RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 GMEB2Q9UKD1 530 aa16.22■□□□□ 0.19
VAPA-201ENST00000340541 CPQQ9Y646 472 aa16.22■□□□□ 0.19
VAPA-201ENST00000340541 SPECC1L-ADORA2AF8WAN1 911 aa16.21■□□□□ 0.19
VAPA-201ENST00000340541 ARSAP15289 507 aa16.21■□□□□ 0.19
VAPA-201ENST00000340541 EEF1GP26641 437 aaKnown RBP16.21■□□□□ 0.19
VAPA-201ENST00000340541 CTHP32929 405 aa16.21■□□□□ 0.19
VAPA-201ENST00000340541 BCAT1P54687 386 aa16.21■□□□□ 0.19
VAPA-201ENST00000340541 RUNX3Q13761 415 aa16.21■□□□□ 0.19
VAPA-201ENST00000340541 CNGA2Q16280 664 aa16.21■□□□□ 0.19
VAPA-201ENST00000340541 ITPRIPL2Q3MIP1 535 aa16.21■□□□□ 0.19
VAPA-201ENST00000340541 LAIR1Q6GTX8 287 aa16.21■□□□□ 0.19
VAPA-201ENST00000340541 UBA3Q8TBC4 463 aa16.21■□□□□ 0.19
VAPA-201ENST00000340541 OSCP1Q8WVF1 389 aa16.21■□□□□ 0.19
VAPA-201ENST00000340541 TLR8Q9NR97 1041 aaKnown RBP16.21■□□□□ 0.19
VAPA-201ENST00000340541 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.21■□□□□ 0.19
VAPA-201ENST00000340541 WNT6Q9Y6F9 365 aa16.21■□□□□ 0.19
VAPA-201ENST00000340541 A0A1W2PQH9 124 aa16.2■□□□□ 0.18
VAPA-201ENST00000340541 BECN2A8MW95 431 aa16.2■□□□□ 0.18
VAPA-201ENST00000340541 XPO1O14980 1071 aaKnown RBP16.2■□□□□ 0.18
VAPA-201ENST00000340541 TLR5O60602 858 aa16.2■□□□□ 0.18
VAPA-201ENST00000340541 GABBR2O75899 941 aa16.2■□□□□ 0.18
VAPA-201ENST00000340541 TBX18O95935 607 aa16.2■□□□□ 0.18
VAPA-201ENST00000340541 MBL2P11226 248 aaPredicted RBP16.2■□□□□ 0.18
VAPA-201ENST00000340541 PRKCSHP14314 528 aaPredicted RBP16.2■□□□□ 0.18
VAPA-201ENST00000340541 TGM1P22735 817 aa16.2■□□□□ 0.18
VAPA-201ENST00000340541 BRD2P25440 801 aaKnown RBP16.2■□□□□ 0.18
VAPA-201ENST00000340541 PLA2G4AP47712 749 aa16.2■□□□□ 0.18
VAPA-201ENST00000340541 TYRO3Q06418 890 aa16.2■□□□□ 0.18
VAPA-201ENST00000340541 BST2Q10589 180 aaKnown RBP16.2■□□□□ 0.18
VAPA-201ENST00000340541 KCNMA1Q12791 1236 aa16.2■□□□□ 0.18
VAPA-201ENST00000340541 PDGFRLQ15198 375 aa16.2■□□□□ 0.18
VAPA-201ENST00000340541 EML3Q32P44 896 aa16.2■□□□□ 0.18
VAPA-201ENST00000340541 CC2D1AQ6P1N0 951 aaPredicted RBP16.2■□□□□ 0.18
VAPA-201ENST00000340541 ENOSF1Q7L5Y1 443 aa16.2■□□□□ 0.18
VAPA-201ENST00000340541 BHLHA9Q7RTU4 235 aa16.2■□□□□ 0.18
VAPA-201ENST00000340541 KIAA1958Q8N8K9 716 aa16.2■□□□□ 0.18
VAPA-201ENST00000340541 LINC00597Q9H2U6 94 aa16.2■□□□□ 0.18
VAPA-201ENST00000340541 FANCLQ9NW38 375 aa16.2■□□□□ 0.18
VAPA-201ENST00000340541 HESX1Q9UBX0 185 aa16.2■□□□□ 0.18
VAPA-201ENST00000340541 FOXD2O60548 495 aaPredicted RBP16.19■□□□□ 0.18
VAPA-201ENST00000340541 RETP07949 1114 aa16.19■□□□□ 0.18
VAPA-201ENST00000340541 SETSIPP0DME0 302 aa16.19■□□□□ 0.18
VAPA-201ENST00000340541 TKTL1P51854 596 aa16.19■□□□□ 0.18
VAPA-201ENST00000340541 MFAP3P55082 362 aa16.19■□□□□ 0.18
VAPA-201ENST00000340541 GAS6Q14393 721 aa16.19■□□□□ 0.18
VAPA-201ENST00000340541 NCAPHQ15003 741 aa16.19■□□□□ 0.18
VAPA-201ENST00000340541 PM20D1Q6GTS8 502 aa16.19■□□□□ 0.18
VAPA-201ENST00000340541 CAVIN1Q6NZI2 390 aaKnown RBP16.19■□□□□ 0.18
VAPA-201ENST00000340541 ZNF276Q8N554 614 aa16.19■□□□□ 0.18
VAPA-201ENST00000340541 TTC16Q8NEE8 873 aa16.19■□□□□ 0.18
VAPA-201ENST00000340541 SLC35F5Q8WV83 523 aa16.19■□□□□ 0.18
VAPA-201ENST00000340541 KCTD13Q8WZ19 329 aa16.19■□□□□ 0.18
VAPA-201ENST00000340541 SHC3Q92529 594 aa16.19■□□□□ 0.18
VAPA-201ENST00000340541 WBP2Q969T9 261 aa16.19■□□□□ 0.18
VAPA-201ENST00000340541 FAM81BQ96LP2 452 aa16.19■□□□□ 0.18
VAPA-201ENST00000340541 HSD3B7Q9H2F3 369 aa16.19■□□□□ 0.18
VAPA-201ENST00000340541 ACP6Q9NPH0 428 aa16.19■□□□□ 0.18
VAPA-201ENST00000340541 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.19■□□□□ 0.18
VAPA-201ENST00000340541 DUS2Q9NX74 493 aaKnown RBP16.19■□□□□ 0.18
VAPA-201ENST00000340541 TAB2Q9NYJ8 693 aa16.19■□□□□ 0.18
VAPA-201ENST00000340541 CFAP97Q9P2B7 532 aa16.19■□□□□ 0.18
VAPA-201ENST00000340541 MED19A0JLT2 244 aaPredicted RBP16.18■□□□□ 0.18
VAPA-201ENST00000340541 SCAMP3O14828 347 aaKnown RBP16.18■□□□□ 0.18
VAPA-201ENST00000340541 GREM1O60565 184 aa16.18■□□□□ 0.18
VAPA-201ENST00000340541 RARGP13631 454 aa16.18■□□□□ 0.18
VAPA-201ENST00000340541 KRT5P13647 590 aa16.18■□□□□ 0.18
VAPA-201ENST00000340541 IFNAR2P48551 515 aa16.18■□□□□ 0.18
VAPA-201ENST00000340541 PSEN1P49768 467 aa16.18■□□□□ 0.18
VAPA-201ENST00000340541 SLC8A3P57103 927 aa16.18■□□□□ 0.18
VAPA-201ENST00000340541 SATB1Q01826 763 aa16.18■□□□□ 0.18
VAPA-201ENST00000340541 MYL5Q02045 173 aa16.18■□□□□ 0.18
VAPA-201ENST00000340541 CCINQ13939 588 aa16.18■□□□□ 0.18
VAPA-201ENST00000340541 KRT31Q15323 416 aa16.18■□□□□ 0.18
VAPA-201ENST00000340541 STILQ15468 1287 aa16.18■□□□□ 0.18
VAPA-201ENST00000340541 PMF1Q6P1K2 205 aa16.18■□□□□ 0.18
VAPA-201ENST00000340541 KLHDC10Q6PID8 442 aa16.18■□□□□ 0.18
VAPA-201ENST00000340541 LONP2Q86WA8 852 aa16.18■□□□□ 0.18
VAPA-201ENST00000340541 RTKNQ9BST9 563 aa16.18■□□□□ 0.18
VAPA-201ENST00000340541 KLF16Q9BXK1 252 aaPredicted RBP16.18■□□□□ 0.18
VAPA-201ENST00000340541 ULBP1Q9BZM6 244 aa16.18■□□□□ 0.18
VAPA-201ENST00000340541 ECT2Q9H8V3 914 aa16.18■□□□□ 0.18
VAPA-201ENST00000340541 CLIC5Q9NZA1 410 aa16.18■□□□□ 0.18
VAPA-201ENST00000340541 NAGPAQ9UK23 515 aa16.18■□□□□ 0.18
VAPA-201ENST00000340541 NUDT5Q9UKK9 219 aa16.18■□□□□ 0.18
VAPA-201ENST00000340541 DNAH14Q0VDD8 3507 aa16.17■□□□□ 0.18
VAPA-201ENST00000340541 K7ESF4 209 aa16.17■□□□□ 0.18
VAPA-201ENST00000340541 M0QYV0 167 aa16.17■□□□□ 0.18
VAPA-201ENST00000340541 ZBED1O96006 694 aa16.17■□□□□ 0.18
VAPA-201ENST00000340541 ZNF18P17022 549 aa16.17■□□□□ 0.18
VAPA-201ENST00000340541 ATP5C1P36542 298 aaKnown RBP16.17■□□□□ 0.18
VAPA-201ENST00000340541 ATXN1P54253 815 aaKnown RBP16.17■□□□□ 0.18
VAPA-201ENST00000340541 AMPD2Q01433 879 aa16.17■□□□□ 0.18
VAPA-201ENST00000340541 ADIGQ0VDE8 80 aa16.17■□□□□ 0.18
VAPA-201ENST00000340541 ARHGAP44Q17R89 818 aa16.17■□□□□ 0.18
VAPA-201ENST00000340541 KLHL40Q2TBA0 621 aa16.17■□□□□ 0.18
VAPA-201ENST00000340541 GAB4Q2WGN9 574 aa16.17■□□□□ 0.18
VAPA-201ENST00000340541 SMYD5Q6GMV2 418 aa16.17■□□□□ 0.18
VAPA-201ENST00000340541 DDX42Q86XP3 938 aaKnown RBP eCLIP16.17■□□□□ 0.18
VAPA-201ENST00000340541 NDRG1Q92597 394 aaKnown RBP16.17■□□□□ 0.18
VAPA-201ENST00000340541 ATP2A3Q93084 1043 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms