT4Q14765 748 aa10.28□□□□□ -0.76
COL11A1-201ENST00000353414 CEP68Q76N32 757 aa10.28□□□□□ -0.76
COL11A1-201ENST00000353414 BPIFA1Q9NP55 256 aa10.28□□□□□ -0.76
COL11A1-201ENST00000353414 O00370 1275 aa10.28□□□□□ -0.76
COL11A1-201ENST00000353414 CHUKO15111 745 aa10.28□□□□□ -0.76
COL11A1-201ENST00000353414 EIF2B5Q13144 721 aaKnown RBP10.28□□□□□ -0.76
COL11A1-201ENST00000353414 KCTD19Q17RG1 926 aaPredicted RBP10.28□□□□□ -0.76
COL11A1-201ENST00000353414 AGAP9Q5VTM2 703 aa10.28□□□□□ -0.76
COL11A1-201ENST00000353414 OMA1Q96E52 524 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms