RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 ABCC13Q9NSE7 274 aa21.83■■□□□ 1.08
SMARCB1-202ENST00000344921 DNMT3LQ9UJW3 386 aa21.83■■□□□ 1.08
SMARCB1-202ENST00000344921 CAPN11Q9UMQ6 739 aa21.83■■□□□ 1.08
SMARCB1-202ENST00000344921 ZNF263O14978 683 aa21.82■■□□□ 1.08
SMARCB1-202ENST00000344921 SART1O43290 800 aaKnown RBP21.82■■□□□ 1.08
SMARCB1-202ENST00000344921 CHRNB2P17787 502 aa21.82■■□□□ 1.08
SMARCB1-202ENST00000344921 NAA35Q5VZE5 725 aa21.82■■□□□ 1.08
SMARCB1-202ENST00000344921 ERICH1Q86X53 443 aa21.82■■□□□ 1.08
SMARCB1-202ENST00000344921 MSANTD4Q8NCY6 345 aa21.82■■□□□ 1.08
SMARCB1-202ENST00000344921 EDEM1Q92611 657 aa21.82■■□□□ 1.08
SMARCB1-202ENST00000344921 AGPAT1Q99943 283 aa21.82■■□□□ 1.08
SMARCB1-202ENST00000344921 AIPL1Q9NZN9 384 aa21.82■■□□□ 1.08
SMARCB1-202ENST00000344921 TJP2Q9UDY2 1190 aa21.82■■□□□ 1.08
SMARCB1-202ENST00000344921 FBXL21Q9UKT6 434 aa21.82■■□□□ 1.08
SMARCB1-202ENST00000344921 BDP1A6H8Y1 2624 aa21.81■■□□□ 1.08
SMARCB1-202ENST00000344921 LEFTY2O00292 366 aa21.81■■□□□ 1.08
SMARCB1-202ENST00000344921 MDM4O15151 490 aa21.81■■□□□ 1.08
SMARCB1-202ENST00000344921 PAPSS1O43252 624 aaPredicted RBP21.81■■□□□ 1.08
SMARCB1-202ENST00000344921 LTFP02788 710 aa21.81■■□□□ 1.08
SMARCB1-202ENST00000344921 GYPCP04921 128 aa21.81■■□□□ 1.08
SMARCB1-202ENST00000344921 TPM1P09493 284 aa21.81■■□□□ 1.08
SMARCB1-202ENST00000344921 CASP14P31944 242 aa21.81■■□□□ 1.08
SMARCB1-202ENST00000344921 CDH5P33151 784 aaPredicted RBP21.81■■□□□ 1.08
SMARCB1-202ENST00000344921 ZBED6P86452 979 aa21.81■■□□□ 1.08
SMARCB1-202ENST00000344921 EFEMP1Q12805 493 aa21.81■■□□□ 1.08
SMARCB1-202ENST00000344921 OR6B2Q6IFH4 312 aa21.81■■□□□ 1.08
SMARCB1-202ENST00000344921 TRIM72Q6ZMU5 477 aa21.81■■□□□ 1.08
SMARCB1-202ENST00000344921 HFE2Q6ZVN8 426 aa21.81■■□□□ 1.08
SMARCB1-202ENST00000344921 BHLHA9Q7RTU4 235 aa21.81■■□□□ 1.08
SMARCB1-202ENST00000344921 MIB1Q86YT6 1006 aa21.81■■□□□ 1.08
SMARCB1-202ENST00000344921 VSTM4Q8IW00 320 aa21.81■■□□□ 1.08
SMARCB1-202ENST00000344921 EDAQ92838 391 aa21.81■■□□□ 1.08
SMARCB1-202ENST00000344921 IRF7Q92985 503 aa21.81■■□□□ 1.08
SMARCB1-202ENST00000344921 RASAL2Q9UJF2 1139 aa21.81■■□□□ 1.08
SMARCB1-202ENST00000344921 PI4K2BG5E9Z4 385 aa21.8■■□□□ 1.08
SMARCB1-202ENST00000344921 AP5Z1O43299 807 aa21.8■■□□□ 1.08
SMARCB1-202ENST00000344921 NOMO3P69849 1222 aa21.8■■□□□ 1.08
SMARCB1-202ENST00000344921 GOLGA8FQ08AF8 430 aa21.8■■□□□ 1.08
SMARCB1-202ENST00000344921 GOLGA8DPQ0D2H9 430 aa21.8■■□□□ 1.08
SMARCB1-202ENST00000344921 KLHL30Q0D2K2 578 aa21.8■■□□□ 1.08
SMARCB1-202ENST00000344921 FCHO2Q0JRZ9 810 aa21.8■■□□□ 1.08
SMARCB1-202ENST00000344921 TRIM14Q14142 442 aa21.8■■□□□ 1.08
SMARCB1-202ENST00000344921 MTF1Q14872 753 aa21.8■■□□□ 1.08
SMARCB1-202ENST00000344921 PTPN20Q4JDL3 420 aa21.8■■□□□ 1.08
SMARCB1-202ENST00000344921 ARHGAP29Q52LW3 1261 aa21.8■■□□□ 1.08
SMARCB1-202ENST00000344921 DDX42Q86XP3 938 aaKnown RBP eCLIP21.8■■□□□ 1.08
SMARCB1-202ENST00000344921 ZFYVE19Q96K21 471 aa21.8■■□□□ 1.08
SMARCB1-202ENST00000344921 HAUS4Q9H6D7 363 aa21.8■■□□□ 1.08
SMARCB1-202ENST00000344921 GKN1Q9NS71 199 aa21.8■■□□□ 1.08
SMARCB1-202ENST00000344921 OLA1Q9NTK5 396 aaKnown RBP21.8■■□□□ 1.08
SMARCB1-202ENST00000344921 HELZP42694 1942 aaKnown RBP21.8■■□□□ 1.08
SMARCB1-202ENST00000344921 CAPN9O14815 690 aa21.8■■□□□ 1.08
SMARCB1-202ENST00000344921 ERBB2P04626 1255 aa21.8■■□□□ 1.08
SMARCB1-202ENST00000344921 IRF1P10914 325 aa21.8■■□□□ 1.08
SMARCB1-202ENST00000344921 TNFAIP3P21580 790 aa21.8■■□□□ 1.08
SMARCB1-202ENST00000344921 ZXDBP98169 803 aa21.8■■□□□ 1.08
SMARCB1-202ENST00000344921 PFKPQ01813 784 aa21.8■■□□□ 1.08
SMARCB1-202ENST00000344921 ZNF77Q15935 545 aa21.8■■□□□ 1.08
SMARCB1-202ENST00000344921 KLHDC10Q6PID8 442 aa21.8■■□□□ 1.08
SMARCB1-202ENST00000344921 ZNF276Q8N554 614 aa21.8■■□□□ 1.08
SMARCB1-202ENST00000344921 C18orf8Q96DM3 657 aa21.8■■□□□ 1.08
SMARCB1-202ENST00000344921 CFAP97Q9P2B7 532 aa21.8■■□□□ 1.08
SMARCB1-202ENST00000344921 STRIP2Q9ULQ0 834 aa21.8■■□□□ 1.08
SMARCB1-202ENST00000344921 SH3BP1Q9Y3L3 701 aa21.8■■□□□ 1.08
SMARCB1-202ENST00000344921 CHADO15335 359 aa21.79■■□□□ 1.08
SMARCB1-202ENST00000344921 SKILP12757 684 aa21.79■■□□□ 1.08
SMARCB1-202ENST00000344921 NCAM1P13591 858 aa21.79■■□□□ 1.08
SMARCB1-202ENST00000344921 USP4Q13107 963 aa21.79■■□□□ 1.08
SMARCB1-202ENST00000344921 TDRD12Q587J7 1177 aaKnown RBP21.79■■□□□ 1.08
SMARCB1-202ENST00000344921 RIN3Q8TB24 985 aa21.79■■□□□ 1.08
SMARCB1-202ENST00000344921 PCDHB18PQ96TA0 734 aa21.79■■□□□ 1.08
SMARCB1-202ENST00000344921 SLC2A4RGQ9NR83 387 aa21.79■■□□□ 1.08
SMARCB1-202ENST00000344921 MARCH2Q9P0N8 246 aa21.79■■□□□ 1.08
SMARCB1-202ENST00000344921 CYP1A1P04798 512 aaPredicted RBP21.78■■□□□ 1.08
SMARCB1-202ENST00000344921 NSFP46459 744 aaKnown RBP21.78■■□□□ 1.08
SMARCB1-202ENST00000344921 SIGLEC14Q08ET2 396 aa21.78■■□□□ 1.08
SMARCB1-202ENST00000344921 E4F1Q66K89 784 aaPredicted RBP21.78■■□□□ 1.08
SMARCB1-202ENST00000344921 TOGARAM2Q6ZUX3 1019 aa21.78■■□□□ 1.08
SMARCB1-202ENST00000344921 FAM183BPQ6ZVS7 135 aa21.78■■□□□ 1.08
SMARCB1-202ENST00000344921 SLC30A5Q8TAD4 765 aa21.78■■□□□ 1.08
SMARCB1-202ENST00000344921 CSGALNACT1Q8TDX6 532 aa21.78■■□□□ 1.08
SMARCB1-202ENST00000344921 TRIM62Q9BVG3 475 aa21.78■■□□□ 1.08
SMARCB1-202ENST00000344921 EPHX3Q9H6B9 360 aa21.78■■□□□ 1.08
SMARCB1-202ENST00000344921 TRIOO75962 3097 aa21.78■■□□□ 1.08
SMARCB1-202ENST00000344921 SCAMP3O14828 347 aaKnown RBP21.77■■□□□ 1.08
SMARCB1-202ENST00000344921 TCF3P15923 654 aa21.77■■□□□ 1.08
SMARCB1-202ENST00000344921 YWHAZP63104 245 aaKnown RBP21.77■■□□□ 1.08
SMARCB1-202ENST00000344921 C2CD6Q53TS8 623 aa21.77■■□□□ 1.08
SMARCB1-202ENST00000344921 EFHC1Q5JVL4 640 aa21.77■■□□□ 1.08
SMARCB1-202ENST00000344921 TMC6Q7Z403 805 aa21.77■■□□□ 1.08
SMARCB1-202ENST00000344921 ZDHHC17Q8IUH5 632 aa21.77■■□□□ 1.08
SMARCB1-202ENST00000344921 SYN2Q92777 582 aaPredicted RBP21.77■■□□□ 1.08
SMARCB1-202ENST00000344921 ZFRQ96KR1 1074 aaKnown RBP21.77■■□□□ 1.08
SMARCB1-202ENST00000344921 KLF16Q9BXK1 252 aaPredicted RBP21.77■■□□□ 1.08
SMARCB1-202ENST00000344921 POPDC2Q9HBU9 364 aa21.77■■□□□ 1.08
SMARCB1-202ENST00000344921 DUS2Q9NX74 493 aaKnown RBP21.77■■□□□ 1.08
SMARCB1-202ENST00000344921 CA14Q9ULX7 337 aa21.77■■□□□ 1.08
SMARCB1-202ENST00000344921 GRAP2O75791 330 aa21.77■■□□□ 1.08
SMARCB1-202ENST00000344921 HMBSP08397 361 aa21.77■■□□□ 1.08
SMARCB1-202ENST00000344921 PRKCIP41743 596 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms