RNA–Protein interactions for RNA: ENST00000341697.7

SEMA6C-201, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 5,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-201ENST00000341697 FOXR2Q6PJQ5 311 aa20.25■□□□□ 0.83
SEMA6C-201ENST00000341697 DOLKQ9UPQ8 538 aa20.25■□□□□ 0.83
SEMA6C-201ENST00000341697 GIT1Q9Y2X7 761 aa20.25■□□□□ 0.83
SEMA6C-201ENST00000341697 GRK4P32298 578 aa20.25■□□□□ 0.83
SEMA6C-201ENST00000341697 LRRC6Q86X45 466 aa20.25■□□□□ 0.83
SEMA6C-201ENST00000341697 RMDN2Q96LZ7 410 aa20.25■□□□□ 0.83
SEMA6C-201ENST00000341697 KLF6Q99612 283 aaPredicted RBP20.25■□□□□ 0.83
SEMA6C-201ENST00000341697 PABPC3Q9H361 631 aaKnown RBP20.25■□□□□ 0.83
SEMA6C-201ENST00000341697 LRRC40Q9H9A6 602 aa20.25■□□□□ 0.83
SEMA6C-201ENST00000341697 SF3B1O75533 1304 aaKnown RBP eCLIP20.25■□□□□ 0.83
SEMA6C-201ENST00000341697 DDX5P17844 614 aaKnown RBP20.25■□□□□ 0.83
SEMA6C-201ENST00000341697 RPL9P32969 192 aaKnown RBP20.25■□□□□ 0.83
SEMA6C-201ENST00000341697 PPM1LQ5SGD2 360 aa20.25■□□□□ 0.83
SEMA6C-201ENST00000341697 HIPK4Q8NE63 616 aa20.25■□□□□ 0.83
SEMA6C-201ENST00000341697 ULBP1Q9BZM6 244 aa20.25■□□□□ 0.83
SEMA6C-201ENST00000341697 TOPAZ1Q8N9V7 1692 aa20.25■□□□□ 0.83
SEMA6C-201ENST00000341697 SUPT3HB4E1H0 165 aa20.25■□□□□ 0.83
SEMA6C-201ENST00000341697 SUPT3HO75486 399 aa20.25■□□□□ 0.83
SEMA6C-201ENST00000341697 ITGA7Q13683 1181 aa20.25■□□□□ 0.83
SEMA6C-201ENST00000341697 AARS2Q5JTZ9 985 aaKnown RBP20.25■□□□□ 0.83
SEMA6C-201ENST00000341697 USP17L7P0C7H9 530 aa20.24■□□□□ 0.83
SEMA6C-201ENST00000341697 KRT4P19013 534 aa20.24■□□□□ 0.83
SEMA6C-201ENST00000341697 MIIPQ5JXC2 388 aa20.24■□□□□ 0.83
SEMA6C-201ENST00000341697 WDR59Q6PJI9 974 aa20.24■□□□□ 0.83
SEMA6C-201ENST00000341697 FBXO36Q8NEA4 188 aa20.24■□□□□ 0.83
SEMA6C-201ENST00000341697 HELQQ8TDG4 1101 aa20.24■□□□□ 0.83
SEMA6C-201ENST00000341697 NT5MQ9NPB1 228 aa20.24■□□□□ 0.83
SEMA6C-201ENST00000341697 PCDHGB4Q9UN71 923 aa20.24■□□□□ 0.83
SEMA6C-201ENST00000341697 ENDOD1O94919 500 aa20.24■□□□□ 0.83
SEMA6C-201ENST00000341697 SPATA21Q7Z572 469 aa20.24■□□□□ 0.83
SEMA6C-201ENST00000341697 CIPCQ9C0C6 399 aa20.24■□□□□ 0.83
SEMA6C-201ENST00000341697 NMRK2Q9NPI5 230 aa20.24■□□□□ 0.83
SEMA6C-201ENST00000341697 MRPL17Q9NRX2 175 aaKnown RBP20.24■□□□□ 0.83
SEMA6C-201ENST00000341697 SMPD4Q9NXE4 827 aa20.24■□□□□ 0.83
SEMA6C-201ENST00000341697 NDE1Q9NXR1 346 aa20.24■□□□□ 0.83
SEMA6C-201ENST00000341697 CDH9Q9ULB4 789 aa20.24■□□□□ 0.83
SEMA6C-201ENST00000341697 ZNF142P52746 1687 aaPredicted RBP20.24■□□□□ 0.83
SEMA6C-201ENST00000341697 RAMP2O60895 175 aa20.24■□□□□ 0.83
SEMA6C-201ENST00000341697 RNASEH1O60930 286 aaKnown RBP20.24■□□□□ 0.83
SEMA6C-201ENST00000341697 AMPD2Q01433 879 aa20.24■□□□□ 0.83
SEMA6C-201ENST00000341697 E2F5Q15329 346 aa20.24■□□□□ 0.83
SEMA6C-201ENST00000341697 ZACNQ401N2 412 aa20.24■□□□□ 0.83
SEMA6C-201ENST00000341697 RETSATQ6NUM9 610 aa20.24■□□□□ 0.83
SEMA6C-201ENST00000341697 LPPQ93052 612 aa20.24■□□□□ 0.83
SEMA6C-201ENST00000341697 MAML3Q96JK9 1138 aa20.24■□□□□ 0.83
SEMA6C-201ENST00000341697 TSPAN18Q96SJ8 248 aa20.24■□□□□ 0.83
SEMA6C-201ENST00000341697 COL20A1Q9P218 1284 aa20.24■□□□□ 0.83
SEMA6C-201ENST00000341697 PCDHA3Q9Y5H8 950 aa20.24■□□□□ 0.83
SEMA6C-201ENST00000341697 HSD17B3P37058 310 aa20.24■□□□□ 0.83
SEMA6C-201ENST00000341697 TUBP50607 506 aa20.24■□□□□ 0.83
SEMA6C-201ENST00000341697 PHEXP78562 749 aa20.24■□□□□ 0.83
SEMA6C-201ENST00000341697 UGT3A1Q6NUS8 523 aa20.24■□□□□ 0.83
SEMA6C-201ENST00000341697 SERPINB12Q96P63 405 aa20.24■□□□□ 0.83
SEMA6C-201ENST00000341697 TRIM49D1C9J1S8 452 aa20.23■□□□□ 0.83
SEMA6C-201ENST00000341697 PJA2O43164 708 aa20.23■□□□□ 0.83
SEMA6C-201ENST00000341697 PEX10O60683 326 aa20.23■□□□□ 0.83
SEMA6C-201ENST00000341697 ARF4P18085 180 aaPredicted RBP20.23■□□□□ 0.83
SEMA6C-201ENST00000341697 VCPP55072 806 aaKnown RBP20.23■□□□□ 0.83
SEMA6C-201ENST00000341697 MARC1Q5VT66 337 aa20.23■□□□□ 0.83
SEMA6C-201ENST00000341697 LZTR1Q8N653 840 aa20.23■□□□□ 0.83
SEMA6C-201ENST00000341697 RBM22Q9NW64 420 aaKnown RBP eCLIP20.23■□□□□ 0.83
SEMA6C-201ENST00000341697 TGFB1I1O43294 461 aa20.23■□□□□ 0.83
SEMA6C-201ENST00000341697 DUSP11O75319 330 aaKnown RBP20.23■□□□□ 0.83
SEMA6C-201ENST00000341697 TTLL9Q3SXZ7 439 aa20.23■□□□□ 0.83
SEMA6C-201ENST00000341697 HNRNPLLQ8WVV9 542 aaKnown RBP20.23■□□□□ 0.83
SEMA6C-201ENST00000341697 PLA2G4CQ9UP65 541 aa20.23■□□□□ 0.83
SEMA6C-201ENST00000341697 OR5B17Q8NGF7 314 aa20.23■□□□□ 0.83
SEMA6C-201ENST00000341697 ADAM32Q8TC27 787 aa20.23■□□□□ 0.83
SEMA6C-201ENST00000341697 BRD8Q9H0E9 1235 aa20.23■□□□□ 0.83
SEMA6C-201ENST00000341697 ABCC13Q9NSE7 274 aa20.23■□□□□ 0.83
SEMA6C-201ENST00000341697 LTBP3Q9NS15 1303 aa20.23■□□□□ 0.83
SEMA6C-201ENST00000341697 E2F8A0AVK6 867 aa20.23■□□□□ 0.83
SEMA6C-201ENST00000341697 TMEM120BA0PK00 339 aa20.23■□□□□ 0.83
SEMA6C-201ENST00000341697 LARP7Q4G0J3 582 aaKnown RBP eCLIP20.23■□□□□ 0.83
SEMA6C-201ENST00000341697 ADCK2Q7Z695 626 aa20.23■□□□□ 0.83
SEMA6C-201ENST00000341697 C12orf56Q8IXR9 622 aa20.23■□□□□ 0.83
SEMA6C-201ENST00000341697 C18orf25Q96B23 403 aaPredicted RBP20.23■□□□□ 0.83
SEMA6C-201ENST00000341697 CELF6Q96J87 481 aaKnown RBP20.23■□□□□ 0.83
SEMA6C-201ENST00000341697 FAM105AQ9NUU6 356 aa20.23■□□□□ 0.83
SEMA6C-201ENST00000341697 LUC7L3O95232 432 aaKnown RBP20.22■□□□□ 0.83
SEMA6C-201ENST00000341697 MTFR1Q15390 333 aa20.22■□□□□ 0.83
SEMA6C-201ENST00000341697 CD99L2Q8TCZ2 262 aa20.22■□□□□ 0.83
SEMA6C-201ENST00000341697 HSFY1Q96LI6 401 aa20.22■□□□□ 0.83
SEMA6C-201ENST00000341697 FICDQ9BVA6 458 aa20.22■□□□□ 0.83
SEMA6C-201ENST00000341697 DRG1Q9Y295 367 aaKnown RBP20.22■□□□□ 0.83
SEMA6C-201ENST00000341697 NID2Q14112 1375 aa20.22■□□□□ 0.83
SEMA6C-201ENST00000341697 HEATR9A2RTY3 570 aa20.22■□□□□ 0.83
SEMA6C-201ENST00000341697 NPR3P17342 541 aa20.22■□□□□ 0.83
SEMA6C-201ENST00000341697 MIPP30301 263 aa20.22■□□□□ 0.83
SEMA6C-201ENST00000341697 FAM83EQ2M2I3 478 aa20.22■□□□□ 0.83
SEMA6C-201ENST00000341697 FAM71AQ8IYT1 594 aa20.22■□□□□ 0.83
SEMA6C-201ENST00000341697 COLGALT1Q8NBJ5 622 aa20.22■□□□□ 0.83
SEMA6C-201ENST00000341697 ADGRE3Q9BY15 652 aa20.22■□□□□ 0.83
SEMA6C-201ENST00000341697 NIFKQ9BYG3 293 aaKnown RBP20.22■□□□□ 0.83
SEMA6C-201ENST00000341697 ADA2Q9NZK5 511 aa20.22■□□□□ 0.83
SEMA6C-201ENST00000341697 LZTS3O60299 673 aaPredicted RBP20.22■□□□□ 0.83
SEMA6C-201ENST00000341697 OR1E1P30953 314 aa20.22■□□□□ 0.83
SEMA6C-201ENST00000341697 HDAC4P56524 1084 aa20.22■□□□□ 0.83
SEMA6C-201ENST00000341697 DENND1BQ6P3S1 775 aa20.22■□□□□ 0.83
SEMA6C-201ENST00000341697 KDM4CQ9H3R0 1056 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms