RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 KREMEN1Q96MU8 473 aa12.61□□□□□ -0.39
SMAD9-201ENST00000350148 RGS17Q9UGC6 210 aaPredicted RBP12.61□□□□□ -0.39
SMAD9-201ENST00000350148 IGF2BP3O00425 579 aaKnown RBP eCLIP12.6□□□□□ -0.39
SMAD9-201ENST00000350148 FGFR1OP2Q9NVK5 253 aa12.6□□□□□ -0.39
SMAD9-201ENST00000350148 EFR3BQ9Y2G0 817 aa12.6□□□□□ -0.39
SMAD9-201ENST00000350148 FAM71DQ8N9W8 422 aa12.6□□□□□ -0.39
SMAD9-201ENST00000350148 GAD1Q99259 594 aa12.6□□□□□ -0.39
SMAD9-201ENST00000350148 FAM105AQ9NUU6 356 aa12.6□□□□□ -0.39
SMAD9-201ENST00000350148 PCYOX1Q9UHG3 505 aa12.6□□□□□ -0.39
SMAD9-201ENST00000350148 G3BP2Q9UN86 482 aaKnown RBP12.6□□□□□ -0.39
SMAD9-201ENST00000350148 REXO2Q9Y3B8 237 aaKnown RBP12.6□□□□□ -0.39
SMAD9-201ENST00000350148 ANGPTL3Q9Y5C1 460 aa12.6□□□□□ -0.39
SMAD9-201ENST00000350148 APOC4-APOC2K7ER74 178 aa12.6□□□□□ -0.39
SMAD9-201ENST00000350148 B4GALT5O43286 388 aa12.6□□□□□ -0.39
SMAD9-201ENST00000350148 UPP2O95045 317 aa12.6□□□□□ -0.39
SMAD9-201ENST00000350148 TTC4O95801 387 aa12.6□□□□□ -0.39
SMAD9-201ENST00000350148 APOC2P02655 101 aa12.6□□□□□ -0.39
SMAD9-201ENST00000350148 CNTFP26441 200 aa12.6□□□□□ -0.39
SMAD9-201ENST00000350148 CCR1P32246 355 aa12.6□□□□□ -0.39
SMAD9-201ENST00000350148 PSEN1P49768 467 aa12.6□□□□□ -0.39
SMAD9-201ENST00000350148 ORC1Q13415 861 aa12.6□□□□□ -0.39
SMAD9-201ENST00000350148 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.6□□□□□ -0.39
SMAD9-201ENST00000350148 DENND1BQ6P3S1 775 aa12.6□□□□□ -0.39
SMAD9-201ENST00000350148 SLC2A14Q8TDB8 520 aa12.6□□□□□ -0.39
SMAD9-201ENST00000350148 VAT1Q99536 393 aa12.6□□□□□ -0.39
SMAD9-201ENST00000350148 STK39Q9UEW8 545 aa12.6□□□□□ -0.39
SMAD9-201ENST00000350148 SH3BP1Q9Y3L3 701 aa12.6□□□□□ -0.39
SMAD9-201ENST00000350148 PCDHB12Q9Y5F1 795 aa12.6□□□□□ -0.39
SMAD9-201ENST00000350148 CHEK2O96017 543 aa12.6□□□□□ -0.39
SMAD9-201ENST00000350148 LRG1P02750 347 aa12.6□□□□□ -0.39
SMAD9-201ENST00000350148 HSPA8P11142 646 aaKnown RBP12.6□□□□□ -0.39
SMAD9-201ENST00000350148 NPR3P17342 541 aa12.6□□□□□ -0.39
SMAD9-201ENST00000350148 YY1P25490 414 aa12.6□□□□□ -0.39
SMAD9-201ENST00000350148 HNRNPH1P31943 449 aaKnown RBP12.6□□□□□ -0.39
SMAD9-201ENST00000350148 SPRP35270 261 aaPredicted RBP12.6□□□□□ -0.39
SMAD9-201ENST00000350148 CDH8P55286 799 aa12.6□□□□□ -0.39
SMAD9-201ENST00000350148 CORO7P57737 925 aa12.6□□□□□ -0.39
SMAD9-201ENST00000350148 CAPRIN2Q6IMN6 1127 aaKnown RBP12.6□□□□□ -0.39
SMAD9-201ENST00000350148 FNIP1Q8TF40 1166 aa12.6□□□□□ -0.39
SMAD9-201ENST00000350148 EMID1Q96A84 441 aaPredicted RBP12.6□□□□□ -0.39
SMAD9-201ENST00000350148 MRGBPQ9NV56 204 aa12.6□□□□□ -0.39
SMAD9-201ENST00000350148 UTP6Q9NYH9 597 aaKnown RBP12.6□□□□□ -0.39
SMAD9-201ENST00000350148 WRAP73Q9P2S5 460 aaPredicted RBP12.6□□□□□ -0.39
SMAD9-201ENST00000350148 UXTQ9UBK9 157 aaPredicted RBP12.6□□□□□ -0.39
SMAD9-201ENST00000350148 SLC24A2Q9UI40 661 aa12.6□□□□□ -0.39
SMAD9-201ENST00000350148 RAD54BQ9Y620 910 aa12.6□□□□□ -0.39
SMAD9-201ENST00000350148 SNRPAP09012 282 aaKnown RBP12.59□□□□□ -0.39
SMAD9-201ENST00000350148 PTP4A2Q12974 167 aa12.59□□□□□ -0.39
SMAD9-201ENST00000350148 TTC39BQ5VTQ0 682 aaPredicted RBP12.59□□□□□ -0.39
SMAD9-201ENST00000350148 C9orf57Q5W0N0 161 aa12.59□□□□□ -0.39
SMAD9-201ENST00000350148 SEMA4DQ92854 862 aa12.59□□□□□ -0.39
SMAD9-201ENST00000350148 CHORDC1Q9UHD1 332 aaPredicted RBP12.59□□□□□ -0.39
SMAD9-201ENST00000350148 TRHDEQ9UKU6 1024 aa12.59□□□□□ -0.39
SMAD9-201ENST00000350148 ZNF711Q9Y462 761 aa12.59□□□□□ -0.39
SMAD9-201ENST00000350148 PYGMP11217 842 aa12.59□□□□□ -0.39
SMAD9-201ENST00000350148 GEMIN4P57678 1058 aaKnown RBP12.59□□□□□ -0.39
SMAD9-201ENST00000350148 TMPRSS15P98073 1019 aa12.59□□□□□ -0.39
SMAD9-201ENST00000350148 AMPD2Q01433 879 aa12.59□□□□□ -0.39
SMAD9-201ENST00000350148 NXNQ6DKJ4 435 aa12.59□□□□□ -0.39
SMAD9-201ENST00000350148 NLRP14Q86W24 1093 aa12.59□□□□□ -0.39
SMAD9-201ENST00000350148 MTBPQ96DY7 904 aa12.59□□□□□ -0.39
SMAD9-201ENST00000350148 USP20Q9Y2K6 914 aa12.59□□□□□ -0.39
SMAD9-201ENST00000350148 F5H5T6 163 aa12.59□□□□□ -0.39
SMAD9-201ENST00000350148 PGK1P00558 417 aa12.59□□□□□ -0.39
SMAD9-201ENST00000350148 TSHRP16473 764 aa12.59□□□□□ -0.39
SMAD9-201ENST00000350148 CYP2F1P24903 491 aa12.59□□□□□ -0.39
SMAD9-201ENST00000350148 EPHB3P54753 998 aa12.59□□□□□ -0.39
SMAD9-201ENST00000350148 OXCT1P55809 520 aa12.59□□□□□ -0.39
SMAD9-201ENST00000350148 PTK7Q13308 1070 aa12.59□□□□□ -0.39
SMAD9-201ENST00000350148 IKBKEQ14164 716 aa12.59□□□□□ -0.39
SMAD9-201ENST00000350148 NOMO2Q5JPE7 1267 aa12.59□□□□□ -0.39
SMAD9-201ENST00000350148 LCLAT1Q6UWP7 414 aa12.59□□□□□ -0.39
SMAD9-201ENST00000350148 GDAP1Q8TB36 358 aa12.59□□□□□ -0.39
SMAD9-201ENST00000350148 VPS9D1Q9Y2B5 631 aa12.59□□□□□ -0.39
SMAD9-201ENST00000350148 IPPQ9Y573 584 aa12.59□□□□□ -0.39
SMAD9-201ENST00000350148 STYXL1Q9Y6J8 313 aa12.59□□□□□ -0.39
SMAD9-201ENST00000350148 POMCP01189 267 aa12.59□□□□□ -0.39
SMAD9-201ENST00000350148 HERC6Q8IVU3 1022 aa12.59□□□□□ -0.39
SMAD9-201ENST00000350148 STAMBPL1Q96FJ0 436 aa12.59□□□□□ -0.39
SMAD9-201ENST00000350148 ABCC13Q9NSE7 274 aa12.59□□□□□ -0.39
SMAD9-201ENST00000350148 DOCK2Q92608 1830 aa12.59□□□□□ -0.39
SMAD9-201ENST00000350148 DNALI1O14645 258 aaPredicted RBP12.59□□□□□ -0.39
SMAD9-201ENST00000350148 XPO1O14980 1071 aaKnown RBP12.59□□□□□ -0.39
SMAD9-201ENST00000350148 ADIGQ0VDE8 80 aa12.59□□□□□ -0.39
SMAD9-201ENST00000350148 HDAC11Q96DB2 347 aa12.59□□□□□ -0.39
SMAD9-201ENST00000350148 LRRC19Q9H756 370 aa12.59□□□□□ -0.39
SMAD9-201ENST00000350148 LAMB1P07942 1786 aa12.58□□□□□ -0.39
SMAD9-201ENST00000350148 MAGEB16A2A368 324 aa12.58□□□□□ -0.4
SMAD9-201ENST00000350148 TYK2P29597 1187 aa12.58□□□□□ -0.4
SMAD9-201ENST00000350148 ITGA7Q13683 1181 aa12.58□□□□□ -0.4
SMAD9-201ENST00000350148 FSCBQ5H9T9 825 aa12.58□□□□□ -0.4
SMAD9-201ENST00000350148 GJC2Q5T442 439 aaPredicted RBP12.58□□□□□ -0.4
SMAD9-201ENST00000350148 PLEKHA7Q6IQ23 1121 aa12.58□□□□□ -0.4
SMAD9-201ENST00000350148 RASGEF1CQ8N431 466 aa12.58□□□□□ -0.4
SMAD9-201ENST00000350148 B3GALNT2Q8NCR0 500 aa12.58□□□□□ -0.4
SMAD9-201ENST00000350148 FAM47DPA6NHR8 397 aa12.58□□□□□ -0.4
SMAD9-201ENST00000350148 TBKBP1A7MCY6 615 aa12.58□□□□□ -0.4
SMAD9-201ENST00000350148 CILPO75339 1184 aa12.58□□□□□ -0.4
SMAD9-201ENST00000350148 HSPA4LO95757 839 aa12.58□□□□□ -0.4
SMAD9-201ENST00000350148 PHEXP78562 749 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms