RNA–Protein interactions for RNA: ENST00000352260.11

SPNS1-204, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 1 (best) BASIC

Gene SPNS1, Length 1,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-204ENST00000352260 PDLIM1O00151 329 aa19.41■□□□□ 0.7
SPNS1-204ENST00000352260 SPTLC1O15269 473 aa19.41■□□□□ 0.7
SPNS1-204ENST00000352260 CHRNA1P02708 482 aa19.41■□□□□ 0.7
SPNS1-204ENST00000352260 KRT1P04264 644 aa19.41■□□□□ 0.7
SPNS1-204ENST00000352260 ASGR1P07306 291 aa19.41■□□□□ 0.7
SPNS1-204ENST00000352260 PRKAR2AP13861 404 aaKnown RBP19.41■□□□□ 0.7
SPNS1-204ENST00000352260 ITIH2P19823 946 aa19.41■□□□□ 0.7
SPNS1-204ENST00000352260 MGAT3Q09327 533 aa19.41■□□□□ 0.7
SPNS1-204ENST00000352260 MGAT5Q09328 741 aa19.41■□□□□ 0.7
SPNS1-204ENST00000352260 LRRC14Q15048 493 aa19.41■□□□□ 0.7
SPNS1-204ENST00000352260 PPP1R26Q5T8A7 1209 aaPredicted RBP19.41■□□□□ 0.7
SPNS1-204ENST00000352260 CGB2Q6NT52 195 aa19.41■□□□□ 0.7
SPNS1-204ENST00000352260 UNC93AQ86WB7 457 aa19.41■□□□□ 0.7
SPNS1-204ENST00000352260 FNIP1Q8TF40 1166 aa19.41■□□□□ 0.7
SPNS1-204ENST00000352260 RBM41Q96IZ5 413 aaKnown RBP19.41■□□□□ 0.7
SPNS1-204ENST00000352260 DCLK3Q9C098 648 aa19.41■□□□□ 0.7
SPNS1-204ENST00000352260 GOLGA2P5Q9HBQ8 144 aa19.41■□□□□ 0.7
SPNS1-204ENST00000352260 STOML1Q9UBI4 398 aa19.41■□□□□ 0.7
SPNS1-204ENST00000352260 NKX1-2Q9UD57 310 aaPredicted RBP19.41■□□□□ 0.7
SPNS1-204ENST00000352260 ST3GAL5Q9UNP4 418 aa19.41■□□□□ 0.7
SPNS1-204ENST00000352260 LRCH1Q9Y2L9 728 aa19.41■□□□□ 0.7
SPNS1-204ENST00000352260 BRAFP15056 766 aa19.41■□□□□ 0.7
SPNS1-204ENST00000352260 NR1H3Q13133 447 aa19.41■□□□□ 0.7
SPNS1-204ENST00000352260 KCNA10Q16322 511 aa19.41■□□□□ 0.7
SPNS1-204ENST00000352260 TRIM68Q6AZZ1 485 aa19.41■□□□□ 0.7
SPNS1-204ENST00000352260 TXNRD3NBQ6F5E7 133 aa19.41■□□□□ 0.7
SPNS1-204ENST00000352260 SDCCAG8Q86SQ7 713 aaPredicted RBP19.41■□□□□ 0.7
SPNS1-204ENST00000352260 VSIG1Q86XK7 387 aa19.41■□□□□ 0.7
SPNS1-204ENST00000352260 RCOR2Q8IZ40 523 aa19.41■□□□□ 0.7
SPNS1-204ENST00000352260 ANKLE1Q8NAG6 615 aa19.41■□□□□ 0.7
SPNS1-204ENST00000352260 FAM13CQ8NE31 585 aa19.41■□□□□ 0.7
SPNS1-204ENST00000352260 OR6B3Q8NGW1 331 aa19.41■□□□□ 0.7
SPNS1-204ENST00000352260 ATG4AQ8WYN0 398 aa19.41■□□□□ 0.7
SPNS1-204ENST00000352260 SLITRK1Q96PX8 696 aa19.41■□□□□ 0.7
SPNS1-204ENST00000352260 NUDCD1Q96RS6 583 aa19.41■□□□□ 0.7
SPNS1-204ENST00000352260 PITPNM3Q9BZ71 974 aa19.41■□□□□ 0.7
SPNS1-204ENST00000352260 KCNK9Q9NPC2 374 aa19.41■□□□□ 0.7
SPNS1-204ENST00000352260 UBN1Q9NPG3 1134 aa19.41■□□□□ 0.7
SPNS1-204ENST00000352260 R3HDM2Q9Y2K5 976 aaKnown RBP19.41■□□□□ 0.7
SPNS1-204ENST00000352260 PI4K2BG5E9Z4 385 aa19.4■□□□□ 0.7
SPNS1-204ENST00000352260 PTGESO14684 152 aa19.4■□□□□ 0.7
SPNS1-204ENST00000352260 TTC4O95801 387 aa19.4■□□□□ 0.7
SPNS1-204ENST00000352260 PNPLA4P41247 253 aa19.4■□□□□ 0.7
SPNS1-204ENST00000352260 TAF6P49848 677 aa19.4■□□□□ 0.7
SPNS1-204ENST00000352260 NFX1Q12986 1120 aaKnown RBP19.4■□□□□ 0.7
SPNS1-204ENST00000352260 SNX1Q13596 522 aa19.4■□□□□ 0.7
SPNS1-204ENST00000352260 PKDCCQ504Y2 493 aa19.4■□□□□ 0.7
SPNS1-204ENST00000352260 CCSAPQ6IQ19 270 aaPredicted RBP19.4■□□□□ 0.7
SPNS1-204ENST00000352260 CEP128Q6ZU80 1094 aa19.4■□□□□ 0.7
SPNS1-204ENST00000352260 TTC30AQ86WT1 665 aa19.4■□□□□ 0.7
SPNS1-204ENST00000352260 EMC1Q8N766 993 aa19.4■□□□□ 0.7
SPNS1-204ENST00000352260 MGARPQ8TDB4 240 aa19.4■□□□□ 0.7
SPNS1-204ENST00000352260 KCNV2Q8TDN2 545 aa19.4■□□□□ 0.7
SPNS1-204ENST00000352260 KBTBD7Q8WVZ9 684 aa19.4■□□□□ 0.7
SPNS1-204ENST00000352260 CCDC28BQ9BUN5 200 aa19.4■□□□□ 0.7
SPNS1-204ENST00000352260 FAM192AQ9GZU8 254 aa19.4■□□□□ 0.7
SPNS1-204ENST00000352260 FAM49BQ9NUQ9 324 aa19.4■□□□□ 0.7
SPNS1-204ENST00000352260 GDAP2Q9NXN4 497 aa19.4■□□□□ 0.7
SPNS1-204ENST00000352260 TRIM33Q9UPN9 1127 aa19.4■□□□□ 0.7
SPNS1-204ENST00000352260 PTPN22Q9Y2R2 807 aa19.4■□□□□ 0.7
SPNS1-204ENST00000352260 KPNA7A9QM74 516 aa19.39■□□□□ 0.7
SPNS1-204ENST00000352260 HCRTO43612 131 aa19.39■□□□□ 0.7
SPNS1-204ENST00000352260 CDH16O75309 829 aa19.39■□□□□ 0.7
SPNS1-204ENST00000352260 ECEL1O95672 775 aa19.39■□□□□ 0.7
SPNS1-204ENST00000352260 FGFR1P11362 822 aa19.39■□□□□ 0.7
SPNS1-204ENST00000352260 TAC1P20366 129 aa19.39■□□□□ 0.7
SPNS1-204ENST00000352260 SP100P23497 879 aaPredicted RBP19.39■□□□□ 0.7
SPNS1-204ENST00000352260 SF3A3Q12874 501 aaKnown RBP eCLIP19.39■□□□□ 0.71e-7■■■■□ 19.8
SPNS1-204ENST00000352260 LONRF1Q17RB8 773 aa19.39■□□□□ 0.7
SPNS1-204ENST00000352260 RHBDF2Q6PJF5 856 aa19.39■□□□□ 0.7
SPNS1-204ENST00000352260 ARFGAP1Q8N6T3 406 aa19.39■□□□□ 0.7
SPNS1-204ENST00000352260 FAM136AQ96C01 138 aa19.39■□□□□ 0.7
SPNS1-204ENST00000352260 IFT43Q96FT9 208 aa19.39■□□□□ 0.7
SPNS1-204ENST00000352260 LRRC37BQ96QE4 947 aa19.39■□□□□ 0.7
SPNS1-204ENST00000352260 MYLK2Q9H1R3 596 aa19.39■□□□□ 0.7
SPNS1-204ENST00000352260 DPEP3Q9H4B8 488 aa19.39■□□□□ 0.7
SPNS1-204ENST00000352260 LNPEPQ9UIQ6 1025 aa19.39■□□□□ 0.7
SPNS1-204ENST00000352260 A8MXQ7 604 aa19.39■□□□□ 0.69
SPNS1-204ENST00000352260 E5RJQ4 531 aa19.39■□□□□ 0.69
SPNS1-204ENST00000352260 CST5P28325 142 aaPredicted RBP19.39■□□□□ 0.69
SPNS1-204ENST00000352260 CETN2P41208 172 aa19.39■□□□□ 0.69
SPNS1-204ENST00000352260 OCRLQ01968 901 aa19.39■□□□□ 0.69
SPNS1-204ENST00000352260 SLC25A11Q02978 314 aaKnown RBP19.39■□□□□ 0.69
SPNS1-204ENST00000352260 SV2CQ496J9 727 aa19.39■□□□□ 0.69
SPNS1-204ENST00000352260 ZFYVE27Q5T4F4 411 aa19.39■□□□□ 0.69
SPNS1-204ENST00000352260 MFSD7Q6UXD7 560 aa19.39■□□□□ 0.69
SPNS1-204ENST00000352260 PPP1R10Q96QC0 940 aaKnown RBP19.39■□□□□ 0.69
SPNS1-204ENST00000352260 LPIN3Q9BQK8 851 aa19.39■□□□□ 0.69
SPNS1-204ENST00000352260 CCDC77Q9BR77 488 aa19.39■□□□□ 0.69
SPNS1-204ENST00000352260 SAR1AQ9NR31 198 aa19.39■□□□□ 0.69
SPNS1-204ENST00000352260 FAM105AQ9NUU6 356 aa19.39■□□□□ 0.69
SPNS1-204ENST00000352260 DDX56Q9NY93 547 aaKnown RBP19.39■□□□□ 0.69
SPNS1-204ENST00000352260 SCOCQ9UIL1 159 aa19.39■□□□□ 0.69
SPNS1-204ENST00000352260 PIK3R2O00459 728 aa19.38■□□□□ 0.69
SPNS1-204ENST00000352260 LRCH4O75427 683 aa19.38■□□□□ 0.69
SPNS1-204ENST00000352260 LRPAP1P30533 357 aa19.38■□□□□ 0.69
SPNS1-204ENST00000352260 VHLP40337 213 aa19.38■□□□□ 0.69
SPNS1-204ENST00000352260 PTDSS1P48651 473 aaKnown RBP19.38■□□□□ 0.69
SPNS1-204ENST00000352260 RGS7P49802 495 aa19.38■□□□□ 0.69
SPNS1-204ENST00000352260 FAM102AQ5T9C2 384 aaPredicted RBP19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms