RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 ANXA9O76027 345 aa14.18□□□□□ -0.14
SMC6-201ENST00000351948 FAM183BPQ6ZVS7 135 aa14.18□□□□□ -0.14
SMC6-201ENST00000351948 NLRP14Q86W24 1093 aa14.18□□□□□ -0.14
SMC6-201ENST00000351948 FAM71AQ8IYT1 594 aa14.18□□□□□ -0.14
SMC6-201ENST00000351948 LGI2Q8N0V4 545 aa14.18□□□□□ -0.14
SMC6-201ENST00000351948 SPATA20Q8TB22 786 aa14.18□□□□□ -0.14
SMC6-201ENST00000351948 CRLS1Q9UJA2 301 aa14.18□□□□□ -0.14
SMC6-201ENST00000351948 TMEM120BA0PK00 339 aa14.17□□□□□ -0.14
SMC6-201ENST00000351948 H0Y3Z8 333 aa14.17□□□□□ -0.14
SMC6-201ENST00000351948 RARAP10276 462 aa14.17□□□□□ -0.14
SMC6-201ENST00000351948 FMO1Q01740 532 aa14.17□□□□□ -0.14
SMC6-201ENST00000351948 FSTL1Q12841 308 aa14.17□□□□□ -0.14
SMC6-201ENST00000351948 ZC3H12AQ5D1E8 599 aaKnown RBP14.17□□□□□ -0.14
SMC6-201ENST00000351948 SHC3Q92529 594 aa14.17□□□□□ -0.14
SMC6-201ENST00000351948 ZNF558Q96NG5 402 aa14.17□□□□□ -0.14
SMC6-201ENST00000351948 DHX33Q9H6R0 707 aaKnown RBP14.17□□□□□ -0.14
SMC6-201ENST00000351948 SMIM35A0A1B0GVV1 85 aa14.17□□□□□ -0.14
SMC6-201ENST00000351948 PSMD3O43242 534 aa14.17□□□□□ -0.14
SMC6-201ENST00000351948 USP12O75317 370 aa14.17□□□□□ -0.14
SMC6-201ENST00000351948 CTNNB1P35222 781 aa14.17□□□□□ -0.14
SMC6-201ENST00000351948 MARCKSL1P49006 195 aa14.17□□□□□ -0.14
SMC6-201ENST00000351948 RFX8Q6ZV50 586 aa14.17□□□□□ -0.14
SMC6-201ENST00000351948 C3orf20Q8ND61 904 aa14.17□□□□□ -0.14
SMC6-201ENST00000351948 MYLPFQ96A32 169 aa14.17□□□□□ -0.14
SMC6-201ENST00000351948 L2HGDHQ9H9P8 463 aa14.17□□□□□ -0.14
SMC6-201ENST00000351948 TXLNGQ9NUQ3 528 aa14.17□□□□□ -0.14
SMC6-201ENST00000351948 SLC4A7Q9Y6M7 1214 aa14.17□□□□□ -0.14
SMC6-201ENST00000351948 SMIM28A0A1B0GU29 152 aa14.17□□□□□ -0.14
SMC6-201ENST00000351948 TRDMT1O14717 391 aaKnown RBP14.17□□□□□ -0.14
SMC6-201ENST00000351948 NPR3P17342 541 aa14.17□□□□□ -0.14
SMC6-201ENST00000351948 POU6F1Q14863 301 aa14.17□□□□□ -0.14
SMC6-201ENST00000351948 BMT2Q1RMZ1 405 aa14.17□□□□□ -0.14
SMC6-201ENST00000351948 ZNF467Q7Z7K2 595 aaPredicted RBP14.17□□□□□ -0.14
SMC6-201ENST00000351948 COLGALT1Q8NBJ5 622 aa14.17□□□□□ -0.14
SMC6-201ENST00000351948 ACTRT1Q8TDG2 376 aa14.17□□□□□ -0.14
SMC6-201ENST00000351948 POPDC2Q9HBU9 364 aa14.17□□□□□ -0.14
SMC6-201ENST00000351948 DNPEPQ9ULA0 475 aa14.17□□□□□ -0.14
SMC6-201ENST00000351948 PCDHB8Q9UN66 801 aa14.17□□□□□ -0.14
SMC6-201ENST00000351948 KCNA4P22459 653 aa14.17□□□□□ -0.14
SMC6-201ENST00000351948 SPRP35270 261 aaPredicted RBP14.17□□□□□ -0.14
SMC6-201ENST00000351948 GRM5P41594 1212 aa14.17□□□□□ -0.14
SMC6-201ENST00000351948 RTP1P59025 263 aa14.17□□□□□ -0.14
SMC6-201ENST00000351948 PPP1R26Q5T8A7 1209 aaPredicted RBP14.17□□□□□ -0.14
SMC6-201ENST00000351948 TMEM199Q8N511 208 aa14.17□□□□□ -0.14
SMC6-201ENST00000351948 CHST7Q9NS84 486 aa14.17□□□□□ -0.14
SMC6-201ENST00000351948 ZNF536O15090 1300 aa14.17□□□□□ -0.14
SMC6-201ENST00000351948 A8MX80 341 aa14.16□□□□□ -0.14
SMC6-201ENST00000351948 SEPT4O43236 478 aa14.16□□□□□ -0.14
SMC6-201ENST00000351948 AGTP01019 485 aa14.16□□□□□ -0.14
SMC6-201ENST00000351948 MAMLD1Q13495 774 aa14.16□□□□□ -0.14
SMC6-201ENST00000351948 UGP2Q16851 508 aa14.16□□□□□ -0.14
SMC6-201ENST00000351948 PPM1LQ5SGD2 360 aa14.16□□□□□ -0.14
SMC6-201ENST00000351948 TEPSINQ96N21 525 aa14.16□□□□□ -0.14
SMC6-201ENST00000351948 DRC3Q9H069 523 aa14.16□□□□□ -0.14
SMC6-201ENST00000351948 MRPL17Q9NRX2 175 aaKnown RBP14.16□□□□□ -0.14
SMC6-201ENST00000351948 MARCH2Q9P0N8 246 aa14.16□□□□□ -0.14
SMC6-201ENST00000351948 O00370 1275 aa14.16□□□□□ -0.14
SMC6-201ENST00000351948 ZSCAN5DPP0CG00 497 aa14.16□□□□□ -0.14
SMC6-201ENST00000351948 SATB1Q01826 763 aa14.16□□□□□ -0.14
SMC6-201ENST00000351948 CNGA2Q16280 664 aa14.16□□□□□ -0.14
SMC6-201ENST00000351948 SDE2Q6IQ49 451 aa14.16□□□□□ -0.14
SMC6-201ENST00000351948 CES3Q6UWW8 571 aa14.16□□□□□ -0.14
SMC6-201ENST00000351948 SPDL1Q96EA4 605 aa14.16□□□□□ -0.14
SMC6-201ENST00000351948 LRRC37BQ96QE4 947 aa14.16□□□□□ -0.14
SMC6-201ENST00000351948 B3GNT5Q9BYG0 378 aa14.16□□□□□ -0.14
SMC6-201ENST00000351948 ZCWPW1Q9H0M4 648 aa14.16□□□□□ -0.14
SMC6-201ENST00000351948 NPHS2Q9NP85 383 aa14.16□□□□□ -0.14
SMC6-201ENST00000351948 C2CD2Q9Y426 696 aa14.16□□□□□ -0.14
SMC6-201ENST00000351948 AHDC1Q5TGY3 1603 aaPredicted RBP14.16□□□□□ -0.14
SMC6-201ENST00000351948 RAMP2O60895 175 aa14.16□□□□□ -0.14
SMC6-201ENST00000351948 SNRPAP09012 282 aaKnown RBP14.16□□□□□ -0.14
SMC6-201ENST00000351948 MCL1Q07820 350 aa14.16□□□□□ -0.14
SMC6-201ENST00000351948 ITIH5Q86UX2 942 aa14.16□□□□□ -0.14
SMC6-201ENST00000351948 TMEM86AQ8N2M4 240 aa14.16□□□□□ -0.14
SMC6-201ENST00000351948 LENG9Q96B70 501 aa14.16□□□□□ -0.14
SMC6-201ENST00000351948 KREMEN1Q96MU8 473 aa14.16□□□□□ -0.14
SMC6-201ENST00000351948 ZBTB18Q99592 522 aa14.16□□□□□ -0.14
SMC6-201ENST00000351948 SF3B1O75533 1304 aaKnown RBP eCLIP14.16□□□□□ -0.14
SMC6-201ENST00000351948 GYG2O15488 501 aa14.16□□□□□ -0.14
SMC6-201ENST00000351948 RHOBTB1O94844 696 aa14.16□□□□□ -0.14
SMC6-201ENST00000351948 ICAM3P32942 547 aa14.16□□□□□ -0.14
SMC6-201ENST00000351948 MYO9BQ13459 2157 aa14.16□□□□□ -0.14
SMC6-201ENST00000351948 GTF2H3Q13889 308 aa14.16□□□□□ -0.14
SMC6-201ENST00000351948 NPNTQ6UXI9 565 aa14.16□□□□□ -0.14
SMC6-201ENST00000351948 XAB2Q9HCS7 855 aaKnown RBP14.16□□□□□ -0.14
SMC6-201ENST00000351948 ATP13A1Q9HD20 1204 aa14.16□□□□□ -0.14
SMC6-201ENST00000351948 SCUBE2Q9NQ36 999 aa14.16□□□□□ -0.14
SMC6-201ENST00000351948 ARHGAP28Q9P2N2 729 aa14.16□□□□□ -0.14
SMC6-201ENST00000351948 HIST1H2AGP0C0S8 130 aaPredicted RBP14.15□□□□□ -0.14
SMC6-201ENST00000351948 HIST1H2ADP20671 130 aa14.15□□□□□ -0.14
SMC6-201ENST00000351948 SOX11P35716 441 aa14.15□□□□□ -0.14
SMC6-201ENST00000351948 GLRBP48167 497 aa14.15□□□□□ -0.14
SMC6-201ENST00000351948 PRUNE1Q86TP1 453 aa14.15□□□□□ -0.14
SMC6-201ENST00000351948 NDRG1Q92597 394 aaKnown RBP14.15□□□□□ -0.14
SMC6-201ENST00000351948 NCLNQ969V3 563 aa14.15□□□□□ -0.14
SMC6-201ENST00000351948 HIST1H2AHQ96KK5 128 aa14.15□□□□□ -0.14
SMC6-201ENST00000351948 MFSD14AQ96MC6 490 aa14.15□□□□□ -0.14
SMC6-201ENST00000351948 HIST1H2AJQ99878 128 aa14.15□□□□□ -0.14
SMC6-201ENST00000351948 H2AFJQ9BTM1 129 aa14.15□□□□□ -0.14
SMC6-201ENST00000351948 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms