RNA–Protein interactions for RNA: ENST00000343638.9

UBTF-202, Transcript of upstream binding transcription factor, humanhuman

TSL 1 (best) BASIC

Gene UBTF, Length 4,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBTF-202ENST00000343638 C9orf57Q5W0N0 161 aa19.59■□□□□ 0.73
UBTF-202ENST00000343638 PIDD1Q9HB75 910 aa19.59■□□□□ 0.73
UBTF-202ENST00000343638 APOBEC2Q9Y235 224 aaKnown RBP19.59■□□□□ 0.73
UBTF-202ENST00000343638 ANXA9O76027 345 aa19.58■□□□□ 0.73
UBTF-202ENST00000343638 RGS20O76081 388 aa19.58■□□□□ 0.73
UBTF-202ENST00000343638 KITP10721 976 aa19.58■□□□□ 0.73
UBTF-202ENST00000343638 PECAM1P16284 738 aaPredicted RBP19.58■□□□□ 0.73
UBTF-202ENST00000343638 TNFRSF8P28908 595 aa19.58■□□□□ 0.73
UBTF-202ENST00000343638 NOS2P35228 1153 aa19.58■□□□□ 0.73
UBTF-202ENST00000343638 PPP1R26Q5T8A7 1209 aaPredicted RBP19.58■□□□□ 0.73
UBTF-202ENST00000343638 MAP3K21Q5TCX8 1036 aa19.58■□□□□ 0.73
UBTF-202ENST00000343638 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.58■□□□□ 0.73
UBTF-202ENST00000343638 GPATCH11Q8N954 259 aa19.58■□□□□ 0.73
UBTF-202ENST00000343638 TSPAN18Q96SJ8 248 aa19.58■□□□□ 0.73
UBTF-202ENST00000343638 PPP1R12CQ9BZL4 782 aa19.58■□□□□ 0.73
UBTF-202ENST00000343638 RNF208Q9H0X6 261 aa19.58■□□□□ 0.73
UBTF-202ENST00000343638 MTIF3Q9H2K0 278 aaKnown RBP19.58■□□□□ 0.73
UBTF-202ENST00000343638 SAE1Q9UBE0 346 aaPredicted RBP19.58■□□□□ 0.73
UBTF-202ENST00000343638 ATG7O95352 703 aa19.58■□□□□ 0.73
UBTF-202ENST00000343638 ELNP15502 786 aa19.58■□□□□ 0.73
UBTF-202ENST00000343638 SPRP35270 261 aaPredicted RBP19.58■□□□□ 0.73
UBTF-202ENST00000343638 DRG2P55039 364 aaKnown RBP19.58■□□□□ 0.73
UBTF-202ENST00000343638 EFEMP1Q12805 493 aa19.58■□□□□ 0.73
UBTF-202ENST00000343638 FAM96AQ9H5X1 160 aa19.58■□□□□ 0.73
UBTF-202ENST00000343638 TUBGCP4Q9UGJ1 667 aa19.58■□□□□ 0.73
UBTF-202ENST00000343638 SCN7AQ01118 1682 aa19.58■□□□□ 0.73
UBTF-202ENST00000343638 CILPO75339 1184 aa19.58■□□□□ 0.72
UBTF-202ENST00000343638 NNMTP40261 264 aa19.58■□□□□ 0.72
UBTF-202ENST00000343638 SLC10A6Q3KNW5 377 aa19.58■□□□□ 0.72
UBTF-202ENST00000343638 POLNQ7Z5Q5 900 aa19.58■□□□□ 0.72
UBTF-202ENST00000343638 ZC3H3Q8IXZ2 948 aaKnown RBP19.58■□□□□ 0.72
UBTF-202ENST00000343638 NAT9Q9BTE0 207 aa19.58■□□□□ 0.72
UBTF-202ENST00000343638 C20orf96Q9NUD7 363 aaPredicted RBP19.58■□□□□ 0.72
UBTF-202ENST00000343638 RPS6KL1Q9Y6S9 549 aa19.58■□□□□ 0.72
UBTF-202ENST00000343638 TRIM49D1C9J1S8 452 aa19.58■□□□□ 0.72
UBTF-202ENST00000343638 PMPCBO75439 489 aa19.58■□□□□ 0.72
UBTF-202ENST00000343638 FAM107AO95990 144 aa19.58■□□□□ 0.72
UBTF-202ENST00000343638 JCHAINP01591 159 aa19.58■□□□□ 0.72
UBTF-202ENST00000343638 CHRNB2P17787 502 aa19.58■□□□□ 0.72
UBTF-202ENST00000343638 CCR1P32246 355 aa19.58■□□□□ 0.72
UBTF-202ENST00000343638 ZNF516Q92618 1163 aa19.58■□□□□ 0.72
UBTF-202ENST00000343638 CHST12Q9NRB3 414 aa19.58■□□□□ 0.72
UBTF-202ENST00000343638 GIT1Q9Y2X7 761 aa19.58■□□□□ 0.72
UBTF-202ENST00000343638 TBKBP1A7MCY6 615 aa19.57■□□□□ 0.72
UBTF-202ENST00000343638 NCAM2O15394 837 aa19.57■□□□□ 0.72
UBTF-202ENST00000343638 YBX3P16989 372 aaKnown RBP eCLIP19.57■□□□□ 0.723e-6■□□□□ 10.4
UBTF-202ENST00000343638 SNCBQ16143 134 aa19.57■□□□□ 0.72
UBTF-202ENST00000343638 ACCSLQ4AC99 568 aa19.57■□□□□ 0.72
UBTF-202ENST00000343638 RASGEF1CQ8N431 466 aa19.57■□□□□ 0.72
UBTF-202ENST00000343638 PTPRN2Q92932 1015 aa19.57■□□□□ 0.72
UBTF-202ENST00000343638 MRPL45Q9BRJ2 306 aaKnown RBP19.57■□□□□ 0.72
UBTF-202ENST00000343638 FBXO44Q9H4M3 255 aa19.57■□□□□ 0.72
UBTF-202ENST00000343638 SDR42E2A6NKP2 422 aa19.57■□□□□ 0.72
UBTF-202ENST00000343638 DPYSL4O14531 572 aa19.57■□□□□ 0.72
UBTF-202ENST00000343638 USP17L7P0C7H9 530 aa19.57■□□□□ 0.72
UBTF-202ENST00000343638 RPL9P32969 192 aaKnown RBP19.57■□□□□ 0.72
UBTF-202ENST00000343638 AARSP49588 968 aaKnown RBP eCLIP19.57■□□□□ 0.72
UBTF-202ENST00000343638 RAD51Q06609 339 aa19.57■□□□□ 0.72
UBTF-202ENST00000343638 SLC39A4Q6P5W5 647 aa19.57■□□□□ 0.72
UBTF-202ENST00000343638 LINC00523Q86TU6 105 aa19.57■□□□□ 0.72
UBTF-202ENST00000343638 PCMTD2Q9NV79 361 aa19.57■□□□□ 0.72
UBTF-202ENST00000343638 A0A1B0GUA9 196 aa19.57■□□□□ 0.72
UBTF-202ENST00000343638 SLC8A1P32418 973 aa19.57■□□□□ 0.72
UBTF-202ENST00000343638 NR2C2P49116 596 aa19.57■□□□□ 0.72
UBTF-202ENST00000343638 SLC11A2P49281 568 aa19.57■□□□□ 0.72
UBTF-202ENST00000343638 ZNF844Q08AG5 666 aa19.57■□□□□ 0.72
UBTF-202ENST00000343638 TTC39BQ5VTQ0 682 aaPredicted RBP19.57■□□□□ 0.72
UBTF-202ENST00000343638 CCNJLQ8IV13 435 aa19.57■□□□□ 0.72
UBTF-202ENST00000343638 PDCD7Q8N8D1 485 aaKnown RBP19.57■□□□□ 0.72
UBTF-202ENST00000343638 PGLYRP2Q96PD5 576 aa19.57■□□□□ 0.72
UBTF-202ENST00000343638 ARL2BPQ9Y2Y0 163 aa19.57■□□□□ 0.72
UBTF-202ENST00000343638 IRF1P10914 325 aa19.57■□□□□ 0.72
UBTF-202ENST00000343638 KRT4P19013 534 aa19.57■□□□□ 0.72
UBTF-202ENST00000343638 MROH9Q5TGP6 573 aa19.57■□□□□ 0.72
UBTF-202ENST00000343638 LCLAT1Q6UWP7 414 aa19.57■□□□□ 0.72
UBTF-202ENST00000343638 ZFP69BQ9UJL9 534 aa19.57■□□□□ 0.72
UBTF-202ENST00000343638 ATP11BQ9Y2G3 1177 aa19.57■□□□□ 0.72
UBTF-202ENST00000343638 O00370 1275 aa19.56■□□□□ 0.72
UBTF-202ENST00000343638 DDX3YO15523 660 aaKnown RBP19.56■□□□□ 0.72
UBTF-202ENST00000343638 SH3BP5O60239 455 aa19.56■□□□□ 0.72
UBTF-202ENST00000343638 CYBBP04839 570 aa19.56■□□□□ 0.72
UBTF-202ENST00000343638 RNF135Q8IUD6 432 aa19.56■□□□□ 0.72
UBTF-202ENST00000343638 WNT8BQ93098 351 aa19.56■□□□□ 0.72
UBTF-202ENST00000343638 CPXM1Q96SM3 734 aa19.56■□□□□ 0.72
UBTF-202ENST00000343638 EIF2AQ9BY44 585 aaKnown RBP19.56■□□□□ 0.72
UBTF-202ENST00000343638 GOLGA2P5Q9HBQ8 144 aa19.56■□□□□ 0.72
UBTF-202ENST00000343638 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.56■□□□□ 0.72
UBTF-202ENST00000343638 UBA6A0AVT1 1052 aaPredicted RBP19.56■□□□□ 0.72
UBTF-202ENST00000343638 ZSCAN5DPP0CG00 497 aa19.56■□□□□ 0.72
UBTF-202ENST00000343638 FASTKD1Q53R41 847 aaKnown RBP19.56■□□□□ 0.72
UBTF-202ENST00000343638 KCNT2Q6UVM3 1135 aa19.56■□□□□ 0.72
UBTF-202ENST00000343638 TRIM67Q6ZTA4 783 aa19.56■□□□□ 0.72
UBTF-202ENST00000343638 MON1BQ7L1V2 547 aa19.56■□□□□ 0.72
UBTF-202ENST00000343638 JOSD2Q8TAC2 188 aa19.56■□□□□ 0.72
UBTF-202ENST00000343638 CDH9Q9ULB4 789 aa19.56■□□□□ 0.72
UBTF-202ENST00000343638 SLC12A8A0AV02 714 aa19.56■□□□□ 0.72
UBTF-202ENST00000343638 DUPD1Q68J44 220 aa19.56■□□□□ 0.72
UBTF-202ENST00000343638 LVRNQ6Q4G3 990 aa19.56■□□□□ 0.72
UBTF-202ENST00000343638 AAASQ9NRG9 546 aa19.56■□□□□ 0.72
UBTF-202ENST00000343638 ADAMTS5Q9UNA0 930 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms