RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 SCUBE1Q8IWY4 988 aa16.52■□□□□ 0.24
PTPN11-201ENST00000351677 CELF6Q96J87 481 aaKnown RBP16.52■□□□□ 0.24
PTPN11-201ENST00000351677 CHST7Q9NS84 486 aa16.52■□□□□ 0.24
PTPN11-201ENST00000351677 TMEM161AQ9NX61 479 aa16.52■□□□□ 0.24
PTPN11-201ENST00000351677 ATP6V1B1P15313 513 aa16.52■□□□□ 0.23
PTPN11-201ENST00000351677 C10orf88Q9H8K7 445 aa16.52■□□□□ 0.23
PTPN11-201ENST00000351677 KCNMB3Q9NPA1 279 aa16.52■□□□□ 0.23
PTPN11-201ENST00000351677 FAM198AQ9UFP1 575 aa16.52■□□□□ 0.23
PTPN11-201ENST00000351677 F5H5T6 163 aa16.52■□□□□ 0.23
PTPN11-201ENST00000351677 GRIK4Q16099 956 aa16.52■□□□□ 0.23
PTPN11-201ENST00000351677 SCUBE3Q8IX30 993 aa16.52■□□□□ 0.23
PTPN11-201ENST00000351677 CCT7Q99832 543 aa16.52■□□□□ 0.23
PTPN11-201ENST00000351677 MRGBPQ9NV56 204 aa16.52■□□□□ 0.23
PTPN11-201ENST00000351677 FAM32AQ9Y421 112 aaKnown RBP16.52■□□□□ 0.23
PTPN11-201ENST00000351677 C2orf81A6NN90 581 aa16.51■□□□□ 0.23
PTPN11-201ENST00000351677 RGL2O15211 777 aa16.51■□□□□ 0.23
PTPN11-201ENST00000351677 CCDC85BQ15834 202 aaPredicted RBP16.51■□□□□ 0.23
PTPN11-201ENST00000351677 NBPF20Q3BBV1 942 aa16.51■□□□□ 0.23
PTPN11-201ENST00000351677 RNF180Q86T96 592 aa16.51■□□□□ 0.23
PTPN11-201ENST00000351677 MAP4K3Q8IVH8 894 aa16.51■□□□□ 0.23
PTPN11-201ENST00000351677 WWOXQ9NZC7 414 aa16.51■□□□□ 0.23
PTPN11-201ENST00000351677 LACTBL1A8MY62 500 aa16.51■□□□□ 0.23
PTPN11-201ENST00000351677 TM9SF1O15321 606 aa16.51■□□□□ 0.23
PTPN11-201ENST00000351677 STX5Q13190 355 aa16.51■□□□□ 0.23
PTPN11-201ENST00000351677 INPP5DQ92835 1189 aa16.51■□□□□ 0.23
PTPN11-201ENST00000351677 BRD8Q9H0E9 1235 aa16.51■□□□□ 0.23
PTPN11-201ENST00000351677 DDX43Q9NXZ2 648 aaKnown RBP16.51■□□□□ 0.23
PTPN11-201ENST00000351677 CPA4Q9UI42 421 aa16.51■□□□□ 0.23
PTPN11-201ENST00000351677 SHOC2Q9UQ13 582 aa16.51■□□□□ 0.23
PTPN11-201ENST00000351677 PCDHAC2Q9Y5I4 1007 aa16.51■□□□□ 0.23
PTPN11-201ENST00000351677 HEATR9A2RTY3 570 aa16.51■□□□□ 0.23
PTPN11-201ENST00000351677 RCCD1A6NED2 376 aa16.51■□□□□ 0.23
PTPN11-201ENST00000351677 KRT16P08779 473 aa16.51■□□□□ 0.23
PTPN11-201ENST00000351677 CPA3P15088 417 aa16.51■□□□□ 0.23
PTPN11-201ENST00000351677 DSG1Q02413 1049 aa16.51■□□□□ 0.23
PTPN11-201ENST00000351677 WDR59Q6PJI9 974 aa16.51■□□□□ 0.23
PTPN11-201ENST00000351677 UBE2OQ9C0C9 1292 aaKnown RBP16.51■□□□□ 0.23
PTPN11-201ENST00000351677 CYP3A4P08684 503 aa16.51■□□□□ 0.23
PTPN11-201ENST00000351677 ALDH7A1P49419 539 aaKnown RBP16.51■□□□□ 0.23
PTPN11-201ENST00000351677 ADIGQ0VDE8 80 aa16.51■□□□□ 0.23
PTPN11-201ENST00000351677 MPP3Q13368 585 aa16.51■□□□□ 0.23
PTPN11-201ENST00000351677 SEL1L3Q68CR1 1132 aa16.51■□□□□ 0.23
PTPN11-201ENST00000351677 TIGD7Q6NT04 549 aaPredicted RBP16.51■□□□□ 0.23
PTPN11-201ENST00000351677 NAT9Q9BTE0 207 aa16.51■□□□□ 0.23
PTPN11-201ENST00000351677 WNT7AO00755 349 aa16.51■□□□□ 0.23
PTPN11-201ENST00000351677 THRAP10827 490 aa16.51■□□□□ 0.23
PTPN11-201ENST00000351677 TPH1P17752 444 aa16.51■□□□□ 0.23
PTPN11-201ENST00000351677 AASDHQ4L235 1098 aaPredicted RBP16.51■□□□□ 0.23
PTPN11-201ENST00000351677 PPP4R4Q6NUP7 873 aa16.51■□□□□ 0.23
PTPN11-201ENST00000351677 DNAJB3Q8WWF6 145 aa16.51■□□□□ 0.23
PTPN11-201ENST00000351677 ZNF446Q9NWS9 450 aa16.51■□□□□ 0.23
PTPN11-201ENST00000351677 VANGL2Q9ULK5 521 aa16.51■□□□□ 0.23
PTPN11-201ENST00000351677 DTNAQ9Y4J8 743 aa16.51■□□□□ 0.23
PTPN11-201ENST00000351677 TGFB3P10600 412 aa16.5■□□□□ 0.23
PTPN11-201ENST00000351677 GALNTL6Q49A17 601 aa16.5■□□□□ 0.23
PTPN11-201ENST00000351677 FOXR1Q6PIV2 292 aa16.5■□□□□ 0.23
PTPN11-201ENST00000351677 REPS2Q8NFH8 660 aa16.5■□□□□ 0.23
PTPN11-201ENST00000351677 RXFP1Q9HBX9 757 aa16.5■□□□□ 0.23
PTPN11-201ENST00000351677 NT5MQ9NPB1 228 aa16.5■□□□□ 0.23
PTPN11-201ENST00000351677 ZNF711Q9Y462 761 aa16.5■□□□□ 0.23
PTPN11-201ENST00000351677 MRPL42Q9Y6G3 142 aaKnown RBP16.5■□□□□ 0.23
PTPN11-201ENST00000351677 LRRC55Q6ZSA7 311 aa16.5■□□□□ 0.23
PTPN11-201ENST00000351677 TCP10LQ8TDR4 215 aa16.5■□□□□ 0.23
PTPN11-201ENST00000351677 COLEC11Q9BWP8 271 aa16.5■□□□□ 0.23
PTPN11-201ENST00000351677 CAAP1Q9H8G2 361 aa16.5■□□□□ 0.23
PTPN11-201ENST00000351677 MEIS2O14770 477 aa16.5■□□□□ 0.23
PTPN11-201ENST00000351677 FBXO21O94952 628 aa16.5■□□□□ 0.23
PTPN11-201ENST00000351677 CALB2P22676 271 aa16.5■□□□□ 0.23
PTPN11-201ENST00000351677 FCGRTP55899 365 aa16.5■□□□□ 0.23
PTPN11-201ENST00000351677 MRPS35P82673 323 aaKnown RBP16.5■□□□□ 0.23
PTPN11-201ENST00000351677 CSHL1Q14406 222 aa16.5■□□□□ 0.23
PTPN11-201ENST00000351677 C9orf131Q5VYM1 1079 aa16.5■□□□□ 0.23
PTPN11-201ENST00000351677 NR1H4Q96RI1 486 aaPredicted RBP16.5■□□□□ 0.23
PTPN11-201ENST00000351677 ECSITQ9BQ95 431 aa16.5■□□□□ 0.23
PTPN11-201ENST00000351677 ASCC2Q9H1I8 757 aaPredicted RBP16.5■□□□□ 0.23
PTPN11-201ENST00000351677 PCDHGC5Q9Y5F6 944 aa16.5■□□□□ 0.23
PTPN11-201ENST00000351677 WDR27A2RRH5 827 aa16.5■□□□□ 0.23
PTPN11-201ENST00000351677 C16orf96A6NNT2 1141 aa16.5■□□□□ 0.23
PTPN11-201ENST00000351677 H2AFYO75367 372 aaKnown RBP16.5■□□□□ 0.23
PTPN11-201ENST00000351677 TRIM16O95361 564 aa16.5■□□□□ 0.23
PTPN11-201ENST00000351677 AMPD1P23109 780 aa16.5■□□□□ 0.23
PTPN11-201ENST00000351677 LHX1P48742 406 aa16.5■□□□□ 0.23
PTPN11-201ENST00000351677 ZNF268Q14587 947 aaPredicted RBP16.5■□□□□ 0.23
PTPN11-201ENST00000351677 PKN2Q16513 984 aaKnown RBP16.5■□□□□ 0.23
PTPN11-201ENST00000351677 EFL1Q7Z2Z2 1120 aaKnown RBP16.5■□□□□ 0.23
PTPN11-201ENST00000351677 DNAJC19Q96DA6 116 aa16.5■□□□□ 0.23
PTPN11-201ENST00000351677 ASTN1O14525 1302 aa16.5■□□□□ 0.23
PTPN11-201ENST00000351677 CFAP99D6REC4 459 aa16.49■□□□□ 0.23
PTPN11-201ENST00000351677 ZSCAN5DPP0CG00 497 aa16.49■□□□□ 0.23
PTPN11-201ENST00000351677 CDH2P19022 906 aaPredicted RBP16.49■□□□□ 0.23
PTPN11-201ENST00000351677 RANBP1P43487 201 aa16.49■□□□□ 0.23
PTPN11-201ENST00000351677 BRSK2Q8IWQ3 736 aa16.49■□□□□ 0.23
PTPN11-201ENST00000351677 TDRD5Q8NAT2 981 aaKnown RBP16.49■□□□□ 0.23
PTPN11-201ENST00000351677 P2RX7Q99572 595 aaKnown RBP16.49■□□□□ 0.23
PTPN11-201ENST00000351677 CNTNAP2Q9UHC6 1331 aa16.49■□□□□ 0.23
PTPN11-201ENST00000351677 F8VP50 259 aa16.49■□□□□ 0.23
PTPN11-201ENST00000351677 ASS1P00966 412 aaKnown RBP16.49■□□□□ 0.23
PTPN11-201ENST00000351677 VCPIP1Q96JH7 1222 aa16.49■□□□□ 0.23
PTPN11-201ENST00000351677 THUMPD3Q9BV44 507 aaKnown RBP16.49■□□□□ 0.23
PTPN11-201ENST00000351677 CNTFP26441 200 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms